Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.04g156280 Amaranthus hybridus HOM05D000017 ORTHO05D000013 6.7e-75 283.9 139 100.0
EL10Ac7g17566 Beta vulgaris HOM05D000017 ORTHO05D000013 4.7e-20 101.7 140 38.6
EL10Ac4g08650 Beta vulgaris HOM05D000017 ORTHO05D000013 3.4e-18 95.5 136 37.5
EL10Ac5g12206 Beta vulgaris HOM05D011815 ORTHO05D012433 1.7e-17 93.2 121 38.8
EL10Ac2g04102 Beta vulgaris HOM05D000017 ORTHO05D000013 8.4e-17 90.9 121 37.2
Actinidia29263 Actinidia chinensis HOM05D000017 ORTHO05D000013 9.3e-16 87.4 139 35.3
EL10Ac9g20745 Beta vulgaris HOM05D000017 ORTHO05D000013 2.1e-15 86.3 107 37.4
EL10Ac7g17911 Beta vulgaris HOM05D016879 ORTHO05D000013 1.7e-14 83.2 116 35.3
Hma1.2p1_3404F.1_g335820 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.7e-14 83.2 139 36.0
Dinv06190 Davidia involucrata HOM05D000017 ORTHO05D000013 3.9e-14 82.0 139 32.4
Hma1.2p1_1264F.1_g271275 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.5e-13 80.1 138 34.1
Rhsim02G0213500 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.6e-13 78.2 138 31.9
EL10Ac3g06523 Beta vulgaris HOM05D000017 ORTHO05D000013 9.6e-13 77.4 106 36.8
EL10Ac3g06425 Beta vulgaris HOM05D000017 ORTHO05D000013 2.8e-12 75.9 136 33.8
Rhsim01G0131900 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.8e-12 75.9 138 34.1
Rhsim06G0119600 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.8e-12 75.9 138 31.9
Rhsim07G0202700 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.6e-12 75.5 138 34.1
Hma1.2p1_0973F.1_g242990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.8e-12 75.1 115 34.8
Aqoxy5G02808 Aquilegia oxysepala HOM05D000017 ORTHO05D000013 1.8e-11 73.2 134 31.3
Rhsim05G0122300 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.1e-11 72.4 135 32.6
CDE02G3799 Ceratophyllum demersum HOM05D000017 ORTHO05D000013 4.0e-11 72.0 136 31.6
PSO170G0699 Papaver somniferum HOM05D000017 ORTHO05D000013 4.0e-11 72.0 134 30.6
Rhsim08G0160500 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.3e-11 71.6 138 30.4
COL.COLO4_19545 Corchorus olitorius HOM05D010554 ORTHO05D012512 1.2e-10 70.5 116 29.3
Hma1.2p1_1233F.1_g268990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.2e-10 70.5 115 32.2
Ah.12g060920 Amaranthus hybridus HOM05D000017 ORTHO05D000013 1.5e-10 70.1 41 80.5
Psat4g021080 Pisum sativum HOM05D000017 ORTHO05D000013 1.5e-10 70.1 135 31.9
Lj4g0022087 Lotus japonicus HOM05D000017 ORTHO05D000013 2.0e-10 69.7 135 31.9
TPR.G12573 Trifolium pratense HOM05D000017 ORTHO05D000013 2.0e-10 69.7 135 31.9
EL10Ac4g09552 Beta vulgaris HOM05D000017 ORTHO05D000013 4.4e-10 68.6 135 31.9
EL10Ac8g19186 Beta vulgaris HOM05D000017 ORTHO05D000013 4.4e-10 68.6 123 30.9
Lj4C930T4 Lonicera japonica HOM05D000017 ORTHO05D000013 4.4e-10 68.6 139 28.8
Atru.chr13.2473 Acer truncatum HOM05D000017 ORTHO05D000013 7.6e-10 67.8 134 32.1
PGR004G1143 Punica granatum HOM05D000017 ORTHO05D000013 9.9e-10 67.4 135 30.4
ATR0582G296 Amborella trichopoda HOM05D000017 ORTHO05D000013 1.3e-09 67.0 138 31.9
Eucgr.H04127 Eucalyptus grandis HOM05D000017 ORTHO05D000013 1.3e-09 67.0 135 31.1
Hma1.2p1_0561F.1_g178910 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.3e-09 67.0 138 31.9
PSO339G5691 Papaver somniferum HOM05D000017 ORTHO05D000013 1.3e-09 67.0 138 31.9
Rhsim01G0057800 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.3e-09 67.0 135 29.6
Ah.10g026870 Amaranthus hybridus HOM05D000017 ORTHO05D000013 1.7e-09 66.6 134 30.6
Rhsim01G0059300 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.7e-09 66.6 135 29.6
Actinidia11687 Actinidia chinensis HOM05D000017 ORTHO05D000013 2.2e-09 66.2 135 32.6
EL10Ac7g17737 Beta vulgaris HOM05D000017 ORTHO05D000013 2.2e-09 66.2 93 36.6
MD16G1135600 Malus domestica HOM05D000017 ORTHO05D000013 2.2e-09 66.2 136 27.9
Nn4g25370 Nelumbo nucifera HOM05D000017 ORTHO05D000013 2.2e-09 66.2 135 30.4
MD13G1140100 Malus domestica HOM05D000017 ORTHO05D000013 2.9e-09 65.9 136 27.9
Atru.chr10.1873 Acer truncatum HOM05D000017 ORTHO05D000013 3.8e-09 65.5 118 30.5
Hma1.2p1_0068F.1_g037160 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.8e-09 65.5 115 30.4
RhsimUnG0149100 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.8e-09 65.5 107 32.7
Ca_21375_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 4.9e-09 65.1 135 29.6
Atru.chr1.282 Acer truncatum HOM05D000017 ORTHO05D000013 6.4e-09 64.7 138 29.7
Lj9C399T2 Lonicera japonica HOM05D000017 ORTHO05D000013 6.4e-09 64.7 136 26.5
Sed0021382 Sechium edule HOM05D000017 ORTHO05D000013 6.4e-09 64.7 135 30.4
Migut.D02070 Erythranthe guttata HOM05D000017 ORTHO05D000013 8.4e-09 64.3 133 29.3
FvH4_6g08441 Fragaria vesca HOM05D000017 ORTHO05D000013 8.4e-09 64.3 135 31.1
Hma1.2p1_1051F.1_g252080 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.4e-09 64.3 118 29.7
EL10Ac4g08638 Beta vulgaris HOM05D016879 ORTHO05D000013 1.1e-08 63.9 84 36.9
Os10g0104700 Oryza sativa ssp. japonica HOM05D000017 ORTHO05D000013 1.1e-08 63.9 134 28.4
Atru.chr1.2149 Acer truncatum HOM05D000017 ORTHO05D000013 1.4e-08 63.5 136 28.7
Actinidia14514 Actinidia chinensis HOM05D000017 ORTHO05D000013 1.4e-08 63.5 137 30.7
PSO675G2927 Papaver somniferum HOM05D000017 ORTHO05D000013 1.4e-08 63.5 138 31.9
RcHm_v2.0_Chr3g0458421 Rosa chinensis HOM05D000017 ORTHO05D000013 1.4e-08 63.5 135 30.4
Sed0005941 Sechium edule HOM05D000017 ORTHO05D000013 1.4e-08 63.5 118 25.4
HPP92_007680 Vanilla planifolia HOM05D000017 ORTHO05D000013 1.4e-08 63.5 138 26.8
PSO478G2303 Papaver somniferum HOM05D000017 ORTHO05D000013 1.9e-08 63.2 138 31.2
Hma1.2p1_1102F.1_g257230 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.4e-08 62.8 115 29.6
PGR031G3483 Punica granatum HOM05D000017 ORTHO05D000013 2.4e-08 62.8 140 27.1
PGR067G0005 Punica granatum HOM05D000017 ORTHO05D000013 2.4e-08 62.8 140 27.1
CANSAT56G2374 Cannabis sativa HOM05D000017 ORTHO05D000013 3.2e-08 62.4 134 23.1
CANSAT80G0115 Cannabis sativa HOM05D000017 ORTHO05D000013 3.2e-08 62.4 134 23.1
Lj3C156T17 Lonicera japonica HOM05D000017 ORTHO05D000013 3.2e-08 62.4 136 25.7
ECA248G3125 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.2e-08 62.0 115 27.0
Hma1.2p1_0182F.1_g080140 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.2e-08 62.0 134 26.9
PSO063G2026 Papaver somniferum HOM05D000017 ORTHO05D000013 4.2e-08 62.0 140 30.7
QL04p037370 Quercus lobata HOM05D000017 ORTHO05D000013 4.2e-08 62.0 139 28.8
QL11p032217 Quercus lobata HOM05D000017 ORTHO05D000013 4.2e-08 62.0 139 28.8
EL10Ac7g17429 Beta vulgaris HOM05D000017 ORTHO05D000013 5.4e-08 61.6 112 33.9
PSO017G0458 Papaver somniferum HOM05D000017 ORTHO05D000013 7.1e-08 61.2 134 26.1
PSO541G4977 Papaver somniferum HOM05D000017 ORTHO05D000013 7.1e-08 61.2 140 30.7
CANSAT64G2354 Cannabis sativa HOM05D000017 ORTHO05D000013 9.3e-08 60.8 115 28.7
Hma1.2p1_2038F.1_g312050 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.3e-08 60.8 114 26.3
PSO063G2896 Papaver somniferum HOM05D000017 ORTHO05D000013 1.2e-07 60.5 140 30.7
PSO724G0284 Papaver somniferum HOM05D000017 ORTHO05D000013 1.2e-07 60.5 137 27.0
vmacro23380 Vaccinium macrocarpon HOM05D007604 ORTHO05D008966 1.2e-07 60.5 104 30.8
Actinidia23256 Actinidia chinensis HOM05D000017 ORTHO05D000013 1.6e-07 60.1 119 29.4
EL10Ac7g17727 Beta vulgaris HOM05D016879 ORTHO05D000013 1.6e-07 60.1 85 31.8
CANSAT01G2708 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-07 60.1 142 35.2
Duzib187G1213 Durio zibethinus HOM05D000017 ORTHO05D000013 1.6e-07 60.1 133 26.3
Nitab4.5_0001672g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000013 1.6e-07 60.1 135 30.4
PSO782G4063 Papaver somniferum HOM05D000017 ORTHO05D000013 1.6e-07 60.1 146 26.7
Sopen12g002860 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-07 60.1 137 29.9
HPP92_003635 Vanilla planifolia HOM05D000017 ORTHO05D000013 1.6e-07 60.1 136 27.2
Atru.chr1.2453 Acer truncatum HOM05D000017 ORTHO05D000013 2.1e-07 59.7 113 31.9
EL10Ac6g14784 Beta vulgaris HOM05D000017 ORTHO05D000013 2.1e-07 59.7 70 40.0
ECA233G6249 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.1e-07 59.7 117 26.5
Hma1.2p1_0133F.1_g061350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.1e-07 59.7 114 29.8
Hma1.2p1_0400F.1_g144590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.1e-07 59.7 114 29.8
PSO384G1462 Papaver somniferum HOM05D000017 ORTHO05D000013 2.1e-07 59.7 140 30.7
Atru.chr8.44 Acer truncatum HOM05D000017 ORTHO05D000013 2.7e-07 59.3 134 29.1
Ah.14g079350 Amaranthus hybridus HOM05D030122 ORTHO05D000013 2.7e-07 59.3 96 30.2
CANSAT01G2010 Cannabis sativa HOM05D000017 ORTHO05D000013 2.7e-07 59.3 115 29.6
PSO017G3272 Papaver somniferum HOM05D000017 ORTHO05D000013 2.7e-07 59.3 114 28.9
PSO063G2274 Papaver somniferum HOM05D000017 ORTHO05D000013 2.7e-07 59.3 137 26.3
PSO478G1082 Papaver somniferum HOM05D000017 ORTHO05D000013 2.7e-07 59.3 140 30.7
PSO782G5161 Papaver somniferum HOM05D000017 ORTHO05D000013 2.7e-07 59.3 138 30.4
CANSAT80G0855 Cannabis sativa HOM05D000017 ORTHO05D000013 3.5e-07 58.9 118 27.1
PSO675G7071 Papaver somniferum HOM05D000017 ORTHO05D000013 3.5e-07 58.9 117 27.4
RcHm_v2.0_Chr5g0042901 Rosa chinensis HOM05D000017 ORTHO05D000013 3.5e-07 58.9 135 25.9
EL10Ac6g14537 Beta vulgaris HOM05D016879 ORTHO05D000013 4.6e-07 58.5 59 47.5
CANSAT21G0768 Cannabis sativa HOM05D000017 ORTHO05D000013 4.6e-07 58.5 115 27.8
Ciclev10028630m.g Citrus clementina HOM05D000017 ORTHO05D000013 4.6e-07 58.5 114 31.6
Hma1.2p1_0301F.1_g118240 Hydrangea macrophylla HOM05D000017 ORTHO05D008966 6.0e-07 58.2 80 38.8
PSO210G0861 Papaver somniferum HOM05D000017 ORTHO05D000013 6.0e-07 58.2 137 26.3
PSO357G0547 Papaver somniferum HOM05D000017 ORTHO05D000013 6.0e-07 58.2 137 26.3
PSO601G0010 Papaver somniferum HOM05D000017 ORTHO05D000013 6.0e-07 58.2 137 26.3
PSO675G3327 Papaver somniferum HOM05D000017 ORTHO05D000013 6.0e-07 58.2 137 26.3
Rhsim02G0019500 Rhododendron simsii HOM05D000017 ORTHO05D000013 6.0e-07 58.2 137 28.5
Dinv22459 Davidia involucrata HOM05D000017 ORTHO05D000013 7.9e-07 57.8 142 32.4
PSO013G0147 Papaver somniferum HOM05D000017 ORTHO05D000013 1.0e-06 57.4 137 26.3
PSO384G1896 Papaver somniferum HOM05D000017 ORTHO05D000013 1.0e-06 57.4 137 26.3
PSO675G6071 Papaver somniferum HOM05D000017 ORTHO05D000013 1.0e-06 57.4 137 26.3
Rhsim01G0020300 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.0e-06 57.4 115 25.2
Solyc12g006900.1 Solanum lycopersicum HOM05D000017 ORTHO05D000013 1.0e-06 57.4 136 29.4
Sabra18G0104600 Salix brachista HOM05D000017 ORTHO05D000013 1.3e-06 57.0 133 26.3
TWI59G0426 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.3e-06 57.0 138 32.6
Duzib128G0336 Durio zibethinus HOM05D000017 ORTHO05D000013 1.7e-06 56.6 141 31.2
Lj2C1156G11 Lonicera japonica HOM05D000017 ORTHO05D000013 1.7e-06 56.6 142 33.1
PSO384G1481 Papaver somniferum HOM05D000017 ORTHO05D000013 1.7e-06 56.6 142 28.2
Atru.chr9.5 Acer truncatum HOM05D000017 ORTHO05D000013 2.3e-06 56.2 115 24.3
EL10Ac4g07944 Beta vulgaris HOM05D019179 ORTHO05D000013 2.3e-06 56.2 70 41.4
Nn3g20113 Nelumbo nucifera HOM05D000017 ORTHO05D000013 2.3e-06 56.2 116 29.3
Sed0016066 Sechium edule HOM05D000017 ORTHO05D000013 2.3e-06 56.2 142 32.4
Duzib138G0626 Durio zibethinus HOM05D000017 ORTHO05D000013 3.0e-06 55.8 141 32.6
ECA238G2914 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.0e-06 55.8 115 27.0
Lj5g0009746 Lotus japonicus HOM05D000017 ORTHO05D000013 3.0e-06 55.8 142 32.4
Sed0012244 Sechium edule HOM05D000017 ORTHO05D000013 3.0e-06 55.8 142 32.4
CANSAT56G2336 Cannabis sativa HOM05D000017 ORTHO05D000013 3.9e-06 55.5 118 25.4
CsaV3_UNG233250 Cucumis sativus L. HOM05D000017 ORTHO05D000013 3.9e-06 55.5 144 32.6
Dinv20264 Davidia involucrata HOM05D000017 ORTHO05D000013 3.9e-06 55.5 142 33.1
MD04G1227400 Malus domestica HOM05D000017 ORTHO05D000013 3.9e-06 55.5 141 31.9
Prupe.6G346500 Prunus persica HOM05D000017 ORTHO05D000013 3.9e-06 55.5 141 31.9
Sp3g03450 Schrenkiella parvula HOM05D000017 ORTHO05D000013 3.9e-06 55.5 142 31.7
Solyc01g097030.3 Solanum lycopersicum HOM05D000017 ORTHO05D000013 3.9e-06 55.5 142 31.7
Sopen01g040720 Solanum pennellii HOM05D000017 ORTHO05D000013 3.9e-06 55.5 143 32.2
VMungo0540G2177 Vigna mungo HOM05D000017 ORTHO05D000013 3.9e-06 55.5 142 33.1
Cpa.g.c37041 Carica papaya HOM05D000017 ORTHO05D000013 5.1e-06 55.1 139 26.6
Duzib177G0259 Durio zibethinus HOM05D000017 ORTHO05D000013 5.1e-06 55.1 142 32.4
ECA236G0614 Erigeron canadensis HOM05D000149 ORTHO05D000076 5.1e-06 55.1 100 25.0
FvH4_2g22241 Fragaria vesca HOM05D000017 ORTHO05D000013 5.1e-06 55.1 139 32.4
MD12G1244100 Malus domestica HOM05D000017 ORTHO05D000013 5.1e-06 55.1 141 31.2
PSO210G3696 Papaver somniferum HOM05D000017 ORTHO05D000013 5.1e-06 55.1 140 30.0
PSO384G3737 Papaver somniferum HOM05D000017 ORTHO05D000013 5.1e-06 55.1 142 28.9
THA.LOC104799254 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 5.1e-06 55.1 142 32.4
THA.LOC104802950 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 5.1e-06 55.1 120 30.8
TAR626G1751 Trochodendron aralioides HOM05D000017 ORTHO05D000013 5.1e-06 55.1 133 25.6
AL3G14630 Arabidopsis lyrata HOM05D000017 ORTHO05D000013 6.6e-06 54.7 142 31.7
MSTRG.20465 Avicennia marina HOM05D000017 ORTHO05D000013 6.6e-06 54.7 142 32.4
Ciclev10027875m.g Citrus clementina HOM05D000017 ORTHO05D000013 6.6e-06 54.7 142 32.4
ECA247G3997 Erigeron canadensis HOM05D000017 ORTHO05D000013 6.6e-06 54.7 138 31.2
Migut.B01118 Erythranthe guttata HOM05D000017 ORTHO05D000013 6.6e-06 54.7 138 31.9
Eucgr.C04380 Eucalyptus grandis HOM05D000017 ORTHO05D000013 6.6e-06 54.7 133 24.1
Thhalv10020135m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 6.6e-06 54.7 142 31.7
Lj5g0003322 Lotus japonicus HOM05D000017 ORTHO05D000013 6.6e-06 54.7 138 26.8
MD05G1203600 Malus domestica HOM05D000017 ORTHO05D000013 6.6e-06 54.7 140 31.4
MD10G1190900 Malus domestica HOM05D000017 ORTHO05D000013 6.6e-06 54.7 140 31.4
Oeu038469.1 Olea europaea HOM05D000017 ORTHO05D000013 6.6e-06 54.7 141 31.9
PSO210G2055 Papaver somniferum HOM05D000017 ORTHO05D000013 6.6e-06 54.7 137 24.8
QL11p027748 Quercus lobata HOM05D000017 ORTHO05D000013 6.6e-06 54.7 137 30.7
Rhsim01G0268100 Rhododendron simsii HOM05D000017 ORTHO05D000013 6.6e-06 54.7 142 31.7
Rhsim12G0074300 Rhododendron simsii HOM05D000017 ORTHO05D000013 6.6e-06 54.7 142 32.4
RcHm_v2.0_Chr6g0289171 Rosa chinensis HOM05D000017 ORTHO05D000013 6.6e-06 54.7 139 31.7
Sabra02G0130100 Salix brachista HOM05D000017 ORTHO05D000013 6.6e-06 54.7 136 25.0
Sp6g27650 Schrenkiella parvula HOM05D000017 ORTHO05D000013 6.6e-06 54.7 121 31.4
TPR.G21821 Trifolium pratense HOM05D000017 ORTHO05D000013 6.6e-06 54.7 138 30.4
TWI36G0574 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 6.6e-06 54.7 142 33.1
AL6G27450 Arabidopsis lyrata HOM05D000017 ORTHO05D000013 8.7e-06 54.3 121 30.6
COL.COLO4_15401 Corchorus olitorius HOM05D000017 ORTHO05D000013 8.7e-06 54.3 141 31.2
Thhalv10015777m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 8.7e-06 54.3 121 30.6
HanXRQChr10g0314361 Helianthus annuus HOM05D000017 ORTHO05D000013 8.7e-06 54.3 135 25.9
Hma1.2p1_1493F.1_g286800 Hydrangea macrophylla HOM05D000017 ORTHO05D014080 8.7e-06 54.3 82 32.9
QL03p028447 Quercus lobata HOM05D000017 ORTHO05D000013 8.7e-06 54.3 142 32.4
Sabra06G0045800 Salix brachista HOM05D000017 ORTHO05D000013 8.7e-06 54.3 133 25.6
Sabra19G0017600 Salix brachista HOM05D000017 ORTHO05D000013 8.7e-06 54.3 142 31.0
Sabra19G0024700 Salix brachista HOM05D000017 ORTHO05D000013 8.7e-06 54.3 142 31.0
VMungo0720G2962 Vigna mungo HOM05D000017 ORTHO05D000013 8.7e-06 54.3 141 31.2


User provided reference genes

Program Settings