Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.06g181820 Amaranthus hybridus HOM05D008188 ORTHO05D010325 1.0e-87 326.6 156 100.0
EL10Ac4g07667 Beta vulgaris HOM05D008188 ORTHO05D010325 7.4e-46 187.6 153 58.8
AUR62015890 Chenopodium quinoa HOM05D008188 ORTHO05D010325 8.8e-31 137.5 152 47.4
EL10Ac4g07682 Beta vulgaris HOM05D008188 ORTHO05D010325 1.1e-30 137.1 152 47.4
AUR62036266 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.7e-29 132.1 158 44.3
EL10Ac6g15504 Beta vulgaris HOM05D008188 ORTHO05D010325 6.9e-28 127.9 151 45.7
EL10Ac5g12929 Beta vulgaris HOM05D008188 ORTHO05D010325 9.1e-28 127.5 151 45.0
EL10Ac6g15527 Beta vulgaris HOM05D008188 ORTHO05D010325 2.6e-27 125.9 150 46.7
EL10Ac6g15529 Beta vulgaris HOM05D008188 ORTHO05D010325 2.6e-27 125.9 150 46.7
EL10Ac6g15502 Beta vulgaris HOM05D008188 ORTHO05D010325 4.5e-27 125.2 151 45.0
EL10Ac6g15503 Beta vulgaris HOM05D008188 ORTHO05D010325 4.5e-27 125.2 151 45.0
AUR62039716 Chenopodium quinoa HOM05D008188 ORTHO05D010325 4.5e-27 125.2 156 44.2
AUR62044614 Chenopodium quinoa HOM05D008188 ORTHO05D010325 4.5e-27 125.2 156 44.2
EL10Ac2g03007 Beta vulgaris HOM05D008188 ORTHO05D010325 3.8e-26 122.1 151 43.7
EL10Ac2g03009 Beta vulgaris HOM05D008188 ORTHO05D010325 3.8e-26 122.1 151 43.7
EL10Ac2g03011 Beta vulgaris HOM05D008188 ORTHO05D010325 6.5e-26 121.3 151 43.7
EL10Ac8g19709 Beta vulgaris HOM05D008188 ORTHO05D010325 1.4e-25 120.2 142 46.5
AUR62026058 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.1e-24 116.3 155 40.6
AUR62015896 Chenopodium quinoa HOM05D008188 ORTHO05D010325 6.1e-24 114.8 148 42.6
AUR62015897 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.4e-23 113.6 155 40.6
AUR62024467 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.0e-23 112.5 156 41.7
AUR62020326 Chenopodium quinoa HOM05D008188 ORTHO05D010325 5.1e-23 111.7 146 43.2
EL10Ac4g07670 Beta vulgaris HOM05D001974 ORTHO05D001995 1.1e-22 110.5 150 44.0
EL10Ac4g07719 Beta vulgaris HOM05D008188 ORTHO05D010325 1.3e-21 107.1 150 40.0
EL10Ac6g15528 Beta vulgaris HOM05D008188 ORTHO05D010325 1.8e-20 103.2 111 48.6
EL10As8g23832 Beta vulgaris HOM05D008188 ORTHO05D010325 7.0e-20 101.3 159 37.7
EL10Ac6g15505 Beta vulgaris HOM05D008188 ORTHO05D010325 4.5e-19 98.6 156 35.9
AUR62041158 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.7e-18 96.7 133 42.1
EL10As2g23257 Beta vulgaris HOM05D008188 ORTHO05D010325 2.9e-18 95.9 153 38.6
EL10As2g23259 Beta vulgaris HOM05D008188 ORTHO05D010325 2.9e-18 95.9 153 38.6
AUR62015695 Chenopodium quinoa HOM05D008188 ORTHO05D010325 5.0e-18 95.1 139 39.6
EL10Ac6g15506 Beta vulgaris HOM05D008188 ORTHO05D010325 6.5e-18 94.7 159 35.8
EL10Ac6g15507 Beta vulgaris HOM05D008188 ORTHO05D010325 6.5e-18 94.7 159 35.8
EL10Ac6g15513 Beta vulgaris HOM05D008188 ORTHO05D010325 1.1e-17 94.0 158 36.1
EL10Ac4g07680 Beta vulgaris HOM05D008188 ORTHO05D010325 1.4e-17 93.6 152 37.5
EL10Ac4g07681 Beta vulgaris HOM05D008188 ORTHO05D010325 1.4e-17 93.6 153 37.3
EL10Ac4g07713 Beta vulgaris HOM05D008188 ORTHO05D010325 1.4e-17 93.6 152 35.5
EL10Ac6g15510 Beta vulgaris HOM05D008188 ORTHO05D010325 1.4e-17 93.6 158 36.1
EL10Ac6g15508 Beta vulgaris HOM05D008188 ORTHO05D010325 3.2e-17 92.4 156 35.9
EL10Ac6g15512 Beta vulgaris HOM05D008188 ORTHO05D010325 3.2e-17 92.4 156 35.9
AUR62020330 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.2e-16 90.5 133 39.8
EL10Ac6g15514 Beta vulgaris HOM05D008188 ORTHO05D010325 1.6e-16 90.1 156 35.3
AUR62020328 Chenopodium quinoa HOM05D008188 ORTHO05D010325 8.0e-16 87.8 132 40.2
AUR62020332 Chenopodium quinoa HOM05D008188 ORTHO05D010325 8.0e-16 87.8 132 40.2
AUR62044316 Chenopodium quinoa HOM05D008188 ORTHO05D010325 8.0e-16 87.8 132 40.2
AUR62015892 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.4e-15 87.0 156 35.9
AUR62034788 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.3e-15 86.3 153 34.0
AUR62038400 Chenopodium quinoa HOM05D008188 ORTHO05D010325 5.2e-15 85.1 147 33.3
AUR62010294 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.6e-14 82.8 140 39.3
AUR62010295 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.7e-13 79.0 143 35.0
AUR62015893 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.7e-13 79.0 151 31.8
AUR62029286 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.4e-12 77.0 99 44.4
AUR62015894 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.8e-12 76.6 139 36.0
EL10Ac8g20539 Beta vulgaris HOM05D008188 ORTHO05D010325 2.6e-11 72.8 152 32.2
EL10Ac4g07669 Beta vulgaris HOM05D001974 ORTHO05D001995 2.9e-10 69.3 150 33.3
Lsat_1_v5_gn_7_30001 Lactuca sativa HOM05D000862 ORTHO05D000943 2.9e-10 69.3 125 30.4
Ah.12g061570 Amaranthus hybridus HOM05D008188 ORTHO05D010325 5.0e-10 68.6 125 36.8
Lju1609A2T33 Lonicera japonica HOM05D000862 ORTHO05D000943 7.2e-09 64.7 78 47.4
Lsat_1_v5_gn_7_29740 Lactuca sativa HOM05D000862 ORTHO05D000943 9.4e-09 64.3 126 31.7
Atru.chr1.323 Acer truncatum HOM05D000862 ORTHO05D000943 1.2e-08 63.9 147 32.0
Dinv39638 Davidia involucrata HOM05D001418 ORTHO05D002038 2.1e-08 63.2 78 46.2
Lju114A8G16 Lonicera japonica HOM05D000862 ORTHO05D000943 2.7e-08 62.8 130 36.9
Nn8g39949 Nelumbo nucifera HOM05D000862 ORTHO05D000943 2.7e-08 62.8 145 31.0
Solyc09g090445.1 Solanum lycopersicum HOM05D000862 ORTHO05D000943 3.6e-08 62.4 125 33.6
Ah.04g166220 Amaranthus hybridus HOM05D008188 ORTHO05D010325 4.7e-08 62.0 85 40.0
Lsat_1_v5_gn_0_36281 Lactuca sativa HOM05D000862 ORTHO05D000943 4.7e-08 62.0 123 35.0
Lj4C500T2 Lonicera japonica HOM05D000862 ORTHO05D000943 4.7e-08 62.0 124 38.7
Sopen09g033370 Solanum pennellii HOM05D000862 ORTHO05D000943 4.7e-08 62.0 125 33.6
CDE05G1578 Ceratophyllum demersum HOM05D000862 ORTHO05D000943 6.1e-08 61.6 117 39.3
Dinv39635 Davidia involucrata HOM05D000862 ORTHO05D000943 6.1e-08 61.6 126 34.1
Lju427C3T2 Lonicera japonica HOM05D000862 ORTHO05D000943 6.1e-08 61.6 130 35.4
PSO541G2558 Papaver somniferum HOM05D000862 ORTHO05D000943 6.1e-08 61.6 130 35.4
PSO675G6624 Papaver somniferum HOM05D000862 ORTHO05D000943 6.1e-08 61.6 130 35.4
Sabra17G0025900 Salix brachista HOM05D000862 ORTHO05D000943 6.1e-08 61.6 88 43.2
Hma1.2p1_0614F.1_g189620 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 1.0e-07 60.8 128 37.5
Lsat_1_v5_gn_9_118500 Lactuca sativa HOM05D000862 ORTHO05D000943 1.0e-07 60.8 125 33.6
Lsat_1_v5_gn_9_118540 Lactuca sativa HOM05D000862 ORTHO05D000943 1.0e-07 60.8 125 33.6
Lj4A511T16 Lonicera japonica HOM05D000862 ORTHO05D000943 1.0e-07 60.8 132 36.4
PGSC0003DMG404017205 Solanum tuberosum HOM05D000862 ORTHO05D000943 1.0e-07 60.8 125 32.0
Phvul.006G068800 Phaseolus vulgaris HOM05D000862 ORTHO05D000943 1.4e-07 60.5 75 45.3
QL07p019673 Quercus lobata HOM05D000862 ORTHO05D000943 1.4e-07 60.5 127 36.2
Lsat_1_v5_gn_0_34700 Lactuca sativa HOM05D000862 ORTHO05D000943 1.8e-07 60.1 120 35.0
Potri.017G010900 Populus trichocarpa HOM05D000862 ORTHO05D000943 1.8e-07 60.1 144 34.0
QL02p008677 Quercus lobata HOM05D000862 ORTHO05D000943 1.8e-07 60.1 129 37.2
Sed0007237 Sechium edule HOM05D000862 ORTHO05D000003 1.8e-07 60.1 77 42.9
Ah.12g057670 Amaranthus hybridus HOM05D008188 ORTHO05D010325 4.0e-07 58.9 83 43.4
HanXRQChr02g0047121 Helianthus annuus HOM05D000862 ORTHO05D010325 4.0e-07 58.9 140 30.0
QL02p010285 Quercus lobata HOM05D000862 ORTHO05D000943 5.2e-07 58.5 78 38.5
Atru.chr11.2300 Acer truncatum HOM05D000862 ORTHO05D000943 6.7e-07 58.2 132 32.6
ATR0665G023 Amborella trichopoda HOM05D000862 ORTHO05D000943 8.8e-07 57.8 127 33.9
Aqoxy1G03033 Aquilegia oxysepala HOM05D000862 ORTHO05D000943 8.8e-07 57.8 102 40.2
MELO3C010973.2 Cucumis melo HOM05D000862 ORTHO05D000943 8.8e-07 57.8 75 42.7
ECA238G2827 Erigeron canadensis HOM05D000041 ORTHO05D000452 8.8e-07 57.8 141 30.5
Hma1.2p1_0040F.1_g025100 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 8.8e-07 57.8 128 35.2
Lsat_1_v5_gn_1_17781 Lactuca sativa HOM05D000862 ORTHO05D000943 8.8e-07 57.8 75 42.7
VMungo0540G1698 Vigna mungo HOM05D000862 ORTHO05D000943 8.8e-07 57.8 130 33.8
Cpa.g.c31450.2 Carica papaya HOM05D000862 ORTHO05D000943 1.2e-06 57.4 81 38.3
HanXRQChr02g0042121 Helianthus annuus HOM05D000862 ORTHO05D000943 1.2e-06 57.4 127 31.5
Sed0026682 Sechium edule HOM05D000862 ORTHO05D000943 1.2e-06 57.4 77 42.9
CsaV3_2G029090 Cucumis sativus L. HOM05D000862 ORTHO05D000943 1.5e-06 57.0 77 41.6
Glyma.18G061800 Glycine max HOM05D000862 ORTHO05D000943 1.5e-06 57.0 97 40.2
ClCG08G014690 Citrullus lanatus HOM05D000862 ORTHO05D000003 2.0e-06 56.6 75 41.3
Psat5g157920 Pisum sativum HOM05D000862 ORTHO05D000943 2.0e-06 56.6 94 40.4
Atru.chr1.3817 Acer truncatum HOM05D000862 ORTHO05D000943 2.6e-06 56.2 145 31.7
Actinidia22511 Actinidia chinensis HOM05D000862 ORTHO05D000943 2.6e-06 56.2 75 42.7
Medtr3g464370 Medicago truncatula HOM05D000862 ORTHO05D000943 2.6e-06 56.2 130 33.8
Hund26884 Selenicereus undatus HOM05D000862 ORTHO05D000943 2.6e-06 56.2 144 28.5
Dinv39464 Davidia involucrata HOM05D000862 ORTHO05D000943 3.3e-06 55.8 75 40.0
Lj6g0003682 Lotus japonicus HOM05D000862 ORTHO05D000943 3.3e-06 55.8 94 38.3
Manes.05G154000 Manihot esculenta HOM05D000862 ORTHO05D000943 3.3e-06 55.8 75 41.3
Glyma.11G173800 Glycine max HOM05D000862 ORTHO05D000943 4.4e-06 55.5 97 39.2
Sc15g0007200 Simmondsia chinensis HOM05D000862 ORTHO05D000943 4.4e-06 55.5 75 38.7
CANSAT54G1423 Cannabis sativa HOM05D000862 ORTHO05D000943 5.7e-06 55.1 80 40.0
ECA232G1312 Erigeron canadensis HOM05D000041 ORTHO05D000452 5.7e-06 55.1 137 30.7
HanXRQChr02g0042151 Helianthus annuus HOM05D000862 ORTHO05D000943 5.7e-06 55.1 147 29.9
HanXRQChr14g0439381 Helianthus annuus HOM05D000041 ORTHO05D000452 5.7e-06 55.1 142 28.9
Lj4A33T79 Lonicera japonica HOM05D000862 ORTHO05D000943 5.7e-06 55.1 78 39.7
Nn5g29732 Nelumbo nucifera HOM05D000862 ORTHO05D000943 5.7e-06 55.1 132 29.5
SGA_v2.0_scaffold326G48727 Striga asiatica HOM05D000862 ORTHO05D000943 5.7e-06 55.1 126 31.7
TAR633G0151 Trochodendron aralioides HOM05D000862 ORTHO05D000943 5.7e-06 55.1 130 30.8
AUR62010292 Chenopodium quinoa HOM05D008188 ORTHO05D010325 7.5e-06 54.7 113 32.7
TAR365G1237 Trochodendron aralioides HOM05D000101 ORTHO05D000089 7.5e-06 54.7 132 31.8
CAN.G220.49 Capsicum annuum HOM05D000862 ORTHO05D000943 9.7e-06 54.3 144 27.8
Nn5g29733 Nelumbo nucifera HOM05D000862 ORTHO05D000943 9.7e-06 54.3 76 38.2
Nitab4.5_0005317g0020 Nicotiana tabacum HOM05D000862 ORTHO05D000943 9.7e-06 54.3 132 31.8
Sc12g0009970 Simmondsia chinensis HOM05D000862 ORTHO05D000943 9.7e-06 54.3 131 30.5


User provided reference genes

Program Settings