Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 1.0e-72 276.9 168 100.0
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 4.3e-60 235.0 169 83.4
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 7.4e-60 234.2 168 80.4
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 1.8e-58 229.6 167 79.0
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 2.9e-48 195.7 167 64.1
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 5.0e-48 194.9 172 62.2
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 2.1e-46 189.5 132 75.8
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 2.3e-45 186.0 168 73.8
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 2.6e-44 182.6 173 67.6
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 9.7e-44 180.6 174 61.5
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 9.7e-44 180.6 169 71.0
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 2.2e-43 179.5 169 59.8
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 2.8e-43 179.1 176 56.8
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 3.7e-43 178.7 181 60.8
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 6.3e-43 177.9 169 70.4
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 1.1e-42 177.2 177 59.3
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 1.8e-42 176.4 169 61.5
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 1.8e-42 176.4 175 58.3
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 2.4e-42 176.0 172 59.3
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 2.4e-42 176.0 172 58.1
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 7.0e-42 174.5 181 55.2
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 9.1e-42 174.1 171 61.4
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 1.2e-41 173.7 174 59.2
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 1.2e-41 173.7 171 60.2
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 3.5e-41 172.2 176 61.4
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 4.5e-41 171.8 170 57.6
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 5.9e-41 171.4 181 55.2
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 7.7e-41 171.0 168 60.1
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 7.7e-41 171.0 171 60.8
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 7.7e-41 171.0 176 64.8
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 1.0e-40 170.6 179 58.1
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 1.0e-40 170.6 171 69.0
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 1.0e-40 170.6 173 60.7
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 1.7e-40 169.9 171 63.7
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 2.2e-40 169.5 182 54.9
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 2.2e-40 169.5 180 59.4
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 2.2e-40 169.5 169 68.6
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 2.9e-40 169.1 169 68.0
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 2.9e-40 169.1 176 54.0
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 2.9e-40 169.1 183 55.7
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 3.8e-40 168.7 170 65.3
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 1.9e-39 166.4 171 56.1
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 2.5e-39 166.0 169 67.5
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 4.2e-39 165.2 179 68.2
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 4.2e-39 165.2 178 52.8
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 1.2e-38 163.7 127 69.3
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 2.1e-38 162.9 171 65.5
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 2.7e-38 162.5 180 58.3
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 2.7e-38 162.5 183 61.7
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 5.2e-37 158.3 171 66.7
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 8.8e-37 157.5 178 51.7
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 1.7e-35 153.3 186 51.6
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 1.1e-34 150.6 130 61.5
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 1.2e-33 147.1 125 65.6
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 5.9e-33 144.8 112 69.6
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 1.7e-32 143.3 129 64.3
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 3.8e-32 142.1 177 62.1
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 6.5e-32 141.4 172 61.6
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 8.5e-32 141.0 121 65.3
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 2.5e-31 139.4 181 51.4
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 3.2e-31 139.0 127 59.8
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 9.4e-31 137.5 180 50.0
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 9.4e-31 137.5 183 49.2
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 1.6e-30 136.7 179 49.2
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 3.6e-30 135.6 133 57.1
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 4.7e-30 135.2 167 55.7
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 1.4e-29 133.7 191 49.2
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 4.0e-29 132.1 125 56.0
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 1.5e-28 130.2 130 53.8
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 1.5e-28 130.2 177 48.6
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 2.6e-28 129.4 133 54.1
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 2.6e-28 129.4 133 54.1
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 2.6e-28 129.4 133 54.1
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 2.6e-28 129.4 179 49.7
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 4.4e-28 128.6 133 54.1
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 5.7e-28 128.3 130 53.1
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 5.7e-28 128.3 130 53.1
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 9.8e-28 127.5 130 52.3
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 9.8e-28 127.5 119 64.7
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 1.8e-26 123.2 131 51.1
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 1.8e-26 123.2 135 55.6
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 1.8e-26 123.2 131 52.7
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.8e-26 123.2 180 53.9
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 4.1e-26 122.1 131 51.9
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 4.1e-26 122.1 181 58.0
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 1.2e-25 120.6 174 51.1
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 1.6e-25 120.2 131 51.9
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 5.9e-25 118.2 124 58.1
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 2.2e-24 116.3 185 46.5
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 8.5e-24 114.4 145 52.4
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 1.5e-23 113.6 149 51.7
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.9e-23 113.2 181 48.1
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 2.0e-20 103.2 183 41.5
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 1.3e-19 100.5 141 46.8
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 1.3e-19 100.5 125 47.2
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 3.7e-19 99.0 182 48.4
arahy.Tifrunner.gnm1.ann1.90IGTQ Arachis hypogaea HOM05D007386 ORTHO05D009210 1.1e-18 97.4 109 58.7
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 3.5e-17 92.4 173 39.9
Os06g0630300 Oryza sativa ssp. japonica HOM05D007386 ORTHO05D009210 2.9e-16 89.4 180 38.3
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 5.0e-16 88.6 168 45.8
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 2.5e-15 86.3 173 38.7
Mapoly0035s0101 Marchantia polymorpha HOM05D007386 ORTHO05D009210 3.0e-13 79.3 147 38.8
PGSC0003DMG400019353 Solanum tuberosum HOM05D007386 ORTHO05D009210 5.2e-13 78.6 132 41.7
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.5e-12 77.0 132 43.9
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 2.6e-12 76.3 72 62.5
SEGI_27286 Sequoiadendron giganteum HOM05D007386 ORTHO05D009210 1.7e-11 73.6 69 55.1
arahy.Tifrunner.gnm1.ann1.92TB4L Arachis hypogaea HOM05D007386 ORTHO05D009210 1.1e-10 70.9 77 59.7
Cre17.g717700 Chlamydomonas reinhardtii HOM05D007386 ORTHO05D009210 6.6e-08 61.6 131 37.4


User provided reference genes

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