Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 2.5e-60 235.7 167 100.0
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 3.3e-28 129.0 166 65.1
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 1.2e-22 110.5 129 79.1
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 7.4e-20 101.3 129 67.4
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 1.7e-19 100.1 130 73.8
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 2.2e-19 99.8 128 71.1
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 2.2e-19 99.8 157 65.6
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 1.1e-18 97.4 140 74.3
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 1.4e-18 97.1 132 65.9
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 4.1e-18 95.5 172 62.2
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 2.0e-17 93.2 132 58.3
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 2.0e-17 93.2 167 56.3
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 4.5e-17 92.0 165 64.2
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 4.5e-17 92.0 128 71.9
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 5.9e-17 91.7 167 56.3
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 7.7e-17 91.3 161 61.5
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 7.7e-17 91.3 167 58.7
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 1.0e-16 90.9 136 64.0
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 1.0e-16 90.9 132 64.4
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 2.2e-16 89.7 167 59.3
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 2.9e-16 89.4 153 61.4
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 2.9e-16 89.4 153 61.4
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 2.9e-16 89.4 172 59.3
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 3.8e-16 89.0 151 54.3
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 5.0e-16 88.6 159 62.3
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 5.0e-16 88.6 129 72.9
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 6.5e-16 88.2 125 60.8
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 6.5e-16 88.2 129 70.5
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 8.5e-16 87.8 173 60.7
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 1.9e-15 86.7 128 59.4
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 2.5e-15 86.3 128 65.6
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 3.2e-15 85.9 150 57.3
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 4.2e-15 85.5 162 58.6
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 4.2e-15 85.5 146 59.6
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 5.5e-15 85.1 159 55.3
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 5.5e-15 85.1 128 60.9
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 5.5e-15 85.1 164 56.1
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 7.2e-15 84.7 153 54.9
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 7.2e-15 84.7 162 55.6
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 9.4e-15 84.3 167 57.5
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 1.2e-14 84.0 175 57.1
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 1.2e-14 84.0 149 64.4
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 1.2e-14 84.0 132 64.4
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 1.2e-14 84.0 129 68.2
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 1.6e-14 83.6 162 54.9
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 1.6e-14 83.6 167 52.1
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 2.1e-14 83.2 148 60.8
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 2.1e-14 83.2 176 58.5
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 2.7e-14 82.8 158 58.9
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 3.6e-14 82.4 158 58.9
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 4.7e-14 82.0 160 59.4
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 8.0e-14 81.3 150 64.0
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 8.0e-14 81.3 148 62.2
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 1.0e-13 80.9 164 52.4
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 1.0e-13 80.9 128 65.6
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 1.4e-13 80.5 168 60.1
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 1.8e-13 80.1 132 59.1
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 2.3e-13 79.7 175 54.3
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 2.3e-13 79.7 175 54.3
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 2.3e-13 79.7 139 69.8
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 3.0e-13 79.3 138 58.7
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 3.0e-13 79.3 163 55.2
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 6.7e-13 78.2 123 52.8
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 6.7e-13 78.2 128 70.3
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 8.8e-13 77.8 151 53.6
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 8.8e-13 77.8 149 63.8
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 8.8e-13 77.8 159 56.6
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 1.2e-12 77.4 170 49.4
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 1.5e-12 77.0 160 52.5
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 1.5e-12 77.0 138 59.4
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 1.5e-12 77.0 138 59.4
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 2.0e-12 76.6 148 59.5
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 2.0e-12 76.6 130 68.5
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 2.6e-12 76.3 140 59.3
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 4.4e-12 75.5 164 56.7
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 4.4e-12 75.5 140 59.3
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 4.4e-12 75.5 126 43.7
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 4.4e-12 75.5 159 59.1
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 4.4e-12 75.5 135 58.5
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 5.7e-12 75.1 165 49.7
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 5.7e-12 75.1 140 59.3
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 7.5e-12 74.7 128 69.5
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 1.7e-11 73.6 144 55.6
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 1.1e-10 70.9 146 38.4
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 1.8e-10 70.1 119 58.8
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 2.4e-10 69.7 151 58.9
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 3.1e-10 69.3 164 57.3
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 1.2e-09 67.4 166 51.2
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 1.2e-09 67.4 129 44.2
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 1.6e-09 67.0 144 50.0
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 2.7e-09 66.2 171 52.6
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.0e-08 64.3 102 64.7
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 1.0e-08 64.3 171 45.6
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 1.9e-07 60.1 162 50.6
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 2.5e-07 59.7 117 58.1
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 3.2e-07 59.3 150 51.3
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 5.5e-07 58.5 91 48.4
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 1.2e-06 57.4 143 44.1
Peaxi162Scf00150g00132 Petunia axillaris HOM05D007578 ORTHO05D009497 1.6e-06 57.0 105 61.9


User provided reference genes

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