Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.03g146560 Amaranthus hybridus HOM05D003913 ORTHO05D004803 1.1e-106 391.0 395 100.0
Dinv13071 Davidia involucrata HOM05D003913 ORTHO05D004803 2.6e-63 246.9 382 54.5
Dinv44716 Davidia involucrata HOM05D003913 ORTHO05D004803 1.9e-61 240.7 385 56.1
Actinidia29569 Actinidia chinensis HOM05D003913 ORTHO05D004803 2.1e-60 237.3 393 77.9
AUR62017935 Chenopodium quinoa HOM05D003913 ORTHO05D004803 4.6e-60 236.1 403 65.3
CsaV3_6G002750 Cucumis sativus L. HOM05D003913 ORTHO05D004803 3.9e-59 233.0 392 72.4
Sed0012824 Sechium edule HOM05D003913 ORTHO05D004803 6.6e-59 232.3 392 65.3
Lj2C196T3 Lonicera japonica HOM05D003913 ORTHO05D004803 8.6e-59 231.9 395 55.7
PGR031G2719 Punica granatum HOM05D003913 ORTHO05D004803 8.6e-59 231.9 385 74.3
ClCG08G002560 Citrullus lanatus HOM05D003913 ORTHO05D004803 3.3e-58 229.9 392 72.4
Atru.chr13.1880 Acer truncatum HOM05D003913 ORTHO05D004803 4.3e-58 229.6 385 78.2
CANSAT25G1043 Cannabis sativa HOM05D003913 ORTHO05D004803 9.5e-58 228.4 391 75.4
MELO3C024997.2 Cucumis melo HOM05D003913 ORTHO05D004803 2.8e-57 226.9 392 71.9
Manes.02G188000 Manihot esculenta HOM05D003913 ORTHO05D004803 8.9e-56 221.9 381 72.2
Prupe.8G049100 Prunus persica HOM05D003913 ORTHO05D004803 3.4e-55 219.9 387 72.1
Lj4A109T49 Lonicera japonica HOM05D003913 ORTHO05D004803 1.7e-54 217.6 383 77.0
Potri.019G087200 Populus trichocarpa HOM05D003913 ORTHO05D004803 3.8e-54 216.5 387 70.5
PGSC0003DMG400028735 Solanum tuberosum HOM05D003913 ORTHO05D004803 8.4e-54 215.3 386 74.6
AUR62003626 Chenopodium quinoa HOM05D003913 ORTHO05D004803 1.1e-53 214.9 394 71.3
Sed0004416 Sechium edule HOM05D003913 ORTHO05D004803 3.2e-53 213.4 394 71.3
EL10Ac6g15251 Beta vulgaris HOM05D003913 ORTHO05D004803 4.2e-53 213.0 393 71.8
Solyc07g008860.3 Solanum lycopersicum HOM05D003913 ORTHO05D004803 9.2e-53 211.8 386 74.9
Sabra13G0099000 Salix brachista HOM05D003913 ORTHO05D004803 1.2e-52 211.5 386 74.6
Ciclev10008663m.g Citrus clementina HOM05D003913 ORTHO05D004803 1.6e-52 211.1 380 72.6
Lalb_Chr20g0121511 Lupinus albus HOM05D003913 ORTHO05D004803 1.6e-52 211.1 385 44.7
FvH4_5g22350 Fragaria vesca HOM05D003913 ORTHO05D004803 3.5e-52 209.9 382 72.0
FAN18G2025 Fragaria x ananassa HOM05D003913 ORTHO05D004803 3.5e-52 209.9 382 72.0
FAN18G2798 Fragaria x ananassa HOM05D003913 ORTHO05D004803 3.5e-52 209.9 382 72.0
Sopen07g004790 Solanum pennellii HOM05D003913 ORTHO05D004803 3.5e-52 209.9 386 74.6
Aqoxy1G00206 Aquilegia oxysepala HOM05D003913 ORTHO05D004803 2.3e-51 207.2 391 66.2
FAN08G0696 Fragaria x ananassa HOM05D003913 ORTHO05D004803 3.0e-51 206.8 387 70.8
RcHm_v2.0_Chr7g0210071 Rosa chinensis HOM05D003913 ORTHO05D004803 3.0e-51 206.8 382 72.0
Hund19608 Selenicereus undatus HOM05D003913 ORTHO05D004803 3.9e-51 206.5 428 60.5
MD07G1041000 Malus domestica HOM05D003913 ORTHO05D004803 6.6e-51 205.7 382 71.7
TAR625G1217 Trochodendron aralioides HOM05D003913 ORTHO05D004803 1.9e-50 204.1 382 73.6
Lj5g0008809 Lotus japonicus HOM05D003913 ORTHO05D004803 4.3e-50 203.0 381 39.6
Potri.013G116900 Populus trichocarpa HOM05D003913 ORTHO05D004803 3.6e-49 199.9 392 61.0
Gorai.006G187200 Gossypium raimondii HOM05D003913 ORTHO05D004803 4.7e-49 199.5 387 43.4
arahy.Tifrunner.gnm1.ann1.0Z7T57 Arachis hypogaea HOM05D003913 ORTHO05D004803 6.2e-49 199.1 381 40.2
Thecc.08G198300 Theobroma cacao HOM05D003913 ORTHO05D004803 3.1e-48 196.8 387 47.5
PSO541G3150 Papaver somniferum HOM05D003913 ORTHO05D004803 4.0e-48 196.4 360 74.4
Gohir.D09G165400 Gossypium hirsutum HOM05D003913 ORTHO05D004803 5.3e-48 196.1 387 42.9
arahy.Tifrunner.gnm1.ann1.F1WV5B Arachis hypogaea HOM05D003913 ORTHO05D004803 1.2e-47 194.9 381 39.6
DCAR_000644 Daucus carota HOM05D003913 ORTHO05D004803 3.4e-47 193.4 384 48.2
FAN04G3257 Fragaria x ananassa HOM05D003913 ORTHO05D004803 5.8e-47 192.6 421 58.7
MD02G1272000 Malus domestica HOM05D003913 ORTHO05D004803 5.8e-47 192.6 382 71.2
CSS0047372 Camellia sinensis var. sinensis HOM05D003913 ORTHO05D004803 7.6e-47 192.2 388 68.8
ECA236G4407 Erigeron canadensis HOM05D003913 ORTHO05D004803 3.8e-46 189.9 387 40.8
SalBow7G2889 Salvia bowleyana HOM05D003913 ORTHO05D004803 6.4e-46 189.1 382 57.6
Nitab4.5_0002890g0020 Nicotiana tabacum HOM05D003913 ORTHO05D004803 1.9e-45 187.6 347 47.0
Lsat_1_v5_gn_9_43060 Lactuca sativa HOM05D003913 ORTHO05D004803 4.2e-45 186.4 383 67.6
BolC6t38638H Brassica oleracea HOM05D003913 ORTHO05D004803 7.1e-45 185.7 399 47.6
CARHR290910 Cardamine hirsuta HOM05D003913 ORTHO05D004803 7.1e-45 185.7 387 58.7
Oeu053831.1 Olea europaea HOM05D003913 ORTHO05D004803 7.1e-45 185.7 388 60.6
TWI12G0147 Tripterygium wilfordii HOM05D003913 ORTHO05D004803 9.3e-45 185.3 389 68.6
CiPaw.15G007000 Carya illinoinensis HOM05D003913 ORTHO05D004803 1.6e-44 184.5 387 62.3
Nitab4.5_0000366g0190 Nicotiana tabacum HOM05D003913 ORTHO05D004803 1.0e-43 181.8 386 66.6
BraA07t30691Z Brassica rapa HOM05D003913 ORTHO05D004803 2.3e-43 180.6 399 54.6
C06p35320 Brassica napus HOM05D003913 ORTHO05D004803 6.6e-43 179.1 413 49.9
ECA232G2276 Erigeron canadensis HOM05D003913 ORTHO05D004803 6.6e-43 179.1 389 65.0
PSO675G8150 Papaver somniferum HOM05D003913 ORTHO05D004803 1.1e-42 178.3 389 69.4
A07p30560 Brassica napus HOM05D003913 ORTHO05D004803 2.5e-42 177.2 413 41.6
A07p37990 Brassica napus HOM05D003913 ORTHO05D004803 2.5e-42 177.2 398 54.0
GSVIVG01001592001 Vitis vinifera HOM05D003913 ORTHO05D004803 2.5e-42 177.2 391 70.3
C06p45910 Brassica napus HOM05D003913 ORTHO05D004803 3.3e-42 176.8 385 57.9
BolC6t39643H Brassica oleracea HOM05D003913 ORTHO05D004803 4.3e-42 176.4 391 57.5
DCAR_004603 Daucus carota HOM05D000366 ORTHO05D000437 5.6e-42 176.0 107 75.7
BcaB03g15621 Brassica carinata HOM05D003913 ORTHO05D004803 7.3e-42 175.6 398 56.8
Nn3g16733 Nelumbo nucifera HOM05D003913 ORTHO05D004803 7.3e-42 175.6 382 65.4
TWI75G1061 Tripterygium wilfordii HOM05D003913 ORTHO05D004803 7.3e-42 175.6 382 68.8
Actinidia33168 Actinidia chinensis HOM05D003898 ORTHO05D004642 9.6e-42 175.3 275 45.5
RcHm_v2.0_Chr6g0272901 Rosa chinensis HOM05D003913 ORTHO05D004803 1.6e-41 174.5 386 68.1
BcaC08g46615 Brassica carinata HOM05D003913 ORTHO05D004803 2.1e-41 174.1 389 57.1
Glyma.20G173100 Glycine max HOM05D003913 ORTHO05D004803 4.8e-41 172.9 379 47.0
MSTRG.9615 Avicennia marina HOM05D003913 ORTHO05D004803 8.1e-41 172.2 387 61.8
GSVIVG01015205001 Vitis vinifera HOM05D003913 ORTHO05D004803 8.1e-41 172.2 397 49.9
AL2G31420 Arabidopsis lyrata HOM05D003913 ORTHO05D004803 1.1e-40 171.8 395 56.5
Cc11_g02860 Coffea canephora HOM05D003913 ORTHO05D004803 1.1e-40 171.8 388 61.1
Rhsim04G0038100 Rhododendron simsii HOM05D003913 ORTHO05D004803 1.4e-40 171.4 418 63.6
Gorai.010G129100 Gossypium raimondii HOM05D003913 ORTHO05D004803 1.8e-40 171.0 387 40.3
Gohir.A06G109200 Gossypium hirsutum HOM05D003913 ORTHO05D004803 2.4e-40 170.6 361 41.0
VMungo1080G1176 Vigna mungo HOM05D003913 ORTHO05D004803 4.0e-40 169.9 377 50.1
Gohir.D06G113300 Gossypium hirsutum HOM05D003913 ORTHO05D004803 6.9e-40 169.1 387 40.1
Phvul.011G104600 Phaseolus vulgaris HOM05D003913 ORTHO05D004803 6.9e-40 169.1 377 53.6
LjContig00222g0022410 Lotus japonicus HOM05D003913 ORTHO05D004803 1.2e-39 168.3 386 35.8
BraA07t31364Z Brassica rapa HOM05D003913 ORTHO05D004803 4.5e-39 166.4 388 56.7
FvH4_2g12470 Fragaria vesca HOM05D003913 ORTHO05D004803 1.7e-38 164.5 386 67.1
CDE08G0059 Ceratophyllum demersum HOM05D003913 ORTHO05D004803 2.9e-38 163.7 382 56.3
Sabra19G0097800 Salix brachista HOM05D003913 ORTHO05D004803 2.9e-38 163.7 395 70.6
HanXRQChr11g0320411 Helianthus annuus HOM05D003913 ORTHO05D004803 3.8e-38 163.3 384 65.6
FAN24G0738 Fragaria x ananassa HOM05D003913 ORTHO05D004803 1.9e-37 161.0 386 66.8
Sabra19G0101300 Salix brachista HOM05D003913 ORTHO05D004803 4.2e-37 159.8 395 68.9
Gohir.A09G169700 Gossypium hirsutum HOM05D003913 ORTHO05D004803 5.4e-37 159.5 387 39.0
Hma1.2p1_0276F.1_g111300 Hydrangea macrophylla HOM05D003913 ORTHO05D004803 7.1e-37 159.1 104 72.1
MBI10_g41322_MAGBIO Magnolia biondii HOM05D003913 ORTHO05D004803 9.3e-37 158.7 107 71.0
MBI10_g42737_MAGBIO Magnolia biondii HOM05D003913 ORTHO05D004803 9.3e-37 158.7 344 72.7
Thhalv10018505m.g Eutrema salsugineum HOM05D003913 ORTHO05D004803 1.2e-36 158.3 386 57.0
Sp5g26870 Schrenkiella parvula HOM05D003913 ORTHO05D004803 1.2e-36 158.3 387 55.8
SpUn0020_0100 Schrenkiella parvula HOM05D003913 ORTHO05D004803 1.2e-36 158.3 387 55.8
Oeu053830.1 Olea europaea HOM05D003913 ORTHO05D004803 3.5e-36 156.8 391 57.0
Aa31LG7G6630 Aethionema arabicum HOM05D003913 ORTHO05D004803 4.6e-36 156.4 397 30.2
TAR381G0993 Trochodendron aralioides HOM05D003913 ORTHO05D004803 1.0e-35 155.2 103 70.9
QL02p034830 Quercus lobata HOM05D003913 ORTHO05D004803 1.3e-35 154.8 100 75.0
Sc16g0003970 Simmondsia chinensis HOM05D003913 ORTHO05D004803 1.8e-35 154.5 338 70.4
Aa31LG4G8790 Aethionema arabicum HOM05D003913 ORTHO05D004803 2.3e-35 154.1 409 53.3
BcaC08g45753 Brassica carinata HOM05D003913 ORTHO05D004803 2.3e-35 154.1 389 55.8
CANSAT11G1897 Cannabis sativa HOM05D003913 ORTHO05D004803 2.3e-35 154.1 102 69.6
Cpa.g.sc2399.1 Carica papaya HOM05D003913 ORTHO05D004803 2.3e-35 154.1 112 65.2
Medtr1g097140 Medicago truncatula HOM05D003913 ORTHO05D004803 2.3e-35 154.1 381 30.7
Psat6g019720 Pisum sativum HOM05D003913 ORTHO05D004803 3.0e-35 153.7 263 35.4
Psat6g188560 Pisum sativum HOM05D000168 ORTHO05D004803 3.0e-35 153.7 370 29.7
AT1G71840 Arabidopsis thaliana HOM05D003913 ORTHO05D004803 1.1e-34 151.8 117 62.4
Carub.0002s1860 Capsella rubella HOM05D003913 ORTHO05D004803 1.5e-34 151.4 117 62.4
COL.COLO4_03395 Corchorus olitorius HOM05D003913 ORTHO05D004803 4.3e-34 149.8 107 69.2
SGA_v2.0_scaffold114G31919 Striga asiatica HOM05D003913 ORTHO05D004803 7.4e-34 149.1 342 62.9
THA.LOC104826775 Tarenaya hassleriana HOM05D003913 ORTHO05D004803 7.4e-34 149.1 385 56.1
Eucgr.E02330 Eucalyptus grandis HOM05D003913 ORTHO05D004803 2.8e-33 147.1 107 64.5
Duzib211G0424 Durio zibethinus HOM05D003913 ORTHO05D004803 4.8e-33 146.4 389 40.6
Ca_30575_v3 Cicer arietinum L. HOM05D003913 ORTHO05D004803 6.2e-33 146.0 376 29.8
Peaxi162Scf01838g00003 Petunia axillaris HOM05D000173 ORTHO05D000316 8.1e-33 145.6 268 35.4
vmacro21210 Vaccinium macrocarpon HOM05D003913 ORTHO05D004803 1.8e-32 144.4 418 58.4
arahy.Tifrunner.gnm1.ann1.A7TGXU Arachis hypogaea HOM05D003913 ORTHO05D004803 3.1e-32 143.7 416 32.2
FAN20G2057 Fragaria x ananassa HOM05D003913 ORTHO05D004803 9.0e-32 142.1 111 60.4
COL.COLO4_13734 Corchorus olitorius HOM05D003913 ORTHO05D004803 2.0e-31 141.0 334 43.7
HPP92_008098 Vanilla planifolia HOM05D003913 ORTHO05D004803 4.5e-31 139.8 387 58.4
Pp3c14_20020 Physcomitrium patens HOM05D003913 ORTHO05D004803 9.9e-31 138.7 399 59.9
Migut.J01123 Erythranthe guttata HOM05D003913 ORTHO05D004803 2.2e-30 137.5 117 59.8
Os03g0685600 Oryza sativa ssp. japonica HOM05D003913 ORTHO05D004803 4.9e-30 136.3 376 52.9
Zm00001eb362180 Zea mays HOM05D003913 ORTHO05D004803 1.4e-29 134.8 393 47.1
Mapoly0155s0005 Marchantia polymorpha HOM05D003913 ORTHO05D004803 3.2e-29 133.7 398 34.7
Cfa018220 Carpinus fangiana HOM05D003913 ORTHO05D004803 4.2e-29 133.3 345 66.1
SEGI_39165 Sequoiadendron giganteum HOM05D003913 ORTHO05D004803 9.3e-29 132.1 118 56.8
Nitab4.5_0002890g0010 Nicotiana tabacum HOM05D003913 ORTHO05D004803 1.2e-28 131.7 329 37.4
VMungo0720G0336 Vigna mungo HOM05D003913 ORTHO05D004803 2.1e-28 131.0 101 62.4
Glyma.10G218600 Glycine max HOM05D003913 ORTHO05D004803 7.9e-28 129.0 107 58.9
Hma1.2p1_0276F.1_g111310 Hydrangea macrophylla HOM05D003913 ORTHO05D004803 1.0e-27 128.6 116 57.8
EL10Ac5g10958 Beta vulgaris HOM05D003913 ORTHO05D004803 3.0e-27 127.1 385 27.0
Rhsim06G0087400 Rhododendron simsii HOM05D003913 ORTHO05D004803 6.7e-27 125.9 478 53.8
Haze_17883 Corylus avellana HOM05D003913 ORTHO05D004803 8.7e-27 125.6 104 61.5
Zm00001eb139680 Zea mays HOM05D003913 ORTHO05D004803 8.7e-27 125.6 392 55.6
ATR0001G003 Amborella trichopoda HOM05D003913 ORTHO05D004803 1.1e-26 125.2 343 37.0
Migut.I00088 Erythranthe guttata HOM05D003913 ORTHO05D004803 3.3e-26 123.6 413 39.2
unitig_747.g21315 Utricularia gibba HOM05D003913 ORTHO05D004803 1.3e-25 121.7 103 61.2
AagrBONN_evm.TU.Sc2ySwM_368.376 Anthoceros agrestis HOM05D003913 ORTHO05D004803 5.3e-24 116.3 409 51.8
TPR.G30584 Trifolium pratense HOM05D003913 ORTHO05D004803 5.3e-24 116.3 107 56.1
Migut.D01748 Erythranthe guttata HOM05D003913 ORTHO05D004803 9.0e-24 115.5 63 79.4
SMO347G0114 Selaginella moellendorffii HOM05D003913 ORTHO05D004803 1.9e-21 107.8 129 46.5
AUR62024845 Chenopodium quinoa HOM05D003913 ORTHO05D004803 2.5e-21 107.5 390 25.4
PSO455G0073 Papaver somniferum HOM05D003913 ORTHO05D004803 2.5e-21 107.5 62 79.0
CARHR124080 Cardamine hirsuta HOM05D003913 ORTHO05D004803 3.5e-20 103.6 115 50.4
Lj4C56G20 Lonicera japonica HOM05D003913 ORTHO05D004803 3.5e-20 103.6 211 31.8
AUR62001664 Chenopodium quinoa HOM05D003913 ORTHO05D004803 3.3e-18 97.1 345 25.2
Thecc.09G236800 Theobroma cacao HOM05D003913 ORTHO05D004803 2.8e-17 94.0 375 25.1
Glyma.09G057500 Glycine max HOM05D003913 ORTHO05D004803 3.1e-16 90.5 161 34.2
SHI13909 Sapria himalayana HOM05D003913 ORTHO05D004803 1.2e-15 88.6 94 50.0
EL10Ac9g21859 Beta vulgaris HOM05D003913 ORTHO05D004803 1.0e-14 85.5 56 66.1
BraA02t06789Z Brassica rapa HOM05D003913 ORTHO05D004803 1.7e-14 84.7 54 68.5
Medtr7g079470 Medicago truncatula HOM05D003913 ORTHO05D004803 2.9e-14 84.0 64 60.9
A02p17440 Brassica napus HOM05D003913 ORTHO05D004803 6.5e-14 82.8 54 66.7
SMO367G0065 Selaginella moellendorffii HOM05D003913 ORTHO05D004803 6.1e-12 76.3 365 23.8
Cre12.g487200 Chlamydomonas reinhardtii HOM05D003913 ORTHO05D004803 7.9e-12 75.9 350 25.1
Glyma.17G173200 Glycine max HOM05D003913 ORTHO05D004803 6.7e-11 72.8 41 70.7
SMO343G0013 Selaginella moellendorffii HOM05D003913 ORTHO05D004803 4.5e-07 60.1 379 22.2
CBR_g49506 Chara braunii HOM05D003913 ORTHO05D004803 3.8e-06 57.0 98 32.7


User provided reference genes

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