Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.06g182660 Amaranthus hybridus HOM05D010117 ORTHO05D012431 2.6e-244 848.2 405 100.0
Ah.06g182670 Amaranthus hybridus HOM05D010117 ORTHO05D012431 5.2e-184 647.9 399 81.2
Ah.06g182750 Amaranthus hybridus HOM05D010117 ORTHO05D012431 2.2e-81 307.0 507 39.8
Ah.06g182760 Amaranthus hybridus HOM05D010117 ORTHO05D012431 3.8e-78 296.2 507 39.3
Ah.06g182720 Amaranthus hybridus HOM05D010117 ORTHO05D012431 1.5e-74 284.3 488 37.9
Ah.06g182790 Amaranthus hybridus HOM05D010117 ORTHO05D012431 1.5e-74 284.3 495 38.6
Ah.06g182780 Amaranthus hybridus HOM05D010117 ORTHO05D012431 1.3e-70 271.2 466 37.3
Ah.06g182680 Amaranthus hybridus HOM05D010117 ORTHO05D012431 4.2e-69 266.2 310 50.3
Ah.06g182690 Amaranthus hybridus HOM05D010117 ORTHO05D012431 9.4e-69 265.0 308 49.7
Ah.06g182710 Amaranthus hybridus HOM05D010117 ORTHO05D012431 1.6e-68 264.2 504 36.9
Ah.06g182700 Amaranthus hybridus HOM05D010117 ORTHO05D012431 2.8e-65 253.4 316 47.2
AUR62020403 Chenopodium quinoa HOM05D010117 ORTHO05D012431 1.2e-52 211.5 309 39.8
Ah.06g182740 Amaranthus hybridus HOM05D010117 ORTHO05D012431 9.5e-45 185.3 440 33.0
AUR62020837 Chenopodium quinoa HOM05D010117 ORTHO05D012431 5.6e-37 159.5 274 36.1
AUR62030073 Chenopodium quinoa HOM05D010117 ORTHO05D012431 1.1e-35 155.2 501 26.9
Ah.06g182730 Amaranthus hybridus HOM05D010117 ORTHO05D012431 2.3e-35 154.1 380 32.1
AUR62018582 Chenopodium quinoa HOM05D010117 ORTHO05D012431 6.8e-35 152.5 447 26.6
AUR62039086 Chenopodium quinoa HOM05D010117 ORTHO05D012431 8.9e-27 125.6 462 26.0
AUR62038226 Chenopodium quinoa HOM05D010117 ORTHO05D012431 9.6e-21 105.5 202 33.2
AUR62030075 Chenopodium quinoa HOM05D010117 ORTHO05D012431 3.4e-18 97.1 112 45.5
SGA_v2.0_scaffold60G20988 Striga asiatica HOM05D000151 ORTHO05D000074 3.3e-13 80.5 238 26.9
AUR62010299 Chenopodium quinoa HOM05D000151 ORTHO05D000074 6.2e-12 76.3 239 26.4
Peaxi162Scf00300g00316 Petunia axillaris HOM05D000151 ORTHO05D000074 1.4e-11 75.1 387 24.0
Solyc11g005160.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 2.4e-11 74.3 266 25.2
Sopen01g053970 Solanum pennellii HOM05D000151 ORTHO05D000074 3.1e-11 73.9 102 33.3
SHI05785 Sapria himalayana HOM05D000151 ORTHO05D000074 4.0e-11 73.6 219 30.6
Solyc01g111920.3 Solanum lycopersicum HOM05D000151 ORTHO05D000074 4.0e-11 73.6 102 33.3
Haze_21630 Corylus avellana HOM05D000151 ORTHO05D000074 5.3e-11 73.2 177 28.8
Haze_21631 Corylus avellana HOM05D000151 ORTHO05D000074 6.9e-11 72.8 319 24.8
Eucgr.I01468 Eucalyptus grandis HOM05D000151 ORTHO05D000074 9.0e-11 72.4 214 23.8
Nitab4.5_0003603g0140 Nicotiana tabacum HOM05D000151 ORTHO05D000074 9.0e-11 72.4 215 25.6
Haze_03686 Corylus avellana HOM05D000151 ORTHO05D000074 1.2e-10 72.0 345 24.9
Nitab4.5_0003679g0070 Nicotiana tabacum HOM05D000151 ORTHO05D000074 2.6e-10 70.9 215 25.1
Cfa007041 Carpinus fangiana HOM05D002155 ORTHO05D002215 9.9e-10 68.9 345 25.2
Sabra04G0121100 Salix brachista HOM05D000151 ORTHO05D000074 2.2e-09 67.8 234 26.5
PGSC0003DMG400018632 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.2e-09 67.8 105 32.4
Cfa007044 Carpinus fangiana HOM05D000151 ORTHO05D000074 2.9e-09 67.4 415 24.8
Rhsim02G0106100 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.9e-09 67.4 160 34.4
EL10Ac9g22285 Beta vulgaris HOM05D000151 ORTHO05D000074 3.8e-09 67.0 233 27.0
PGSC0003DMG400006040 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.9e-09 66.6 234 25.2
EL10Ac2g02955 Beta vulgaris HOM05D000151 ORTHO05D000074 6.4e-09 66.2 162 29.0
Phvul.003G267700 Phaseolus vulgaris HOM05D000151 ORTHO05D000074 8.4e-09 65.9 153 29.4
Potri.004G179685 Populus trichocarpa HOM05D000151 ORTHO05D000074 8.4e-09 65.9 214 25.2
QL06p052388 Quercus lobata HOM05D000151 ORTHO05D000074 8.4e-09 65.9 305 24.3
CANSAT25G1224 Cannabis sativa HOM05D000151 ORTHO05D000074 1.4e-08 65.1 211 24.2
Cfa007042 Carpinus fangiana HOM05D000151 ORTHO05D000074 1.4e-08 65.1 167 27.5
Duzib052G1153 Durio zibethinus HOM05D000151 ORTHO05D000074 1.4e-08 65.1 213 25.8
QL06p052352 Quercus lobata HOM05D000151 ORTHO05D000074 1.9e-08 64.7 335 24.8
Manes.01G152400 Manihot esculenta HOM05D000151 ORTHO05D000074 2.4e-08 64.3 256 27.7
Peaxi162Scf00119g01111 Petunia axillaris HOM05D000151 ORTHO05D000074 4.2e-08 63.5 112 31.2
Haze_03688 Corylus avellana HOM05D002155 ORTHO05D002215 5.4e-08 63.2 174 25.9
Peaxi162Scf00300g00043 Petunia axillaris HOM05D000151 ORTHO05D000074 5.4e-08 63.2 103 33.0
AUR62008100 Chenopodium quinoa HOM05D000151 ORTHO05D000074 7.1e-08 62.8 148 26.4
AUR62028677 Chenopodium quinoa HOM05D000151 ORTHO05D000074 7.1e-08 62.8 148 26.4
PGSC0003DMG400006059 Solanum tuberosum HOM05D000151 ORTHO05D000074 9.3e-08 62.4 259 26.3
VMungo0251G1278 Vigna mungo HOM05D000151 ORTHO05D000074 1.2e-07 62.0 160 26.9
AL4G18420 Arabidopsis lyrata HOM05D000151 ORTHO05D000074 1.6e-07 61.6 137 29.9
Migut.F00668 Erythranthe guttata HOM05D000151 ORTHO05D000074 1.6e-07 61.6 156 28.2
vmacro02302 Vaccinium macrocarpon HOM05D000151 ORTHO05D000074 1.6e-07 61.6 111 33.3
COL.COLO4_18005 Corchorus olitorius HOM05D000151 ORTHO05D000074 2.1e-07 61.2 151 29.1
FAN28G1149 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.1e-07 61.2 154 27.9
TWI75G0953 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 2.1e-07 61.2 262 22.9
CAN.G1235.35 Capsicum annuum HOM05D000151 ORTHO05D000074 2.7e-07 60.8 109 29.4
ECA246G4358 Erigeron canadensis HOM05D000151 ORTHO05D000074 2.7e-07 60.8 369 25.5
Ah.06g182770 Amaranthus hybridus HOM05D010117 ORTHO05D060300 3.5e-07 60.5 94 39.4
Cc00_g28600 Coffea canephora HOM05D000151 ORTHO05D000074 3.5e-07 60.5 101 33.7
FAN19G1876 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.5e-07 60.5 155 29.0
QL11p052366 Quercus lobata HOM05D000151 ORTHO05D000074 3.5e-07 60.5 106 33.0
Manes.08G042200 Manihot esculenta HOM05D000151 ORTHO05D000074 4.6e-07 60.1 148 30.4
Peaxi162Scf00300g00317 Petunia axillaris HOM05D000151 ORTHO05D000074 4.6e-07 60.1 243 23.9
QL11p053223 Quercus lobata HOM05D000151 ORTHO05D000074 4.6e-07 60.1 106 33.0
Medtr3g030050 Medicago truncatula HOM05D000151 ORTHO05D000074 6.0e-07 59.7 183 26.8
CANSAT25G3017 Cannabis sativa HOM05D000151 ORTHO05D000074 1.0e-06 58.9 192 28.1
Cfa007043 Carpinus fangiana HOM05D000151 ORTHO05D000074 1.0e-06 58.9 109 29.4
FAN28G1965 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.0e-06 58.9 171 26.9
QL06p052381 Quercus lobata HOM05D000151 ORTHO05D000074 1.3e-06 58.5 313 23.0
Aqoxy5G01075 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.8e-06 58.2 308 23.4
Peaxi162Scf00300g00049 Petunia axillaris HOM05D000151 ORTHO05D000074 1.8e-06 58.2 156 28.8
Haze_03687 Corylus avellana HOM05D000151 ORTHO05D000074 2.3e-06 57.8 151 27.8
FAN23G1786 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.3e-06 57.8 99 35.4
Gorai.002G201700 Gossypium raimondii HOM05D000151 ORTHO05D000074 3.0e-06 57.4 287 23.0
AUR62024241 Chenopodium quinoa HOM05D000151 ORTHO05D000074 3.9e-06 57.0 207 22.7
Peaxi162Scf00362g00315 Petunia axillaris HOM05D000151 ORTHO05D000074 3.9e-06 57.0 106 27.4
Duzib147G0484 Durio zibethinus HOM05D000151 ORTHO05D000074 5.1e-06 56.6 115 29.6
Rhsim11G0195100 Rhododendron simsii HOM05D000151 ORTHO05D000074 5.1e-06 56.6 117 30.8
CARHR244070 Cardamine hirsuta HOM05D000151 ORTHO05D000074 6.7e-06 56.2 122 27.0


User provided reference genes

Program Settings