Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.04g154590 Amaranthus hybridus HOM05D007633 ORTHO05D008817 2.9e-157 558.5 285 100.0
EL10Ac3g06495 Beta vulgaris HOM05D007633 ORTHO05D008817 2.3e-53 213.4 257 48.6
AUR62043551 Chenopodium quinoa HOM05D007633 ORTHO05D008817 1.8e-50 203.8 189 52.9
Hund12119 Selenicereus undatus HOM05D007633 ORTHO05D008817 1.8e-50 203.8 228 47.4
AUR62034710 Chenopodium quinoa HOM05D007633 ORTHO05D008817 6.5e-48 195.3 192 50.5
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 3.2e-39 166.4 282 36.2
Gohir.A09G053600 Gossypium hirsutum HOM05D007633 ORTHO05D008817 9.1e-34 148.3 247 40.1
QL06p002095 Quercus lobata HOM05D007633 ORTHO05D008817 5.9e-33 145.6 241 35.3
RcHm_v2.0_Chr4g0415951 Rosa chinensis HOM05D007633 ORTHO05D008817 3.8e-32 142.9 261 36.4
Thecc.04G233700 Theobroma cacao HOM05D007633 ORTHO05D008817 5.0e-32 142.5 249 38.6
Potri.008G154200 Populus trichocarpa HOM05D007633 ORTHO05D008817 8.5e-32 141.7 248 36.7
Dinv14003 Davidia involucrata HOM05D007633 ORTHO05D008817 1.1e-31 141.4 197 40.1
CSS0018565 Camellia sinensis var. sinensis HOM05D007633 ORTHO05D008817 2.5e-31 140.2 246 35.8
PGR004G0463 Punica granatum HOM05D007633 ORTHO05D008817 2.5e-31 140.2 230 37.8
MELO3C006526.2 Cucumis melo HOM05D007633 ORTHO05D008817 5.5e-31 139.0 241 36.9
Rhsim02G0025900 Rhododendron simsii HOM05D007633 ORTHO05D008817 5.5e-31 139.0 204 36.3
FAN22G0362 Fragaria x ananassa HOM05D007633 ORTHO05D008817 1.2e-30 137.9 265 35.5
Gorai.006G055000 Gossypium raimondii HOM05D007633 ORTHO05D008817 1.2e-30 137.9 253 38.7
Eucgr.H03451 Eucalyptus grandis HOM05D007633 ORTHO05D008817 2.7e-30 136.7 266 34.2
CANSAT78G1135 Cannabis sativa HOM05D007633 ORTHO05D008817 3.6e-30 136.3 263 34.6
FAN02G3335 Fragaria x ananassa HOM05D007633 ORTHO05D008817 4.7e-30 136.0 265 35.8
Gohir.D09G053050 Gossypium hirsutum HOM05D007633 ORTHO05D008817 4.7e-30 136.0 247 39.3
TAR636G0739 Trochodendron aralioides HOM05D007633 ORTHO05D008817 7.9e-30 135.2 249 34.9
CsaV3_3G013230 Cucumis sativus L. HOM05D007633 ORTHO05D008817 1.0e-29 134.8 247 36.4
Cfa015662 Carpinus fangiana HOM05D007633 ORTHO05D008817 1.8e-29 134.0 260 34.6
Hma1.2p1_0745F.1_g212150 Hydrangea macrophylla HOM05D007633 ORTHO05D008817 3.0e-29 133.3 256 35.2
FvH4_4g16290 Fragaria vesca HOM05D007633 ORTHO05D008817 6.7e-29 132.1 250 36.0
FAN12G0707 Fragaria x ananassa HOM05D007633 ORTHO05D008817 6.7e-29 132.1 250 36.0
Haze_00885 Corylus avellana HOM05D007633 ORTHO05D008817 2.6e-28 130.2 263 33.1
Actinidia36954 Actinidia chinensis HOM05D007633 ORTHO05D008817 3.3e-28 129.8 247 36.0
GSVIVG01017995001 Vitis vinifera HOM05D007633 ORTHO05D008817 3.3e-28 129.8 248 35.5
Atru.chr4.2449 Acer truncatum HOM05D007633 ORTHO05D008817 4.4e-28 129.4 258 34.5
Prupe.1G015500 Prunus persica HOM05D007633 ORTHO05D008817 1.7e-27 127.5 155 41.9
Potri.010G086300 Populus trichocarpa HOM05D007633 ORTHO05D008817 2.2e-27 127.1 248 35.1
Glyma.11G006100 Glycine max HOM05D007633 ORTHO05D008817 2.8e-27 126.7 258 33.7
Manes.03G177200 Manihot esculenta HOM05D007633 ORTHO05D008817 3.7e-27 126.3 251 34.3
Nitab4.5_0008118g0020 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.1e-26 124.8 253 32.0
HanXRQChr02g0035611 Helianthus annuus HOM05D007633 ORTHO05D008817 1.8e-26 124.0 206 36.9
LjContig00408g0001251 Lotus japonicus HOM05D007633 ORTHO05D008817 2.4e-26 123.6 273 32.2
Ca_24403_v3 Cicer arietinum L. HOM05D007633 ORTHO05D008817 7.0e-26 122.1 229 34.5
Ciclev10005651m.g Citrus clementina HOM05D007633 ORTHO05D008817 2.6e-25 120.2 261 33.0
Nn1g02349 Nelumbo nucifera HOM05D007633 ORTHO05D008817 2.6e-25 120.2 248 32.7
Psat4g209480 Pisum sativum HOM05D007633 ORTHO05D008817 5.9e-25 119.0 291 31.3
Aqoxy2G03409 Aquilegia oxysepala HOM05D007633 ORTHO05D008817 7.7e-25 118.6 221 34.4
MSTRG.21860 Avicennia marina HOM05D007633 ORTHO05D008817 1.3e-24 117.9 233 31.8
Sabra10G0057400 Salix brachista HOM05D007633 ORTHO05D008817 1.3e-24 117.9 235 34.5
CiPaw.01G167500 Carya illinoinensis HOM05D007633 ORTHO05D008817 2.9e-24 116.7 252 33.3
Oeu011618.1 Olea europaea HOM05D007633 ORTHO05D008817 2.9e-24 116.7 209 33.5
Cc03_g03920 Coffea canephora HOM05D007633 ORTHO05D008817 3.8e-24 116.3 241 34.0
MD16G1195500 Malus domestica HOM05D007633 ORTHO05D008817 6.5e-24 115.5 246 32.9
TPR.G38043 Trifolium pratense HOM05D007633 ORTHO05D008817 8.5e-24 115.2 147 40.1
Glyma.01G237200 Glycine max HOM05D007633 ORTHO05D008817 1.9e-23 114.0 257 33.5
Sed0010969 Sechium edule HOM05D007633 ORTHO05D008817 4.2e-23 112.8 162 38.3
Duzib212G0599 Durio zibethinus HOM05D007633 ORTHO05D008817 9.4e-23 111.7 159 42.1
PGSC0003DMG400032254 Solanum tuberosum HOM05D007633 ORTHO05D008817 2.1e-22 110.5 234 32.5
TWI73G0352 Tripterygium wilfordii HOM05D007633 ORTHO05D008817 2.1e-22 110.5 257 32.7
Nitab4.5_0001342g0010 Nicotiana tabacum HOM05D007633 ORTHO05D008817 6.1e-22 109.0 238 31.5
vmacro15349 Vaccinium macrocarpon HOM05D007633 ORTHO05D008817 5.2e-21 105.9 220 30.0
Sopen09g031040 Solanum pennellii HOM05D007633 ORTHO05D008817 1.1e-20 104.8 237 31.6
Solyc09g082160.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 1.5e-20 104.4 234 31.2
Lalb_Chr01g0013131 Lupinus albus HOM05D007633 ORTHO05D008817 2.6e-20 103.6 264 34.5
Phvul.002G044600 Phaseolus vulgaris HOM05D007633 ORTHO05D008817 2.6e-20 103.6 258 31.4
Sopen06g019290 Solanum pennellii HOM05D007633 ORTHO05D008817 2.6e-20 103.6 151 37.1
ATR0697G107 Amborella trichopoda HOM05D007633 ORTHO05D008817 3.3e-20 103.2 251 30.3
Medtr5g006410 Medicago truncatula HOM05D007633 ORTHO05D008817 4.4e-20 102.8 265 31.7
ECA240G3784 Erigeron canadensis HOM05D000137 ORTHO05D000452 9.7e-20 101.7 162 36.4
FAN07G1430 Fragaria x ananassa HOM05D007633 ORTHO05D008817 1.7e-19 100.9 200 36.5
Nitab4.5_0000321g0150 Nicotiana tabacum HOM05D007633 ORTHO05D008817 3.7e-19 99.8 252 30.2
Peaxi162Scf00192g01119 Petunia axillaris HOM05D007633 ORTHO05D008817 4.8e-19 99.4 251 30.3
HPP92_006116 Vanilla planifolia HOM05D007633 ORTHO05D008817 7.0e-18 95.5 249 29.7
Solyc06g054140.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 1.2e-17 94.7 151 35.1
Lsat_1_v5_gn_7_64401 Lactuca sativa HOM05D007633 ORTHO05D008817 2.0e-17 94.0 232 29.3
VMungo1215G1793 Vigna mungo HOM05D007633 ORTHO05D008817 2.0e-17 94.0 271 29.5
PSO761G0330 Papaver somniferum HOM05D007633 ORTHO05D008817 4.5e-17 92.8 244 31.1
Nitab4.5_0001920g0040 Nicotiana tabacum HOM05D007633 ORTHO05D008817 5.9e-17 92.4 190 32.1
Migut.N00191 Erythranthe guttata HOM05D007633 ORTHO05D008817 1.3e-16 91.3 226 30.1
Peaxi162Scf00092g00615 Petunia axillaris HOM05D007633 ORTHO05D008817 1.3e-16 91.3 258 29.8
Lsat_1_v5_gn_8_155361 Lactuca sativa HOM05D007633 ORTHO05D008817 2.9e-16 90.1 122 36.9
SalBow3G0862 Salvia bowleyana HOM05D007633 ORTHO05D008817 5.0e-16 89.4 237 31.2
THA.LOC104826165 Tarenaya hassleriana HOM05D012198 ORTHO05D008817 1.1e-15 88.2 261 30.7
CDE07G1037 Ceratophyllum demersum HOM05D007633 ORTHO05D008817 5.5e-15 85.9 160 33.1
Thhalv10008449m.g Eutrema salsugineum HOM05D012198 ORTHO05D008817 5.5e-15 85.9 267 28.8
PSO210G0191 Papaver somniferum HOM05D007633 ORTHO05D008817 7.2e-15 85.5 242 29.8
Carub.0001s0476 Capsella rubella HOM05D012198 ORTHO05D008817 1.2e-14 84.7 265 30.9
ClCG05G005110 Citrullus lanatus HOM05D007633 ORTHO05D008817 1.2e-14 84.7 137 38.7
PSO210G6592 Papaver somniferum HOM05D007633 ORTHO05D008817 2.7e-14 83.6 233 26.6
AL1G15270 Arabidopsis lyrata HOM05D012198 ORTHO05D008817 8.0e-14 82.0 228 29.4
VMungo1215G1192 Vigna mungo HOM05D007633 ORTHO05D008817 1.2e-12 78.2 272 26.8
arahy.Tifrunner.gnm1.ann1.5LNY8Z Arachis hypogaea HOM05D007633 ORTHO05D008817 7.5e-12 75.5 192 33.3
PSO761G0485 Papaver somniferum HOM05D007633 ORTHO05D008817 1.7e-11 74.3 234 25.2
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 3.7e-11 73.2 270 28.1
SEGI_17234 Sequoiadendron giganteum HOM05D007633 ORTHO05D008817 8.3e-11 72.0 167 31.1
arahy.Tifrunner.gnm1.ann1.VQRK5I Arachis hypogaea HOM05D007633 ORTHO05D008817 1.8e-10 70.9 192 33.3
PGSC0003DMG400016306 Solanum tuberosum HOM05D007633 ORTHO05D008817 1.0e-08 65.1 99 35.4
MD07G1251800 Malus domestica HOM05D007633 ORTHO05D008817 2.5e-07 60.5 51 52.9
AagrBONN_evm.TU.Sc2ySwM_117.1122 Anthoceros agrestis HOM05D020856 ORTHO05D018339 4.2e-07 59.7 135 25.9
Cpa.g.sc58.92 Carica papaya HOM05D000003 ORTHO05D000004 1.2e-06 58.2 50 54.0
TWI73G0180 Tripterygium wilfordii HOM05D007633 ORTHO05D008817 6.1e-06 55.8 103 34.0


User provided reference genes

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