Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.04g149770 Amaranthus hybridus HOM05D025303 ORTHO05D015279 1.0e-170 603.2 288 100.0
Ah.04g149740 Amaranthus hybridus HOM05D025303 ORTHO05D015279 2.2e-64 250.0 243 51.4
Ah.04g149760 Amaranthus hybridus HOM05D025303 ORTHO05D015279 2.4e-58 229.9 305 44.9
Ah.02g131860 Amaranthus hybridus HOM05D029747 ORTHO05D015279 8.8e-53 211.5 261 42.1
AUR62039961 Chenopodium quinoa HOM05D025303 ORTHO05D015279 8.5e-48 194.9 288 39.6
AUR62007508 Chenopodium quinoa HOM05D025303 ORTHO05D015279 1.3e-40 171.0 279 40.5
Ah.02g131850 Amaranthus hybridus HOM05D029747 ORTHO05D015279 4.7e-30 136.0 155 43.2
Ah.02g131840 Amaranthus hybridus HOM05D029747 ORTHO05D015279 3.9e-24 116.3 118 46.6
AUR62018020 Chenopodium quinoa HOM05D025645 ORTHO05D015279 8.6e-16 88.6 270 30.7
Ah.02g131730 Amaranthus hybridus HOM05D029747 ORTHO05D015279 1.2e-14 84.7 85 48.2
BcaC04g19776 Brassica carinata HOM05D008086 ORTHO05D004972 2.1e-06 57.4 134 29.1
C09p51830 Brassica napus HOM05D008086 ORTHO05D004972 2.1e-06 57.4 134 29.1
A10p16630 Brassica napus HOM05D008086 ORTHO05D004972 4.7e-06 56.2 112 28.6
BcaC06g31340 Brassica carinata HOM05D008086 ORTHO05D004972 8.1e-06 55.5 131 27.5


User provided reference genes

Program Settings