Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.03g142930 Amaranthus hybridus HOM05D007812 ORTHO05D009912 6.0e-34 147.1 85 100.0
Manes.11G025800 Manihot esculenta HOM05D007812 ORTHO05D009912 3.9e-09 64.7 63 65.1
MBI01_g09945_MAGBIO Magnolia biondii HOM05D007812 ORTHO05D009912 1.5e-08 62.8 54 70.4
Cpa.g.sc25.43 Carica papaya HOM05D007812 ORTHO05D009912 1.9e-08 62.4 65 64.6
Cfa003579 Carpinus fangiana HOM05D007812 ORTHO05D009912 1.9e-08 62.4 60 61.7
CiPaw.02G139600 Carya illinoinensis HOM05D007812 ORTHO05D009912 3.3e-08 61.6 60 61.7
Potri.001G196150 Populus trichocarpa HOM05D007812 ORTHO05D009912 3.3e-08 61.6 63 61.9
Hma1.2p1_0496F.1_g165840 Hydrangea macrophylla HOM05D007812 ORTHO05D009912 4.3e-08 61.2 65 56.9
Sabra03G0024000 Salix brachista HOM05D007812 ORTHO05D009912 4.3e-08 61.2 63 61.9
Sp3g12050 Schrenkiella parvula HOM05D007812 ORTHO05D009912 7.4e-08 60.5 55 69.1
BcaB06g25431 Brassica carinata HOM05D007812 ORTHO05D009912 9.7e-08 60.1 68 60.3
A05p35560 Brassica napus HOM05D007812 ORTHO05D009912 9.7e-08 60.1 68 60.3
C05p53950 Brassica napus HOM05D007812 ORTHO05D009912 9.7e-08 60.1 68 60.3
BolC5t34061H Brassica oleracea HOM05D007812 ORTHO05D009912 9.7e-08 60.1 68 60.3
BraA05t22365Z Brassica rapa HOM05D007812 ORTHO05D009912 9.7e-08 60.1 68 60.3
Thhalv10021887m.g Eutrema salsugineum HOM05D007812 ORTHO05D009912 2.2e-07 58.9 55 67.3
CARHR088620 Cardamine hirsuta HOM05D007812 ORTHO05D009912 2.8e-07 58.5 68 58.8
PGR102G2903 Punica granatum HOM05D007812 ORTHO05D009912 3.7e-07 58.2 55 63.6
Atru.chr1.3756 Acer truncatum HOM05D007812 ORTHO05D009912 4.8e-07 57.8 54 74.1
CDE06G1846 Ceratophyllum demersum HOM05D007812 ORTHO05D009912 4.8e-07 57.8 54 63.0
CSS0045617 Camellia sinensis var. sinensis HOM05D007812 ORTHO05D009912 6.3e-07 57.4 53 64.2
Zm00001eb270650 Zea mays HOM05D007812 ORTHO05D009912 6.3e-07 57.4 64 54.7
Ah.08g216270 Amaranthus hybridus HOM05D007812 ORTHO05D009912 8.2e-07 57.0 68 58.8
TPR.G19291 Trifolium pratense HOM05D007812 ORTHO05D009912 8.2e-07 57.0 66 56.1
Aa31LG10G880 Aethionema arabicum HOM05D007812 ORTHO05D009912 1.4e-06 56.2 51 68.6
Carub.0003s1338 Capsella rubella HOM05D007812 ORTHO05D009912 1.8e-06 55.8 55 63.6
PSO210G6368 Papaver somniferum HOM05D007812 ORTHO05D009912 1.8e-06 55.8 60 63.3
Lj3g0001021 Lotus japonicus HOM05D007812 ORTHO05D009912 2.4e-06 55.5 66 59.1
TWI31G1317 Tripterygium wilfordii HOM05D007812 ORTHO05D009912 2.4e-06 55.5 61 62.3
Potri.003G037100 Populus trichocarpa HOM05D007812 ORTHO05D009912 3.1e-06 55.1 65 53.8
QL05p012120 Quercus lobata HOM05D007812 ORTHO05D009912 3.1e-06 55.1 42 76.2
Hund18713 Selenicereus undatus HOM05D007812 ORTHO05D009912 3.1e-06 55.1 68 54.4
Phvul.010G138300 Phaseolus vulgaris HOM05D007812 ORTHO05D009912 4.1e-06 54.7 66 54.5
ECA247G3511 Erigeron canadensis HOM05D007812 ORTHO05D009912 5.3e-06 54.3 50 66.0
FAN09G2870 Fragaria x ananassa HOM05D007812 ORTHO05D009912 6.9e-06 53.9 42 73.8
RcHm_v2.0_Chr2g0143441 Rosa chinensis HOM05D007812 ORTHO05D009912 6.9e-06 53.9 43 74.4
Haze_15960 Corylus avellana HOM05D007812 ORTHO05D009912 9.1e-06 53.5 60 53.3
Medtr8g017190 Medicago truncatula HOM05D007812 ORTHO05D009912 9.1e-06 53.5 66 56.1


User provided reference genes

Program Settings