Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.04g152020 Amaranthus hybridus HOM05D004651 ORTHO05D005761 8.5e-60 233.4 113 100.0
Ah.13g076160 Amaranthus hybridus HOM05D004651 ORTHO05D005761 5.3e-54 214.2 114 91.2
EL10Ac3g06986 Beta vulgaris HOM05D004651 ORTHO05D005761 1.5e-51 206.1 114 86.8
AUR62024379 Chenopodium quinoa HOM05D004651 ORTHO05D005761 6.7e-49 197.2 114 85.1
AUR62025977 Chenopodium quinoa HOM05D004651 ORTHO05D005761 1.5e-48 196.1 111 83.8
CSS0019774 Camellia sinensis var. sinensis HOM05D004651 ORTHO05D005761 5.7e-48 194.1 107 84.1
CSS0028305 Camellia sinensis var. sinensis HOM05D004651 ORTHO05D005761 5.7e-48 194.1 107 84.1
Actinidia38568 Actinidia chinensis HOM05D004651 ORTHO05D005761 3.7e-47 191.4 109 81.7
Cc06_g16440 Coffea canephora HOM05D004651 ORTHO05D005761 3.7e-47 191.4 111 81.1
Sc19g0006860 Simmondsia chinensis HOM05D004651 ORTHO05D005761 1.4e-46 189.5 111 78.4
Dinv18101 Davidia involucrata HOM05D000001 ORTHO05D000003 1.8e-46 189.1 107 83.2
Hma1.2p1_0856F.1_g229150 Hydrangea macrophylla HOM05D004651 ORTHO05D005761 9.1e-46 186.8 117 76.1
Dinv24113 Davidia involucrata HOM05D004651 ORTHO05D005761 5.9e-45 184.1 109 78.9
SGA_v2.0_scaffold105G30461 Striga asiatica HOM05D004651 ORTHO05D005761 1.0e-44 183.3 109 78.0
DCAR_013570 Daucus carota HOM05D004651 ORTHO05D005761 2.2e-44 182.2 108 77.8
Rhsim03G0011100 Rhododendron simsii HOM05D004651 ORTHO05D005761 2.9e-44 181.8 111 77.5
Oeu033769.1 Olea europaea HOM05D004651 ORTHO05D005761 6.5e-44 180.6 103 79.6
Nitab4.5_0000603g0080 Nicotiana tabacum HOM05D004651 ORTHO05D005761 2.5e-43 178.7 105 76.2
Sabra06G0040200 Salix brachista HOM05D004651 ORTHO05D005761 3.2e-43 178.3 107 77.6
Glyma.02G174400 Glycine max HOM05D004651 ORTHO05D005761 5.5e-43 177.6 104 76.9
Potri.006G056900 Populus trichocarpa HOM05D004651 ORTHO05D005761 5.5e-43 177.6 105 76.2
MSTRG.6460 Avicennia marina HOM05D004651 ORTHO05D005761 7.2e-43 177.2 103 77.7
Peaxi162Scf00406g00069 Petunia axillaris HOM05D004651 ORTHO05D005761 7.2e-43 177.2 105 76.2
Sopen02g030210 Solanum pennellii HOM05D004651 ORTHO05D005761 9.4e-43 176.8 105 77.1
Glyma.10G093900 Glycine max HOM05D004651 ORTHO05D005761 1.2e-42 176.4 104 76.0
GSVIVG01033348001 Vitis vinifera HOM05D000001 ORTHO05D000003 1.2e-42 176.4 107 74.8
CDE05G0104 Ceratophyllum demersum HOM05D004651 ORTHO05D005761 2.1e-42 175.6 104 77.9
HanXRQChr10g0294281 Helianthus annuus HOM05D004651 ORTHO05D005761 2.1e-42 175.6 102 77.5
Nitab4.5_0003477g0030 Nicotiana tabacum HOM05D004651 ORTHO05D005761 2.7e-42 175.3 104 76.9
Solyc02g085540.1 Solanum lycopersicum HOM05D004651 ORTHO05D005761 2.7e-42 175.3 105 76.2
PGSC0003DMG400012662 Solanum tuberosum HOM05D004651 ORTHO05D005761 2.7e-42 175.3 105 76.2
Phvul.007G256600 Phaseolus vulgaris HOM05D004651 ORTHO05D005761 3.6e-42 174.9 116 73.3
Sed0027459 Sechium edule HOM05D004651 ORTHO05D005761 3.6e-42 174.9 111 72.1
ClCG04G000490 Citrullus lanatus HOM05D004651 ORTHO05D005761 8.0e-42 173.7 110 70.9
Aqoxy2G00117 Aquilegia oxysepala HOM05D004651 ORTHO05D005761 1.0e-41 173.3 107 73.8
Manes.09G030500 Manihot esculenta HOM05D004651 ORTHO05D005761 1.0e-41 173.3 110 70.9
Lsat_1_v5_gn_9_27580 Lactuca sativa HOM05D004651 ORTHO05D005761 1.4e-41 172.9 102 76.5
Nitab4.5_0001347g0050 Nicotiana tabacum HOM05D004651 ORTHO05D005761 1.4e-41 172.9 101 79.2
Cfa016877 Carpinus fangiana HOM05D004651 ORTHO05D005761 3.0e-41 171.8 109 75.2
Migut.J01795 Erythranthe guttata HOM05D004651 ORTHO05D005761 3.0e-41 171.8 103 77.7
Lsat_1_v5_gn_5_163881 Lactuca sativa HOM05D006723 ORTHO05D008194 5.2e-41 171.0 102 74.5
MD14G1064400 Malus domestica HOM05D004651 ORTHO05D005761 5.2e-41 171.0 95 81.1
QL07p022191 Quercus lobata HOM05D004651 ORTHO05D005761 6.8e-41 170.6 109 72.5
arahy.Tifrunner.gnm1.ann1.F3K4LC Arachis hypogaea HOM05D005399 ORTHO05D006347 8.8e-41 170.2 104 76.0
Haze_19923 Corylus avellana HOM05D004651 ORTHO05D005761 8.8e-41 170.2 108 75.0
SGA_v2.0_scaffold94G28447 Striga asiatica HOM05D004651 ORTHO05D005761 8.8e-41 170.2 109 71.6
TAR623G0603 Trochodendron aralioides HOM05D004651 ORTHO05D005761 8.8e-41 170.2 112 71.4
Nn2g15489 Nelumbo nucifera HOM05D004651 ORTHO05D005761 1.2e-40 169.9 109 71.6
Potri.016G051400 Populus trichocarpa HOM05D004651 ORTHO05D005761 1.5e-40 169.5 107 72.0
HPP92_022788 Vanilla planifolia HOM05D004651 ORTHO05D005761 1.5e-40 169.5 108 75.0
CDE05G0718 Ceratophyllum demersum HOM05D004651 ORTHO05D005761 2.0e-40 169.1 108 72.2
MD12G1064300 Malus domestica HOM05D004651 ORTHO05D005761 2.0e-40 169.1 95 81.1
Sabra16G0055100 Salix brachista HOM05D004651 ORTHO05D005761 3.4e-40 168.3 107 71.0
CANSAT80G2258 Cannabis sativa HOM05D004651 ORTHO05D005761 4.4e-40 167.9 96 78.1
CiPaw.09G033900 Carya illinoinensis HOM05D004651 ORTHO05D005761 7.5e-40 167.2 105 74.3
Zm00001eb316630 Zea mays HOM05D004651 ORTHO05D005761 9.8e-40 166.8 102 71.6
MELO3C026725.2 Cucumis melo HOM05D004651 ORTHO05D005761 1.7e-39 166.0 99 74.7
MD07G1000900 Malus domestica HOM05D004651 ORTHO05D005761 1.7e-39 166.0 89 83.1
RcHm_v2.0_Chr3g0480781 Rosa chinensis HOM05D004651 ORTHO05D005761 1.7e-39 166.0 95 78.9
CsaV3_4G011920 Cucumis sativus L. HOM05D004651 ORTHO05D005761 2.2e-39 165.6 99 75.8
Nitab4.5_0004063g0110 Nicotiana tabacum HOM05D004651 ORTHO05D005761 2.2e-39 165.6 101 76.2
CiPaw.10G029700 Carya illinoinensis HOM05D004651 ORTHO05D005761 2.8e-39 165.2 106 72.6
Lj5g0006028 Lotus japonicus HOM05D004651 ORTHO05D005761 2.8e-39 165.2 107 72.0
FAN02G2491 Fragaria x ananassa HOM05D004651 ORTHO05D005761 3.7e-39 164.9 96 77.1
HanXRQChr13g0391011 Helianthus annuus HOM05D004651 ORTHO05D005761 3.7e-39 164.9 96 77.1
Manes.08G047600 Manihot esculenta HOM05D004651 ORTHO05D005761 4.8e-39 164.5 109 70.6
FvH4_6g22990 Fragaria vesca HOM05D004651 ORTHO05D005761 6.3e-39 164.1 95 77.9
FAN09G0537 Fragaria x ananassa HOM05D004651 ORTHO05D005761 6.3e-39 164.1 95 77.9
Zm00001eb034850 Zea mays HOM05D004651 ORTHO05D005761 8.3e-39 163.7 105 69.5
MBI01_g38800_MAGBIO Magnolia biondii HOM05D004651 ORTHO05D005761 1.1e-38 163.3 96 78.1
Lalb_Chr21g0319241 Lupinus albus HOM05D004651 ORTHO05D005761 1.4e-38 162.9 106 71.7
Eucgr.A02412 Eucalyptus grandis HOM05D000001 ORTHO05D000003 1.8e-38 162.5 107 71.0
Migut.K00065 Erythranthe guttata HOM05D004651 ORTHO05D005761 3.1e-38 161.8 111 66.7
FAN05G1131 Fragaria x ananassa HOM05D004651 ORTHO05D005761 3.1e-38 161.8 95 76.8
Prupe.7G069800 Prunus persica HOM05D004651 ORTHO05D005761 3.1e-38 161.8 95 76.8
Thecc.05G165000 Theobroma cacao HOM05D004651 ORTHO05D005761 4.1e-38 161.4 95 78.9
AL5G39450 Arabidopsis lyrata HOM05D004651 ORTHO05D005761 5.4e-38 161.0 109 68.8
AT3G57785 Arabidopsis thaliana HOM05D004651 ORTHO05D005761 5.4e-38 161.0 113 68.1
Cpa.g.sc85.122 Carica papaya HOM05D004651 ORTHO05D005761 9.1e-38 160.2 109 67.9
Gohir.D11G330900 Gossypium hirsutum HOM05D004651 ORTHO05D005761 9.1e-38 160.2 98 77.6
PSO384G0298 Papaver somniferum HOM05D004651 ORTHO05D005761 9.1e-38 160.2 114 67.5
BcaC02g07250 Brassica carinata HOM05D004651 ORTHO05D005761 1.2e-37 159.8 110 68.2
C04p69620 Brassica napus HOM05D004651 ORTHO05D005761 1.2e-37 159.8 110 68.2
BolC4t28461H Brassica oleracea HOM05D004651 ORTHO05D005761 1.2e-37 159.8 110 68.2
BraA04t18667Z Brassica rapa HOM05D004651 ORTHO05D005761 1.2e-37 159.8 110 68.2
COL.COLO4_28721 Corchorus olitorius HOM05D004651 ORTHO05D005761 1.2e-37 159.8 93 79.6
Gohir.D11G330800 Gossypium hirsutum HOM05D004651 ORTHO05D005761 1.2e-37 159.8 98 76.5
Gorai.007G361500 Gossypium raimondii HOM05D004651 ORTHO05D005761 1.2e-37 159.8 79 87.3
Lalb_Chr02g0159821 Lupinus albus HOM05D004651 ORTHO05D005761 1.2e-37 159.8 97 76.3
Ciclev10006760m.g Citrus clementina HOM05D000001 ORTHO05D000003 1.6e-37 159.5 95 76.8
Gorai.007G361600 Gossypium raimondii HOM05D004651 ORTHO05D005761 1.6e-37 159.5 98 77.6
PSO339G4089 Papaver somniferum HOM05D004651 ORTHO05D005761 1.6e-37 159.5 105 69.5
THA.LOC104819088 Tarenaya hassleriana HOM05D004651 ORTHO05D005761 1.6e-37 159.5 111 67.6
Aa31LG10G12520 Aethionema arabicum HOM05D004651 ORTHO05D005761 2.7e-37 158.7 116 66.4
BcaC01g05307 Brassica carinata HOM05D004651 ORTHO05D005761 2.7e-37 158.7 113 67.3
Carub.0005s2464 Capsella rubella HOM05D004651 ORTHO05D005761 2.7e-37 158.7 110 67.3
Sed0009176 Sechium edule HOM05D004651 ORTHO05D005761 3.5e-37 158.3 96 75.0
ECA236G1810 Erigeron canadensis HOM05D004651 ORTHO05D005761 4.5e-37 157.9 93 75.3
Thhalv10006322m.g Eutrema salsugineum HOM05D004651 ORTHO05D005761 4.5e-37 157.9 110 66.4
Peaxi162Scf00285g00014 Petunia axillaris HOM05D004651 ORTHO05D005761 4.5e-37 157.9 105 69.5
TWI34G0893 Tripterygium wilfordii HOM05D004651 ORTHO05D005761 4.5e-37 157.9 107 68.2
TWI34G1227 Tripterygium wilfordii HOM05D004651 ORTHO05D005761 4.5e-37 157.9 107 68.2
Gohir.A11G313600 Gossypium hirsutum HOM05D004651 ORTHO05D005761 5.9e-37 157.5 98 75.5
Os09g0487500 Oryza sativa ssp. japonica HOM05D004651 ORTHO05D005761 5.9e-37 157.5 108 66.7
THA.LOC104802364 Tarenaya hassleriana HOM05D004651 ORTHO05D005761 5.9e-37 157.5 106 69.8
Atru.chr1.949 Acer truncatum HOM05D004651 ORTHO05D005761 7.7e-37 157.1 96 75.0
Gohir.A11G313700 Gossypium hirsutum HOM05D004651 ORTHO05D005761 7.7e-37 157.1 79 87.3
A04p32130 Brassica napus HOM05D004651 ORTHO05D005761 1.0e-36 156.8 108 68.5
A05p02830 Brassica napus HOM05D004651 ORTHO05D005761 1.3e-36 156.4 101 71.3
Sp4g24480 Schrenkiella parvula HOM05D004651 ORTHO05D005761 1.3e-36 156.4 104 69.2
Ca_04847_v3 Cicer arietinum L. HOM05D004651 ORTHO05D005761 1.7e-36 156.0 94 76.6
Psat6g130960 Pisum sativum HOM05D004651 ORTHO05D005761 1.7e-36 156.0 94 75.5
A03p23620 Brassica napus HOM05D004651 ORTHO05D005761 2.2e-36 155.6 104 71.2
BraA03t11578Z Brassica rapa HOM05D004651 ORTHO05D005761 2.2e-36 155.6 104 71.2
SHI26332 Sapria himalayana HOM05D004651 ORTHO05D005761 2.2e-36 155.6 99 73.7
BcaC02g12474 Brassica carinata HOM05D004651 ORTHO05D005761 2.9e-36 155.2 105 70.5
C04p03440 Brassica napus HOM05D004651 ORTHO05D005761 2.9e-36 155.2 105 70.5
BolC4t21980H Brassica oleracea HOM05D004651 ORTHO05D005761 2.9e-36 155.2 105 70.5
BraA05t19275Z Brassica rapa HOM05D004651 ORTHO05D005761 2.9e-36 155.2 101 70.3
Thhalv10017449m.g Eutrema salsugineum HOM05D004651 ORTHO05D005761 3.8e-36 154.8 104 68.3
Duzib128G1036 Durio zibethinus HOM05D004651 ORTHO05D005761 5.0e-36 154.5 98 75.5
PGR004G2434 Punica granatum HOM05D004651 ORTHO05D005761 5.0e-36 154.5 102 70.6
BcaB06g29236 Brassica carinata HOM05D004651 ORTHO05D005761 8.5e-36 153.7 104 67.3
BcaC02g07246 Brassica carinata HOM05D004651 ORTHO05D005761 8.5e-36 153.7 104 67.3
Carub.0004s2465 Capsella rubella HOM05D004651 ORTHO05D005761 1.1e-35 153.3 110 67.3
CAN.G358.117 Capsicum annuum HOM05D004651 ORTHO05D005761 1.1e-35 153.3 86 79.1
Medtr1g059290 Medicago truncatula HOM05D004651 ORTHO05D005761 1.1e-35 153.3 94 74.5
TWI60G1376 Tripterygium wilfordii HOM05D004651 ORTHO05D005761 1.1e-35 153.3 107 68.2
Aa31LG1G23980 Aethionema arabicum HOM05D004651 ORTHO05D005761 1.5e-35 152.9 104 69.2
AL4G40670 Arabidopsis lyrata HOM05D004651 ORTHO05D005761 1.9e-35 152.5 110 67.3
AT2G42310 Arabidopsis thaliana HOM05D004651 ORTHO05D005761 1.9e-35 152.5 110 67.3
BcaNung04397 Brassica carinata HOM05D004651 ORTHO05D005761 2.5e-35 152.1 107 65.4
CARHR137350 Cardamine hirsuta HOM05D004651 ORTHO05D005761 2.1e-34 149.1 107 64.5
Duzib093G1593 Durio zibethinus HOM05D004651 ORTHO05D005761 3.6e-34 148.3 102 70.6
TPR.G25632 Trifolium pratense HOM05D004651 ORTHO05D005761 8.0e-34 147.1 74 86.5
ATR0605G299 Amborella trichopoda HOM05D004651 ORTHO05D005761 1.8e-33 146.0 109 64.2
Os08g0505001 Oryza sativa ssp. japonica HOM05D004651 ORTHO05D005761 2.6e-32 142.1 90 68.9
ATR0605G353 Amborella trichopoda HOM05D004651 ORTHO05D005761 9.8e-32 140.2 109 62.4
Sp5g04900 Schrenkiella parvula HOM05D004651 ORTHO05D005761 1.3e-31 139.8 110 59.1
CSS0043471 Camellia sinensis var. sinensis HOM05D004651 ORTHO05D005761 1.4e-30 136.3 105 61.9
Prupe.5G050600 Prunus persica HOM05D004651 ORTHO05D005761 1.7e-28 129.4 81 70.4
SEGI_06557 Sequoiadendron giganteum HOM05D004651 ORTHO05D005761 4.3e-27 124.8 110 55.5
C03p28150 Brassica napus HOM05D004651 ORTHO05D005761 5.2e-25 117.9 64 85.9
Mapoly0006s0067 Marchantia polymorpha HOM05D004651 ORTHO05D005761 5.2e-25 117.9 98 56.1
Pp3c3_16790 Physcomitrium patens HOM05D004651 ORTHO05D005761 2.9e-23 112.1 101 55.4
AagrBONN_evm.TU.Sc2ySwM_362.1672 Anthoceros agrestis HOM05D004651 ORTHO05D005761 1.4e-22 109.8 85 58.8
RcHm_v2.0_Chr5g0057691 Rosa chinensis HOM05D004651 ORTHO05D005761 3.5e-21 105.1 55 85.5
Rhsim10G0114900 Rhododendron simsii HOM05D004651 ORTHO05D005761 7.8e-21 104.0 61 82.0
CBR_g8350 Chara braunii HOM05D004651 ORTHO05D005761 1.7e-20 102.8 96 54.2
MBI11_g15908_MAGBIO Magnolia biondii HOM05D004651 ORTHO05D005761 6.2e-18 94.4 69 62.3
Oeu038276.1 Olea europaea HOM05D004651 ORTHO05D005761 3.1e-17 92.0 59 72.9
SMO203G0043 Selaginella moellendorffii HOM05D004651 ORTHO05D005761 1.7e-15 86.3 73 50.7
BcaB06g26137 Brassica carinata HOM05D004651 ORTHO05D005761 1.9e-14 82.8 63 63.5
MCO03G385 Micromonas commoda HOM05D004651 ORTHO05D005761 1.9e-14 82.8 97 47.4
SGA_v2.0_scaffold18G08230 Striga asiatica HOM05D004651 ORTHO05D401477 2.6e-08 62.4 49 63.3
unitig_8.g3516 Utricularia gibba HOM05D004651 ORTHO05D005761 9.9e-08 60.5 49 51.0
TAR623G0451 Trochodendron aralioides HOM05D004651 ORTHO05D005761 7.1e-06 54.3 54 55.6


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