Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.06g182860 Amaranthus hybridus HOM05D000620 ORTHO05D000537 7.0e-210 733.8 393 100.0
EL10Ac4g07666 Beta vulgaris HOM05D000620 ORTHO05D000537 1.2e-47 194.9 418 35.2
Ah.04g165740 Amaranthus hybridus HOM05D000620 ORTHO05D000537 3.7e-46 189.9 387 38.0
EL10Ac4g07663 Beta vulgaris HOM05D000620 ORTHO05D000537 2.4e-45 187.2 438 34.2
CSS0034308 Camellia sinensis var. sinensis HOM05D000620 ORTHO05D000537 3.1e-40 170.2 414 30.7
CSS0007781 Camellia sinensis var. sinensis HOM05D000620 ORTHO05D000537 9.9e-39 165.2 428 30.1
CSS0017051 Camellia sinensis var. sinensis HOM05D000620 ORTHO05D000537 9.9e-39 165.2 414 30.2
CSS0017667 Camellia sinensis var. sinensis HOM05D000620 ORTHO05D000537 9.9e-39 165.2 414 30.2
CSS0048090 Camellia sinensis var. sinensis HOM05D000620 ORTHO05D000537 9.9e-39 165.2 414 30.2
CSS0048700 Camellia sinensis var. sinensis HOM05D000620 ORTHO05D000537 3.8e-38 163.3 407 30.2
CSS0018147 Camellia sinensis var. sinensis HOM05D000620 ORTHO05D000537 4.9e-38 162.9 423 30.7
vmacro07853 Vaccinium macrocarpon HOM05D000620 ORTHO05D000537 2.1e-36 157.5 418 31.6
Zm00001eb411520 Zea mays HOM05D000620 ORTHO05D000537 2.1e-36 157.5 452 29.2
vmacro07851 Vaccinium macrocarpon HOM05D000620 ORTHO05D000537 7.8e-36 155.6 432 29.9
CSS0012787 Camellia sinensis var. sinensis HOM05D000620 ORTHO05D000537 1.0e-35 155.2 420 30.0
CSS0001261 Camellia sinensis var. sinensis HOM05D000620 ORTHO05D000537 1.3e-35 154.8 416 29.1
vmacro07883 Vaccinium macrocarpon HOM05D000620 ORTHO05D000537 3.0e-35 153.7 427 30.2
Zm00001eb418460 Zea mays HOM05D000620 ORTHO05D000537 5.1e-35 152.9 452 28.5
Manes.08G074800 Manihot esculenta HOM05D000620 ORTHO05D000537 4.3e-34 149.8 414 30.9
Hma1.2p1_0057F.1_g031975 Hydrangea macrophylla HOM05D000620 ORTHO05D000537 2.1e-33 147.5 415 30.4
Manes.08G073900 Manihot esculenta HOM05D000620 ORTHO05D000537 1.8e-32 144.4 416 30.0
Manes.08G075355 Manihot esculenta HOM05D000620 ORTHO05D000537 2.4e-32 144.1 430 29.5
Manes.08G075015 Manihot esculenta HOM05D000620 ORTHO05D000537 3.1e-32 143.7 430 29.3
CANSAT78G0347 Cannabis sativa HOM05D000620 ORTHO05D000537 3.4e-31 140.2 404 29.0
DCAR_003579 Daucus carota HOM05D000620 ORTHO05D000537 9.9e-31 138.7 440 30.0
Manes.08G075695 Manihot esculenta HOM05D000620 ORTHO05D000537 1.7e-30 137.9 430 28.8
Hma1.2p1_0299F.1_g117760 Hydrangea macrophylla HOM05D000620 ORTHO05D000537 2.2e-30 137.5 429 28.4
Manes.18G086601 Manihot esculenta HOM05D000620 ORTHO05D000537 1.1e-29 135.2 416 30.0
DCAR_003583 Daucus carota HOM05D000620 ORTHO05D000537 3.5e-28 130.2 419 29.8
vmacro07882 Vaccinium macrocarpon HOM05D000620 ORTHO05D000537 1.7e-27 127.9 410 28.3
PSO675G8554 Papaver somniferum HOM05D000620 ORTHO05D000537 7.3e-26 122.5 411 29.2
DCAR_029340 Daucus carota HOM05D000620 ORTHO05D000537 1.3e-25 121.7 439 28.0
EL10Ac4g07671 Beta vulgaris HOM05D000620 ORTHO05D000537 4.0e-24 116.7 445 25.8
PSO675G5347 Papaver somniferum HOM05D000620 ORTHO05D000537 2.2e-22 110.9 425 28.0
PSO724G0208 Papaver somniferum HOM05D000620 ORTHO05D000537 3.5e-20 103.6 413 25.7
PSO724G0259 Papaver somniferum HOM05D000620 ORTHO05D000537 3.0e-19 100.5 386 28.0
PSO675G2344 Papaver somniferum HOM05D000620 ORTHO05D000537 3.9e-19 100.1 415 25.8
PSO675G2341 Papaver somniferum HOM05D000620 ORTHO05D000537 1.5e-18 98.2 422 27.0
PSO675G3359 Papaver somniferum HOM05D000620 ORTHO05D000537 2.8e-17 94.0 390 26.7
AUR62025905 Chenopodium quinoa HOM05D000620 ORTHO05D000537 3.7e-17 93.6 324 25.9
PSO675G2057 Papaver somniferum HOM05D000620 ORTHO05D000537 6.9e-16 89.4 411 26.5
Os01g0640200 Oryza sativa ssp. japonica HOM05D000620 ORTHO05D000537 2.0e-15 87.8 439 26.4
AUR62020329 Chenopodium quinoa HOM05D000620 ORTHO05D000537 9.9e-15 85.5 430 25.6
AUR62020331 Chenopodium quinoa HOM05D000620 ORTHO05D000537 9.9e-15 85.5 430 25.6
AUR62020333 Chenopodium quinoa HOM05D000620 ORTHO05D000537 1.3e-14 85.1 458 24.9
AUR62044317 Chenopodium quinoa HOM05D000620 ORTHO05D000537 1.3e-14 85.1 458 24.9
CSS0050049 Camellia sinensis var. sinensis HOM05D000620 ORTHO05D000537 1.7e-14 84.7 160 30.0
EL10Ac4g08010 Beta vulgaris HOM05D000620 ORTHO05D000537 8.4e-14 82.4 345 24.9
Hund23281 Selenicereus undatus HOM05D000620 ORTHO05D000537 8.4e-14 82.4 292 25.7
PSO541G4737 Papaver somniferum HOM05D000620 ORTHO05D000537 7.1e-13 79.3 222 28.8
DCAR_003575 Daucus carota HOM05D000308 ORTHO05D000537 2.7e-12 77.4 295 26.4
Os03g0403600 Oryza sativa ssp. japonica HOM05D000620 ORTHO05D000537 6.0e-12 76.3 325 26.2
Hund23186 Selenicereus undatus HOM05D000620 ORTHO05D000537 7.9e-12 75.9 251 28.7
PSO675G2563 Papaver somniferum HOM05D000620 ORTHO05D000537 1.3e-11 75.1 330 25.8
CSS0038599 Camellia sinensis var. sinensis HOM05D000620 ORTHO05D000537 2.3e-11 74.3 243 26.3
Ah.06g182170 Amaranthus hybridus HOM05D000620 ORTHO05D000537 6.7e-11 72.8 236 29.7
Ah.04g166310 Amaranthus hybridus HOM05D000620 ORTHO05D000537 8.7e-11 72.4 235 26.8
Ah.04g166320 Amaranthus hybridus HOM05D000620 ORTHO05D000537 1.5e-10 71.6 180 28.3
FAN16G2208 Fragaria x ananassa HOM05D000620 ORTHO05D000537 2.5e-10 70.9 408 24.3
FvH4_3g11740 Fragaria vesca HOM05D000620 ORTHO05D000537 4.3e-10 70.1 405 24.2
Os12g0431700 Oryza sativa ssp. japonica HOM05D000620 ORTHO05D000537 1.6e-09 68.2 174 32.2
Migut.F01900 Erythranthe guttata HOM05D000620 ORTHO05D000537 2.1e-09 67.8 409 22.0
PSO675G4964 Papaver somniferum HOM05D000620 ORTHO05D000537 4.8e-09 66.6 153 31.4
Migut.F01898 Erythranthe guttata HOM05D000620 ORTHO05D000537 8.2e-09 65.9 415 22.2
FvH4_3g11770 Fragaria vesca HOM05D000620 ORTHO05D000537 8.2e-09 65.9 418 23.2
EL10Ac4g08006 Beta vulgaris HOM05D000620 ORTHO05D000537 1.1e-08 65.5 327 27.8
RcHm_v2.0_Chr5g0019121 Rosa chinensis HOM05D000620 ORTHO05D000537 2.4e-08 64.3 417 23.0
Migut.F01899 Erythranthe guttata HOM05D000620 ORTHO05D000537 5.3e-08 63.2 400 22.2
FvH4_3g11693 Fragaria vesca HOM05D000620 ORTHO05D000537 5.3e-08 63.2 414 22.7
Migut.F01896 Erythranthe guttata HOM05D000620 ORTHO05D000537 1.2e-07 62.0 403 22.6
RcHm_v2.0_Chr5g0019101 Rosa chinensis HOM05D000620 ORTHO05D000537 1.2e-07 62.0 407 23.3
FAN21G2332 Fragaria x ananassa HOM05D000620 ORTHO05D000537 1.5e-07 61.6 408 22.8
FAN16G3324 Fragaria x ananassa HOM05D000620 ORTHO05D000537 3.4e-07 60.5 411 22.9
RcHm_v2.0_Chr5g0019201 Rosa chinensis HOM05D000620 ORTHO05D000537 1.3e-06 58.5 416 23.1
Ca_01380_v3 Cicer arietinum L. HOM05D000620 ORTHO05D000537 2.9e-06 57.4 394 22.1
Ca_01396_v3 Cicer arietinum L. HOM05D000620 ORTHO05D000537 2.9e-06 57.4 394 22.1
Migut.F01897 Erythranthe guttata HOM05D000620 ORTHO05D000537 2.9e-06 57.4 363 22.3
Migut.F01903 Erythranthe guttata HOM05D000620 ORTHO05D000537 3.8e-06 57.0 378 21.4
Migut.F01905 Erythranthe guttata HOM05D000620 ORTHO05D000537 3.8e-06 57.0 363 22.9
Lalb_Chr24g0394741 Lupinus albus HOM05D000620 ORTHO05D000537 3.8e-06 57.0 393 21.4
Atru.chr3.3602 Acer truncatum HOM05D000620 ORTHO05D000537 4.9e-06 56.6 407 20.6
Psat5g278840 Pisum sativum HOM05D000620 ORTHO05D000537 4.9e-06 56.6 415 21.7
Sp1g06690 Schrenkiella parvula HOM05D000620 ORTHO05D000537 4.9e-06 56.6 421 22.6
SGA_v2.0_scaffold180G39641 Striga asiatica HOM05D000620 ORTHO05D000537 4.9e-06 56.6 294 24.8
Oeu032434.1 Olea europaea HOM05D000620 ORTHO05D000537 6.5e-06 56.2 349 23.5
Cpa.g.sc129.24 Carica papaya HOM05D000620 ORTHO05D000537 8.4e-06 55.8 339 22.1
FAN16G1899 Fragaria x ananassa HOM05D000620 ORTHO05D000537 8.4e-06 55.8 417 22.3
THA.LOC104801519 Tarenaya hassleriana HOM05D000620 ORTHO05D000537 8.4e-06 55.8 424 23.1


User provided reference genes

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