Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 1.2e-192 676.4 355 100.0
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 7.5e-171 604.0 353 87.8
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 2.3e-167 592.4 353 86.1
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 8.9e-156 553.9 355 82.3
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 3.2e-153 545.4 355 80.6
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 5.6e-150 534.6 355 77.5
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 5.8e-147 524.6 356 76.7
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 2.9e-146 522.3 346 77.7
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 3.8e-146 521.9 338 78.4
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 1.9e-145 519.6 355 76.3
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 4.2e-145 518.5 359 76.0
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 9.2e-145 517.3 349 76.5
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 2.7e-144 515.8 332 79.5
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 7.8e-144 514.2 335 78.2
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 1.0e-143 513.8 357 74.2
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 1.3e-143 513.5 357 75.1
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 3.0e-143 512.3 340 76.8
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 2.5e-142 509.2 340 76.5
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 3.3e-142 508.8 336 76.8
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 4.3e-142 508.4 331 77.6
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 9.6e-142 507.3 358 75.4
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 1.1e-140 503.8 336 76.8
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 1.8e-140 503.1 340 75.0
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 2.4e-140 502.7 344 75.3
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 4.0e-140 501.9 338 75.1
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 4.0e-140 501.9 386 69.7
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 6.9e-140 501.1 371 72.5
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 9.0e-140 500.7 357 72.0
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 9.0e-140 500.7 353 73.1
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 1.2e-139 500.4 338 73.7
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 1.5e-139 500.0 339 74.6
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 2.6e-139 499.2 373 70.5
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 7.6e-139 497.7 358 72.9
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 9.9e-139 497.3 332 76.2
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 1.7e-138 496.5 361 72.3
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 2.9e-138 495.7 339 74.3
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 4.9e-138 495.0 358 73.5
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 6.4e-138 494.6 332 76.2
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 8.4e-138 494.2 357 73.7
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 1.9e-137 493.0 358 72.9
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 2.4e-137 492.7 331 75.8
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 3.2e-137 492.3 339 74.0
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 1.6e-136 490.0 332 75.3
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.1e-136 489.6 332 75.6
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 2.1e-136 489.6 358 73.2
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 2.7e-136 489.2 358 72.9
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 2.7e-136 489.2 361 70.9
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 2.7e-136 489.2 358 73.2
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 3.5e-136 488.8 336 75.9
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 1.3e-135 486.9 361 70.6
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 1.7e-135 486.5 361 70.9
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 6.6e-135 484.6 358 72.3
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 8.7e-135 484.2 344 71.2
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 1.1e-134 483.8 336 73.2
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 1.1e-134 483.8 336 73.2
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 1.5e-134 483.4 344 71.2
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 1.5e-134 483.4 344 71.2
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 1.5e-134 483.4 344 71.2
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 1.5e-134 483.4 349 73.4
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 2.5e-134 482.6 344 71.2
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 3.3e-134 482.3 362 70.7
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 3.3e-134 482.3 333 76.0
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 7.3e-134 481.1 359 71.9
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 9.6e-134 480.7 353 72.0
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 1.6e-133 479.9 339 71.7
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 2.1e-133 479.6 344 73.3
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 3.6e-133 478.8 344 73.0
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 4.8e-133 478.4 344 71.8
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 4.8e-133 478.4 339 72.9
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 4.8e-133 478.4 339 72.3
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 1.4e-132 476.9 333 74.2
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 2.4e-132 476.1 335 72.2
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 2.4e-132 476.1 336 72.9
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 1.5e-131 473.4 359 69.9
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 3.4e-131 472.2 333 72.7
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 1.3e-130 470.3 348 72.4
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 2.2e-130 469.5 360 68.6
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 2.9e-130 469.2 337 71.5
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 5.4e-129 464.9 360 70.3
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 2.1e-128 463.0 354 69.8
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 2.1e-128 463.0 346 70.8
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 2.7e-128 462.6 328 73.8
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 3.5e-128 462.2 356 67.7
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 7.9e-128 461.1 333 73.6
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 3.3e-126 455.7 329 70.8
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 2.5e-121 439.5 349 68.8
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 7.9e-120 434.5 269 81.8
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 1.8e-119 433.3 298 75.5
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 3.3e-118 429.1 269 80.3
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 1.1e-108 397.5 329 58.4
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 1.3e-106 390.6 350 57.1
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 4.6e-104 382.1 357 59.1
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 6.9e-100 368.2 273 68.9
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 1.5e-99 367.1 329 59.0
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 9.7e-86 321.2 266 66.9
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 6.5e-82 308.5 268 62.3
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 1.2e-80 304.3 265 59.2
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 4.5e-75 285.8 348 46.6
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 8.8e-71 271.6 270 55.9
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 5.7e-70 268.9 228 66.7
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 7.5e-70 268.5 333 45.3
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 1.4e-63 247.7 279 50.5
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 2.3e-63 246.9 357 43.7
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 8.9e-63 245.0 144 84.7
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 4.9e-61 239.2 353 45.6
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 1.1e-60 238.0 193 65.3
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.3e-58 231.1 191 63.9
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 4.9e-53 212.6 186 64.5
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 7.5e-46 188.7 184 54.9
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 9.2e-44 181.8 137 62.8
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 1.6e-43 181.0 159 63.5
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 6.8e-39 165.6 91 92.3
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 1.5e-38 164.5 262 42.7
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.6e-38 163.7 114 71.9
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 1.9e-28 131.0 131 49.6
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 5.6e-25 119.4 66 90.9
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 1.2e-22 111.7 121 56.2
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 9.9e-22 108.6 57 93.0
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 7.9e-19 99.0 86 55.8
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 1.3e-13 81.6 43 95.3
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 3.8e-13 80.1 46 87.0
Zm00001eb241410 Zea mays HOM05D006520 ORTHO05D442212 1.2e-06 58.5 46 58.7


User provided reference genes

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