Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.04g157220 Amaranthus hybridus HOM05D022812 ORTHO05D021202 3.3e-71 271.6 133 100.0
Ah.05g174690 Amaranthus hybridus HOM05D027578 ORTHO05D021202 3.9e-11 72.0 127 35.4
Ah.11g041650 Amaranthus hybridus HOM05D000353 ORTHO05D000174 3.3e-10 68.9 111 38.7
TPR.G27579 Trifolium pratense HOM05D007499 ORTHO05D009491 3.4e-07 58.9 129 31.0
Thhalv10027364m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.7e-06 56.6 152 24.3
Medtr3g056270 Medicago truncatula HOM05D000353 ORTHO05D000174 1.7e-06 56.6 130 27.7
Lsat_1_v5_gn_8_53420 Lactuca sativa HOM05D000147 ORTHO05D001254 2.2e-06 56.2 146 32.2
Medtr4g036240 Medicago truncatula HOM05D000353 ORTHO05D000174 2.2e-06 56.2 130 27.7
arahy.Tifrunner.gnm1.ann1.YGT1U1 Arachis hypogaea HOM05D022812 ORTHO05D021202 2.9e-06 55.8 114 31.6
arahy.Tifrunner.gnm1.ann1.3QWG3L Arachis hypogaea HOM05D000353 ORTHO05D000174 4.9e-06 55.1 135 28.9
Thhalv10028256m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 4.9e-06 55.1 152 23.0
arahy.Tifrunner.gnm1.ann1.BHF996 Arachis hypogaea HOM05D000353 ORTHO05D000174 6.4e-06 54.7 105 30.5
Ah.05g172580 Amaranthus hybridus HOM05D032352 ORTHO05D026468 8.3e-06 54.3 40 67.5
Ah.13g067090 Amaranthus hybridus HOM05D032352 ORTHO05D026468 8.3e-06 54.3 40 67.5


User provided reference genes

Program Settings