Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 0.0e+00 1122.5 599 100.0
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 4.1e-238 828.2 583 79.4
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 6.0e-221 771.2 583 75.3
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 1.0e-196 690.6 472 76.9
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 3.1e-193 679.1 467 76.4
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 1.8e-188 663.3 583 63.8
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 2.8e-186 656.0 590 63.2
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 1.4e-185 653.7 586 61.6
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 6.9e-185 651.4 600 62.7
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 2.0e-184 649.8 588 61.6
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 2.6e-184 649.4 598 62.2
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 6.5e-183 644.8 599 61.4
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 1.1e-182 644.0 595 62.7
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 5.5e-182 641.7 602 61.5
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 3.6e-181 639.0 597 59.0
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 6.7e-180 634.8 599 61.3
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 3.3e-179 632.5 584 59.9
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 1.7e-178 630.2 589 62.3
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 6.3e-178 628.2 598 59.0
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 3.1e-177 625.9 595 59.8
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 2.0e-176 623.2 598 58.4
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 2.0e-176 623.2 601 62.7
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 7.7e-176 621.3 597 58.1
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 1.0e-175 620.9 603 60.9
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 1.3e-175 620.5 598 58.4
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 2.9e-175 619.4 618 59.1
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 3.8e-175 619.0 626 58.0
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 6.5e-175 618.2 598 58.9
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 1.1e-174 617.5 590 57.6
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 1.4e-174 617.1 592 57.9
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 1.4e-174 617.1 598 59.9
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 3.2e-174 615.9 603 56.4
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 5.5e-174 615.1 596 59.9
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 5.5e-174 615.1 597 61.1
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 9.4e-174 614.4 598 57.9
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 1.2e-173 614.0 603 60.2
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 1.6e-173 613.6 602 60.6
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 2.1e-173 613.2 592 57.3
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 3.6e-173 612.5 596 59.6
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 6.1e-173 611.7 602 60.0
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.0e-172 610.9 596 59.7
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 1.4e-172 610.5 596 59.7
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 3.0e-172 609.4 596 59.6
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 3.9e-172 609.0 596 59.7
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 3.9e-172 609.0 607 57.7
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 5.1e-172 608.6 595 58.7
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 8.8e-172 607.8 592 59.5
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 2.6e-171 606.3 599 61.1
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 4.4e-171 605.5 590 60.0
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 4.4e-171 605.5 583 57.5
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.2e-170 603.2 581 58.3
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 2.8e-170 602.8 583 58.3
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 4.8e-170 602.1 590 60.3
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 1.8e-169 600.1 595 58.3
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 7.0e-169 598.2 612 56.0
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.0e-168 596.7 583 58.0
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 2.0e-168 596.7 585 58.6
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 2.6e-168 596.3 592 58.6
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 2.6e-168 596.3 602 56.0
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 3.5e-168 595.9 598 59.5
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 5.9e-168 595.1 600 55.5
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 7.7e-168 594.7 585 57.9
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 1.7e-167 593.6 593 58.2
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 5.0e-167 592.0 596 58.6
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 2.5e-166 589.7 600 59.7
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 4.2e-166 589.0 693 52.1
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 5.5e-166 588.6 598 57.4
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 9.4e-166 587.8 593 58.0
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 1.2e-165 587.4 594 57.9
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 4.7e-165 585.5 584 57.4
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 3.9e-164 582.4 581 56.1
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 8.8e-164 581.3 581 59.9
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 8.8e-164 581.3 593 55.8
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 4.4e-163 578.9 582 56.0
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.8e-162 576.2 595 58.0
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 2.8e-162 576.2 576 58.9
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 1.1e-161 574.3 632 54.4
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 1.8e-161 573.5 579 58.2
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 4.1e-161 572.4 609 55.3
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 9.1e-161 571.2 576 58.0
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 2.2e-159 566.6 583 57.8
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 5.5e-158 562.0 595 57.1
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 6.1e-157 558.5 612 53.3
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 1.0e-156 557.8 594 54.2
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 1.0e-156 557.8 612 53.3
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 5.2e-156 555.4 587 54.7
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 5.2e-156 555.4 582 55.0
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 1.2e-155 554.3 583 55.2
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 2.0e-155 553.5 595 55.8
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 1.3e-154 550.8 587 54.2
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 1.3e-154 550.8 578 57.4
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 2.8e-154 549.7 584 55.1
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 2.7e-152 543.1 598 53.8
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 2.9e-151 539.7 611 52.2
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 1.0e-148 531.2 600 55.0
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 6.6e-143 511.9 600 53.0
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 2.8e-141 506.5 612 51.0
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 3.4e-139 499.6 594 52.4
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 3.7e-138 496.1 514 57.0
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 4.6e-128 462.6 456 56.1
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 6.0e-120 435.6 431 57.3
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 3.0e-119 433.3 436 55.7
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 4.7e-117 426.0 426 59.2
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 8.9e-116 421.8 427 55.0
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 3.5e-104 383.3 593 42.5
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 2.1e-101 374.0 644 38.7
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 5.4e-97 359.4 288 64.6
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 1.2e-91 341.7 671 37.6
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 5.8e-91 339.3 315 61.0
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 4.8e-85 319.7 581 37.5
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 7.9e-72 275.8 423 41.8
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 1.9e-57 228.0 307 45.6
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 1.8e-55 221.5 193 62.2
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 4.4e-46 190.3 287 42.5
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 3.5e-43 180.6 171 66.7
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 2.9e-42 177.6 154 59.7
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 1.1e-33 149.1 309 36.9
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 1.0e-31 142.5 145 66.9
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 6.8e-31 139.8 144 64.6
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 1.5e-30 138.7 97 72.2
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 7.0e-28 129.8 144 58.3
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 2.7e-27 127.9 291 34.7
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 4.7e-24 117.1 153 47.1
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 8.0e-24 116.3 106 59.4
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 2.0e-19 101.7 119 48.7
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 1.9e-12 78.6 128 36.7
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 4.6e-11 73.9 144 37.5


User provided reference genes

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