Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.06g182710 Amaranthus hybridus HOM05D010117 ORTHO05D012431 2.7e-307 1057.7 510 100.0
Ah.06g182740 Amaranthus hybridus HOM05D010117 ORTHO05D012431 1.7e-245 852.4 445 92.6
Ah.06g182760 Amaranthus hybridus HOM05D010117 ORTHO05D012431 1.7e-200 703.0 515 73.2
Ah.06g182690 Amaranthus hybridus HOM05D010117 ORTHO05D012431 6.5e-192 674.5 477 74.0
Ah.06g182680 Amaranthus hybridus HOM05D010117 ORTHO05D012431 1.5e-188 663.3 514 68.9
Ah.06g182790 Amaranthus hybridus HOM05D010117 ORTHO05D012431 2.3e-173 612.8 516 64.7
Ah.06g182700 Amaranthus hybridus HOM05D010117 ORTHO05D012431 7.7e-169 597.8 485 66.2
Ah.06g182750 Amaranthus hybridus HOM05D010117 ORTHO05D012431 1.2e-166 590.5 494 64.2
Ah.06g182720 Amaranthus hybridus HOM05D010117 ORTHO05D012431 2.9e-139 499.6 522 56.9
Ah.06g182780 Amaranthus hybridus HOM05D010117 ORTHO05D012431 9.5e-135 484.6 489 57.9
Ah.06g182730 Amaranthus hybridus HOM05D010117 ORTHO05D012431 1.7e-123 447.2 394 63.2
Ah.06g182660 Amaranthus hybridus HOM05D010117 ORTHO05D012431 2.2e-67 260.8 504 36.9
Ah.06g182670 Amaranthus hybridus HOM05D010117 ORTHO05D012431 5.0e-67 259.6 487 38.6
AUR62020403 Chenopodium quinoa HOM05D010117 ORTHO05D012431 5.5e-58 229.6 498 33.3
AUR62030073 Chenopodium quinoa HOM05D010117 ORTHO05D012431 8.9e-40 169.1 525 30.7
AUR62020837 Chenopodium quinoa HOM05D010117 ORTHO05D012431 5.0e-35 153.3 492 31.1
AUR62039086 Chenopodium quinoa HOM05D010117 ORTHO05D012431 5.2e-32 143.3 490 27.6
AUR62018582 Chenopodium quinoa HOM05D010117 ORTHO05D012431 8.9e-32 142.5 497 29.0
AUR62038226 Chenopodium quinoa HOM05D010117 ORTHO05D012431 1.1e-21 109.0 472 27.5
AUR62030075 Chenopodium quinoa HOM05D010117 ORTHO05D012431 2.5e-18 97.8 119 45.4
Ah.06g182770 Amaranthus hybridus HOM05D010117 ORTHO05D060300 1.1e-13 82.4 137 39.4
TPR.G28385 Trifolium pratense HOM05D000151 ORTHO05D000074 1.1e-13 82.4 266 26.7
Cfa007044 Carpinus fangiana HOM05D000151 ORTHO05D000074 3.9e-11 73.9 155 36.1
Haze_21631 Corylus avellana HOM05D000151 ORTHO05D000074 9.6e-10 69.3 270 24.1
Haze_03688 Corylus avellana HOM05D002155 ORTHO05D002215 1.3e-09 68.9 159 30.8
Nitab4.5_0003603g0140 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.3e-09 68.9 113 31.0
PGSC0003DMG400018632 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.8e-09 67.8 113 32.7
Peaxi162Scf00300g00317 Petunia axillaris HOM05D000151 ORTHO05D000074 4.8e-09 67.0 152 32.2
Haze_03686 Corylus avellana HOM05D000151 ORTHO05D000074 6.2e-09 66.6 276 26.1
Haze_21630 Corylus avellana HOM05D000151 ORTHO05D000074 8.1e-09 66.2 159 27.7
DCAR_022831 Daucus carota HOM05D000151 ORTHO05D000074 1.4e-08 65.5 389 24.9
Nitab4.5_0003679g0070 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.4e-08 65.5 113 30.1
Sc18g0006120 Simmondsia chinensis HOM05D000151 ORTHO05D000074 1.4e-08 65.5 119 34.5
Dinv08540 Davidia involucrata HOM05D000151 ORTHO05D000074 2.4e-08 64.7 165 29.7
Sopen01g053970 Solanum pennellii HOM05D000151 ORTHO05D000074 2.4e-08 64.7 113 30.1
Cfa007042 Carpinus fangiana HOM05D000151 ORTHO05D000074 3.1e-08 64.3 158 29.7
Solyc01g111920.3 Solanum lycopersicum HOM05D000151 ORTHO05D000074 3.1e-08 64.3 113 30.1
EL10Ac2g02955 Beta vulgaris HOM05D000151 ORTHO05D000074 4.0e-08 63.9 168 30.4
CAN.G1235.35 Capsicum annuum HOM05D000151 ORTHO05D000074 5.3e-08 63.5 121 33.1
Peaxi162Scf00300g00316 Petunia axillaris HOM05D000151 ORTHO05D000074 6.9e-08 63.2 152 30.9
Cfa007043 Carpinus fangiana HOM05D000151 ORTHO05D000074 9.0e-08 62.8 152 30.3
Potri.005G105100 Populus trichocarpa HOM05D000151 ORTHO05D000074 9.0e-08 62.8 194 28.9
AUR62015813 Chenopodium quinoa HOM05D010117 ORTHO05D012431 2.0e-07 61.6 202 27.7
Potri.004G179685 Populus trichocarpa HOM05D000151 ORTHO05D000074 2.0e-07 61.6 113 31.0
Nn5g30875 Nelumbo nucifera HOM05D000151 ORTHO05D000074 4.4e-07 60.5 117 33.3
QL06p052381 Quercus lobata HOM05D000151 ORTHO05D000074 7.6e-07 59.7 155 30.3
QL06p052388 Quercus lobata HOM05D000151 ORTHO05D000074 7.6e-07 59.7 261 24.5
Solyc11g005160.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 7.6e-07 59.7 161 24.8
TPR.G32022 Trifolium pratense HOM05D000151 ORTHO05D000074 7.6e-07 59.7 247 22.7
Peaxi162Scf00300g00043 Petunia axillaris HOM05D000151 ORTHO05D000074 9.9e-07 59.3 150 30.7
Sabra04G0121100 Salix brachista HOM05D000151 ORTHO05D000074 9.9e-07 59.3 110 33.6
Haze_02069 Corylus avellana HOM05D000151 ORTHO05D000074 1.3e-06 58.9 116 32.8
QL06p052352 Quercus lobata HOM05D000151 ORTHO05D000074 1.7e-06 58.5 168 30.4
Eucgr.I01468 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.2e-06 58.2 114 34.2
Eucgr.J02501 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.9e-06 57.8 165 31.5
Psat4g103120 Pisum sativum HOM05D000151 ORTHO05D000074 2.9e-06 57.8 154 27.3
Actinidia20542 Actinidia chinensis HOM05D000151 ORTHO05D000074 3.8e-06 57.4 123 29.3
Eucgr.J02505 Eucalyptus grandis HOM05D000151 ORTHO05D000074 3.8e-06 57.4 123 28.5
Medtr8g074610 Medicago truncatula HOM05D000151 ORTHO05D000074 4.9e-06 57.0 249 22.9
Prupe.7G176500 Prunus persica HOM05D000151 ORTHO05D000074 4.9e-06 57.0 160 32.5
arahy.Tifrunner.gnm1.ann1.29PSUQ Arachis hypogaea HOM05D000151 ORTHO05D000074 8.4e-06 56.2 164 26.8
QL06p052385 Quercus lobata HOM05D000151 ORTHO05D000074 8.4e-06 56.2 159 28.3


User provided reference genes

Program Settings