Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.04g152890 Amaranthus hybridus HOM05D019862 ORTHO05D015815 5.4e-214 747.3 350 100.0
Ah.04g152910 Amaranthus hybridus HOM05D019862 ORTHO05D015815 5.4e-214 747.3 350 100.0
Ah.04g153140 Amaranthus hybridus HOM05D019862 ORTHO05D015815 1.2e-192 676.4 350 90.6
Ah.04g152960 Amaranthus hybridus HOM05D019862 ORTHO05D015815 4.9e-191 671.0 351 90.6
DCAR_028460 Daucus carota HOM05D019862 ORTHO05D011819 2.0e-54 217.2 357 38.9
AUR62044040 Chenopodium quinoa HOM05D015770 ORTHO05D015815 1.8e-20 104.4 310 27.4
AUR62006472 Chenopodium quinoa HOM05D015770 ORTHO05D015815 4.1e-20 103.2 310 27.1
AUR62032909 Chenopodium quinoa HOM05D015770 ORTHO05D015815 5.4e-20 102.8 310 27.1
AUR62011850 Chenopodium quinoa HOM05D015770 ORTHO05D015815 9.1e-20 102.1 310 27.1
COL.COLO4_05074 Corchorus olitorius HOM05D009781 ORTHO05D011819 1.2e-19 101.7 271 28.4
Thecc.07G157200 Theobroma cacao HOM05D009781 ORTHO05D011819 7.7e-19 99.0 282 29.4
AUR62038282 Chenopodium quinoa HOM05D018784 ORTHO05D024979 4.0e-15 86.7 167 35.3
AUR62040278 Chenopodium quinoa HOM05D018784 ORTHO05D024979 4.0e-15 86.7 167 35.3
AUR62044727 Chenopodium quinoa HOM05D018784 ORTHO05D024979 4.0e-15 86.7 167 35.3
Gohir.A11G324800 Gossypium hirsutum HOM05D009781 ORTHO05D011819 1.5e-14 84.7 190 29.5
Gohir.A06G047400 Gossypium hirsutum HOM05D009781 ORTHO05D011819 5.7e-14 82.8 148 33.1
Gohir.A06G037300 Gossypium hirsutum HOM05D009781 ORTHO05D011819 7.5e-14 82.4 176 33.5
DCAR_009575 Daucus carota HOM05D018784 ORTHO05D024979 9.8e-14 82.0 195 30.8
Gorai.002G247600 Gossypium raimondii HOM05D009781 ORTHO05D011819 9.8e-14 82.0 206 28.2
Gohir.D06G037800 Gossypium hirsutum HOM05D009781 ORTHO05D011819 1.3e-13 81.6 187 29.4
Gohir.D06G036900 Gossypium hirsutum HOM05D009781 ORTHO05D011819 1.7e-13 81.3 148 32.4
Gorai.010G041400 Gossypium raimondii HOM05D009781 ORTHO05D011819 1.7e-13 81.3 148 32.4
Gohir.D08G028000 Gossypium hirsutum HOM05D009781 ORTHO05D011819 3.7e-13 80.1 187 27.8
Gohir.D06G026000 Gossypium hirsutum HOM05D009781 ORTHO05D011819 4.9e-13 79.7 176 30.7
Gohir.D06G038800 Gossypium hirsutum HOM05D009781 ORTHO05D011819 4.9e-13 79.7 187 27.3
Gohir.A06G029200 Gossypium hirsutum HOM05D009781 ORTHO05D011819 6.3e-13 79.3 176 30.7
Gohir.D06G025700 Gossypium hirsutum HOM05D009781 ORTHO05D011819 8.3e-13 79.0 113 37.2
Gohir.D06G038600 Gossypium hirsutum HOM05D009781 ORTHO05D011819 8.3e-13 79.0 143 33.6
Gohir.A06G044600 Gossypium hirsutum HOM05D009781 ORTHO05D011819 2.4e-12 77.4 167 29.3
Gohir.D06G027100 Gossypium hirsutum HOM05D009781 ORTHO05D011819 4.1e-12 76.6 113 36.3
Gohir.D06G036500 Gossypium hirsutum HOM05D009781 ORTHO05D011819 5.4e-12 76.3 142 34.5
Gorai.010G040800 Gossypium raimondii HOM05D009781 ORTHO05D011819 5.4e-12 76.3 142 34.5
COL.COLO4_09257 Corchorus olitorius HOM05D009781 ORTHO05D011819 9.2e-12 75.5 189 28.6
Gohir.A06G038742 Gossypium hirsutum HOM05D009781 ORTHO05D011819 4.5e-11 73.2 145 32.4
Gohir.D06G028300 Gossypium hirsutum HOM05D009781 ORTHO05D011819 7.8e-11 72.4 197 28.9
DCAR_015759 Daucus carota HOM05D019862 ORTHO05D015815 1.3e-10 71.6 86 41.9
Gohir.A06G038600 Gossypium hirsutum HOM05D009781 ORTHO05D011819 1.1e-09 68.6 118 30.5
COL.COLO4_09593 Corchorus olitorius HOM05D014846 ORTHO05D016249 4.7e-08 63.2 216 28.2
COL.COLO4_09850 Corchorus olitorius HOM05D014846 ORTHO05D016249 3.1e-07 60.5 199 28.1


User provided reference genes

Program Settings