Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 1.6e-233 812.4 407 100.0
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 1.2e-151 540.4 332 79.5
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 3.4e-151 538.9 332 77.7
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 4.9e-150 535.0 335 77.0
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 8.1e-145 517.7 332 74.1
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 1.3e-142 510.4 332 74.4
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 1.9e-141 506.5 332 72.9
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 4.2e-141 505.4 331 74.3
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 5.4e-141 505.0 332 72.0
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 1.5e-138 496.9 334 71.3
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 4.3e-138 495.4 333 71.2
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 5.6e-138 495.0 338 71.0
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 7.4e-138 494.6 336 71.4
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 3.7e-137 492.3 332 70.5
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 3.7e-137 492.3 336 70.8
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 1.8e-136 490.0 332 70.5
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 1.8e-136 490.0 335 71.0
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 4.0e-136 488.8 333 70.6
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 1.5e-135 486.9 334 70.1
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.5e-135 486.9 334 70.1
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 2.0e-135 486.5 336 69.0
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 2.0e-135 486.5 336 69.0
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 3.4e-135 485.7 336 68.8
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 4.5e-135 485.3 333 69.7
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 5.8e-135 485.0 341 67.2
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 7.6e-135 484.6 340 68.2
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 2.9e-134 482.6 333 69.1
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 2.9e-134 482.6 332 69.9
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 2.9e-134 482.6 332 69.3
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 3.8e-134 482.3 341 67.2
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 4.9e-134 481.9 333 70.3
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 4.9e-134 481.9 339 69.0
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 8.4e-134 481.1 344 66.3
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 8.4e-134 481.1 336 67.6
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 8.4e-134 481.1 341 66.6
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 1.4e-133 480.3 332 68.1
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 1.4e-133 480.3 334 69.8
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 1.4e-133 480.3 333 69.1
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 1.9e-133 479.9 336 67.9
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 1.9e-133 479.9 334 68.3
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 2.5e-133 479.6 334 69.8
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 2.5e-133 479.6 334 69.5
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 3.2e-133 479.2 332 67.8
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 4.2e-133 478.8 342 66.4
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 4.2e-133 478.8 332 68.4
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 4.2e-133 478.8 332 69.3
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 9.3e-133 477.6 332 69.3
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 1.2e-132 477.2 334 69.2
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 1.6e-132 476.9 336 68.2
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 2.1e-132 476.5 335 67.5
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 2.1e-132 476.5 344 67.4
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 7.9e-132 474.6 336 69.3
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 7.9e-132 474.6 332 67.5
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 1.0e-131 474.2 336 67.6
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 1.0e-131 474.2 338 68.3
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 1.8e-131 473.4 335 68.4
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 3.0e-131 472.6 333 67.6
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 3.9e-131 472.2 345 66.4
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 3.9e-131 472.2 332 66.9
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 3.9e-131 472.2 337 67.4
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 6.7e-131 471.5 332 67.8
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 6.7e-131 471.5 333 67.0
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 8.7e-131 471.1 333 66.7
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 1.1e-130 470.7 332 67.8
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 1.5e-130 470.3 336 67.6
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 1.5e-130 470.3 335 68.7
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 1.9e-130 469.9 333 66.7
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 2.5e-130 469.5 332 66.0
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 3.3e-130 469.2 338 67.2
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 4.3e-130 468.8 332 67.8
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 4.3e-130 468.8 332 68.1
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 4.3e-130 468.8 332 67.5
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 9.6e-130 467.6 332 67.5
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.3e-129 467.2 345 64.9
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 2.1e-129 466.5 337 65.6
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 2.1e-129 466.5 336 65.8
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 2.8e-129 466.1 333 66.1
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 6.2e-129 464.9 336 65.5
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 8.2e-129 464.5 335 66.9
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 1.4e-128 463.8 341 65.1
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 1.8e-128 463.4 334 67.1
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 5.3e-128 461.8 338 66.3
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 5.3e-128 461.8 347 65.1
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 6.9e-128 461.5 332 65.1
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 6.9e-128 461.5 333 66.1
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 1.2e-127 460.7 334 66.2
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 1.5e-127 460.3 338 65.4
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 1.5e-127 460.3 336 67.0
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.0e-127 459.9 341 66.6
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 2.0e-127 459.9 345 64.3
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 2.0e-127 459.9 332 67.2
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 3.4e-127 459.1 379 60.2
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 4.5e-127 458.8 344 63.7
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 7.6e-127 458.0 338 65.1
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 7.6e-127 458.0 336 66.7
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 1.0e-126 457.6 332 66.3
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.3e-126 457.2 333 65.8
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 2.9e-126 456.1 337 65.9
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 6.5e-126 454.9 336 64.0
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 6.5e-126 454.9 339 64.0
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 1.1e-125 454.1 337 65.6
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 2.5e-125 453.0 333 64.9
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 4.2e-125 452.2 341 64.5
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 4.2e-125 452.2 342 64.3
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.1e-124 449.9 341 64.2
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 2.1e-124 449.9 336 64.6
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 2.1e-124 449.9 331 64.4
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 5.1e-123 445.3 339 65.5
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 8.7e-123 444.5 332 63.6
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 4.3e-122 442.2 339 64.6
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 5.7e-122 441.8 341 61.9
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 9.7e-122 441.0 333 63.1
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 1.6e-121 440.3 334 62.0
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 2.2e-121 439.9 333 62.5
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 1.1e-120 437.6 339 62.5
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 3.1e-120 436.0 337 62.0
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 6.9e-120 434.9 339 64.9
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 2.9e-118 429.5 334 62.9
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 8.5e-118 427.9 336 63.1
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 1.9e-117 426.8 333 59.8
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 7.2e-117 424.9 332 59.6
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 2.1e-116 423.3 349 59.9
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 2.7e-116 422.9 332 61.1
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 2.7e-116 422.9 332 60.8
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 5.7e-114 415.2 335 61.2
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 9.7e-114 414.5 334 59.0
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 6.3e-113 411.8 335 57.6
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 1.8e-112 410.2 342 59.9
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 3.4e-111 406.0 341 56.9
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 5.1e-107 392.1 291 64.9
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 4.8e-105 385.6 270 70.7
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 7.0e-104 381.7 296 62.2
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 3.6e-100 369.4 329 56.8
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 5.7e-98 362.1 294 61.2
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 2.9e-94 349.7 332 54.2
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 7.7e-87 325.1 332 51.8
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 8.5e-86 321.6 255 63.9
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 7.3e-69 265.4 274 48.2
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 5.2e-67 259.2 336 42.0
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.1e-64 251.5 156 73.1
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.5e-61 241.1 194 62.4
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 1.8e-59 234.2 332 39.5
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.4e-56 224.6 175 64.6
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 4.6e-55 219.5 224 54.5
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 4.0e-51 206.5 339 33.6
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 9.9e-50 201.8 148 64.9
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.2e-42 178.3 124 71.8
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.4e-40 171.4 107 77.6
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 6.4e-33 146.0 85 72.9
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.4e-32 144.8 85 72.9
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 1.9e-32 144.4 195 42.6
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.2e-32 143.7 85 71.8
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.5e-31 140.2 85 70.6
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 8.7e-30 135.6 185 44.9
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 2.5e-29 134.0 131 53.4
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 2.4e-27 127.5 138 48.6
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 5.3e-27 126.3 76 82.9
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 3.4e-26 123.6 106 62.3
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 3.4e-26 123.6 186 44.1
Ah.05g174690 Amaranthus hybridus HOM05D027578 ORTHO05D021202 2.4e-24 117.5 65 90.8
Ah.11g041650 Amaranthus hybridus HOM05D000353 ORTHO05D000174 1.5e-21 108.2 65 81.5
Ah.16g107200 Amaranthus hybridus HOM05D027578 ORTHO05D000174 5.6e-21 106.3 65 80.0
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 1.2e-18 98.6 144 36.1
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 2.2e-17 94.4 76 63.2
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 8.4e-17 92.4 59 71.2
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 1.3e-14 85.1 149 31.5
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 3.0e-14 84.0 76 55.3
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.9e-14 83.6 46 73.9
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.1e-13 82.0 80 51.2
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 2.1e-12 77.8 49 69.4
Ah.06g184250 Amaranthus hybridus HOM05D027578 ORTHO05D000174 1.1e-11 75.5 46 82.6
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 5.8e-10 69.7 44 75.0
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 5.8e-10 69.7 41 85.4
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 7.6e-10 69.3 67 50.7
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 1.7e-09 68.2 40 80.0
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 1.7e-09 68.2 40 80.0
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.8e-09 67.0 39 79.5
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 6.5e-09 66.2 83 44.6
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 1.1e-08 65.5 39 82.1
PRCOL_00004577 Prasinoderma coloniale HOM05D003641 ORTHO05D049026 3.5e-07 60.5 158 27.2
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 1.3e-06 58.5 168 30.4
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 3.0e-06 57.4 98 35.7
arahy.Tifrunner.gnm1.ann1.5I9U23 Arachis hypogaea HOM05D003641 ORTHO05D085625 3.9e-06 57.0 126 35.7


User provided reference genes

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