Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.03g142080 Amaranthus hybridus HOM05D005860 ORTHO05D006977 1.3e-195 686.8 511 100.0
EL10Ac1g02122 Beta vulgaris HOM05D005860 ORTHO05D006977 4.0e-133 479.2 547 73.1
AUR62032474 Chenopodium quinoa HOM05D005860 ORTHO05D006977 3.8e-123 446.0 437 84.4
AUR62043070 Chenopodium quinoa HOM05D005860 ORTHO05D006977 3.8e-123 446.0 437 85.4
Sc16g0003100 Simmondsia chinensis HOM05D005860 ORTHO05D006977 1.8e-112 410.6 470 74.5
Hund24045 Selenicereus undatus HOM05D005860 ORTHO05D006977 2.5e-103 380.2 439 75.9
Eucgr.J02311 Eucalyptus grandis HOM05D005860 ORTHO05D006977 4.3e-95 352.8 480 59.8
SalBow1G3206 Salvia bowleyana HOM05D005860 ORTHO05D006977 1.7e-94 350.9 463 71.7
SalBow7G2829 Salvia bowleyana HOM05D005860 ORTHO05D006977 1.7e-94 350.9 463 71.7
Cpa.g.sc171.37 Carica papaya HOM05D005860 ORTHO05D006977 3.1e-93 346.7 429 72.7
PGR083G1804 Punica granatum HOM05D005860 ORTHO05D006977 3.1e-93 346.7 444 55.2
TAR622G0256 Trochodendron aralioides HOM05D005860 ORTHO05D006977 4.5e-92 342.8 473 61.5
CiPaw.04G034700 Carya illinoinensis HOM05D005860 ORTHO05D006977 7.7e-92 342.0 443 61.2
Oeu058768.1 Olea europaea HOM05D005860 ORTHO05D006977 1.3e-91 341.3 434 68.2
GSVIVG01001819001 Vitis vinifera HOM05D005860 ORTHO05D006977 2.9e-91 340.1 435 70.3
CSS0028115 Camellia sinensis var. sinensis HOM05D005860 ORTHO05D006977 5.0e-91 339.3 445 71.2
CSS0015596 Camellia sinensis var. sinensis HOM05D005860 ORTHO05D006977 6.5e-91 339.0 445 71.2
Lj7A609T51 Lonicera japonica HOM05D005860 ORTHO05D006977 8.5e-91 338.6 434 68.4
DCAR_021767 Daucus carota HOM05D005860 ORTHO05D006977 1.1e-90 338.2 434 73.5
Atru.chr4.382 Acer truncatum HOM05D005860 ORTHO05D006977 1.4e-90 337.8 430 69.1
QL02p072028 Quercus lobata HOM05D005860 ORTHO05D006977 1.4e-90 337.8 485 60.4
Migut.K01447 Erythranthe guttata HOM05D005860 ORTHO05D006977 4.2e-90 336.3 445 66.1
Potri.017G067600 Populus trichocarpa HOM05D005860 ORTHO05D006977 4.2e-90 336.3 429 69.7
MSTRG.15567 Avicennia marina HOM05D005860 ORTHO05D006977 7.2e-90 335.5 440 71.1
Cc02_g00900 Coffea canephora HOM05D005860 ORTHO05D006977 2.7e-89 333.6 445 64.7
Gohir.A10G079300 Gossypium hirsutum HOM05D005860 ORTHO05D006977 3.6e-89 333.2 452 65.3
Duzib116G0811 Durio zibethinus HOM05D005860 ORTHO05D006977 4.7e-89 332.8 443 66.8
COL.COLO4_03595 Corchorus olitorius HOM05D005860 ORTHO05D006977 1.4e-88 331.3 445 71.2
Sabra17G0063700 Salix brachista HOM05D005860 ORTHO05D006977 3.0e-88 330.1 429 67.6
Actinidia30891 Actinidia chinensis HOM05D005860 ORTHO05D006977 6.7e-88 328.9 446 72.0
Manes.15G158200 Manihot esculenta HOM05D005860 ORTHO05D006977 2.0e-87 327.4 443 70.2
Gorai.011G077700 Gossypium raimondii HOM05D005860 ORTHO05D006977 3.3e-87 326.6 449 65.0
Lj2g0013553 Lotus japonicus HOM05D005860 ORTHO05D006977 5.7e-87 325.9 472 67.2
Dinv19535 Davidia involucrata HOM05D005860 ORTHO05D006977 9.7e-87 325.1 433 65.6
Hma1.2p1_1219F.1_g267900 Hydrangea macrophylla HOM05D005860 ORTHO05D006977 2.8e-86 323.6 456 64.7
arahy.Tifrunner.gnm1.ann1.SB3XQV Arachis hypogaea HOM05D005860 ORTHO05D006977 6.3e-86 322.4 471 65.8
arahy.Tifrunner.gnm1.ann1.WZ54PF Arachis hypogaea HOM05D005860 ORTHO05D006977 6.9e-85 318.9 469 65.9
SGA_v2.0_scaffold7G03541 Striga asiatica HOM05D005860 ORTHO05D006977 3.4e-84 316.6 426 66.2
PSO017G5933 Papaver somniferum HOM05D005860 ORTHO05D006977 5.0e-83 312.8 457 65.6
PSO478G3943 Papaver somniferum HOM05D005860 ORTHO05D006977 5.0e-83 312.8 457 65.0
Peaxi162Scf00420g00442 Petunia axillaris HOM05D005860 ORTHO05D006977 6.5e-83 312.4 477 61.0
THA.LOC104825612 Tarenaya hassleriana HOM05D005860 ORTHO05D006977 6.5e-83 312.4 453 62.7
Lalb_Chr02g0157831 Lupinus albus HOM05D005860 ORTHO05D006977 8.5e-83 312.0 434 70.0
MD17G1015100 Malus domestica HOM05D005860 ORTHO05D006977 1.9e-82 310.8 442 71.3
Glyma.19G075100 Glycine max HOM05D005860 ORTHO05D006977 2.5e-82 310.5 434 65.7
Phvul.004G147000 Phaseolus vulgaris HOM05D005860 ORTHO05D006977 7.2e-82 308.9 435 69.7
Sopen02g038590 Solanum pennellii HOM05D005860 ORTHO05D006977 7.2e-82 308.9 442 63.6
PGSC0003DMG400020220 Solanum tuberosum HOM05D005860 ORTHO05D006977 7.2e-82 308.9 442 63.3
TPR.G5727 Trifolium pratense HOM05D001503 ORTHO05D003820 1.6e-81 307.8 510 59.0
Medtr2g034600 Medicago truncatula HOM05D005860 ORTHO05D006977 2.1e-81 307.4 478 61.3
Solyc02g093940.3 Solanum lycopersicum HOM05D005860 ORTHO05D006977 2.1e-81 307.4 442 63.6
Nitab4.5_0009757g0020 Nicotiana tabacum HOM05D005860 ORTHO05D006977 6.1e-81 305.8 445 63.8
VMungo0464G0018 Vigna mungo HOM05D005860 ORTHO05D006977 1.4e-80 304.7 435 69.0
Aqoxy5G03469 Aquilegia oxysepala HOM05D005860 ORTHO05D006977 3.9e-80 303.1 438 67.4
Ciclev10011572m.g Citrus clementina HOM05D005860 ORTHO05D006977 5.2e-80 302.8 431 64.7
Sed0023405 Sechium edule HOM05D005860 ORTHO05D006977 5.2e-80 302.8 456 66.2
TWI56G1326 Tripterygium wilfordii HOM05D005860 ORTHO05D006977 5.2e-80 302.8 435 67.6
CAN.G473.79 Capsicum annuum HOM05D005860 ORTHO05D006977 6.7e-80 302.4 471 60.1
PSO782G4049 Papaver somniferum HOM05D005860 ORTHO05D006977 6.7e-80 302.4 432 63.0
Nitab4.5_0002887g0110 Nicotiana tabacum HOM05D005860 ORTHO05D006977 8.8e-80 302.0 477 60.0
FAN09G0694 Fragaria x ananassa HOM05D005860 ORTHO05D006977 3.3e-79 300.1 442 71.0
FvH4_6g53060 Fragaria vesca HOM05D005860 ORTHO05D006977 4.4e-79 299.7 442 70.4
Phvul.004G055500 Phaseolus vulgaris HOM05D005860 ORTHO05D006977 7.4e-79 298.9 430 61.6
FAN05G4081 Fragaria x ananassa HOM05D005860 ORTHO05D006977 8.2e-78 295.4 442 69.7
Lju41A50T54 Lonicera japonica HOM05D005860 ORTHO05D006977 8.2e-78 295.4 428 66.4
ATR0686G114 Amborella trichopoda HOM05D005860 ORTHO05D006977 1.4e-77 294.7 454 59.5
Glyma.05G075600 Glycine max HOM05D005860 ORTHO05D006977 1.4e-77 294.7 434 63.1
PSO063G3212 Papaver somniferum HOM05D005860 ORTHO05D006977 1.4e-77 294.7 432 61.8
unitig_0.g543 Utricularia gibba HOM05D005860 ORTHO05D006977 4.1e-77 293.1 450 62.4
RcHm_v2.0_Chr2g0174841 Rosa chinensis HOM05D005860 ORTHO05D006977 2.6e-76 290.4 442 69.2
Psat1g161720 Pisum sativum HOM05D005860 ORTHO05D006977 5.9e-76 289.3 424 66.0
Sp7g12700 Schrenkiella parvula HOM05D005860 ORTHO05D006977 7.7e-76 288.9 451 61.2
AL7G41520 Arabidopsis lyrata HOM05D005860 ORTHO05D006977 1.0e-75 288.5 452 61.1
ClCG01G016270 Citrullus lanatus HOM05D005860 ORTHO05D006977 1.3e-75 288.1 435 66.0
TAR629G2046 Trochodendron aralioides HOM05D005860 ORTHO05D006977 5.0e-75 286.2 461 56.2
Thhalv10025001m.g Eutrema salsugineum HOM05D005860 ORTHO05D006977 6.5e-75 285.8 451 61.2
CsaV3_6G042570 Cucumis sativus L. HOM05D005860 ORTHO05D006977 8.5e-75 285.4 432 67.1
AT4G14605 Arabidopsis thaliana HOM05D005860 ORTHO05D006977 1.1e-74 285.0 452 61.3
BraA01t02219Z Brassica rapa HOM05D005860 ORTHO05D006977 1.1e-74 285.0 430 63.0
Carub.0007s2760 Capsella rubella HOM05D005860 ORTHO05D006977 1.9e-74 284.3 452 60.8
Haze_14838 Corylus avellana HOM05D005860 ORTHO05D006977 1.9e-74 284.3 479 58.7
ECA232G2764 Erigeron canadensis HOM05D005860 ORTHO05D006977 1.9e-74 284.3 434 62.9
A01p23060 Brassica napus HOM05D005860 ORTHO05D006977 2.5e-74 283.9 432 61.6
BcaNung00353 Brassica carinata HOM05D005860 ORTHO05D006977 7.2e-74 282.3 429 62.2
BcaC09g50132 Brassica carinata HOM05D005860 ORTHO05D006977 9.4e-74 282.0 430 61.9
CARHR220830 Cardamine hirsuta HOM05D005860 ORTHO05D006977 1.6e-73 281.2 431 63.3
MELO3C007497.2 Cucumis melo HOM05D005860 ORTHO05D006977 4.7e-73 279.6 424 67.0
C01p28690 Brassica napus HOM05D005860 ORTHO05D006977 1.8e-72 277.7 430 61.4
BolC1t02795H Brassica oleracea HOM05D005860 ORTHO05D006977 1.8e-72 277.7 430 61.4
CDE09G0687 Ceratophyllum demersum HOM05D005860 ORTHO05D006977 1.8e-72 277.7 426 59.4
FAN14G2391 Fragaria x ananassa HOM05D005860 ORTHO05D006977 2.6e-71 273.9 448 57.1
HanXRQChr15g0486891 Helianthus annuus HOM05D005860 ORTHO05D006977 4.4e-71 273.1 477 59.7
CANSAT64G0040 Cannabis sativa HOM05D005860 ORTHO05D006977 3.7e-70 270.0 431 60.6
Aa31LG9G2730 Aethionema arabicum HOM05D005860 ORTHO05D006977 6.3e-70 269.2 453 58.7
Thecc.08G160800 Theobroma cacao HOM05D005860 ORTHO05D006977 5.3e-69 266.2 353 72.8
Nn4g22386 Nelumbo nucifera HOM05D005860 ORTHO05D006977 1.6e-68 264.6 350 57.7
CiPaw.01G128900 Carya illinoinensis HOM05D005860 ORTHO05D006977 2.1e-65 254.2 430 66.7
Zm00001eb246440 Zea mays HOM05D005860 ORTHO05D006977 6.1e-65 252.7 422 58.1
Sed0015041 Sechium edule HOM05D005860 ORTHO05D006977 2.3e-64 250.8 433 52.4
Gohir.D10G072200 Gossypium hirsutum HOM05D005860 ORTHO05D006977 7.0e-61 239.2 272 68.4
Rhsim08G0044700 Rhododendron simsii HOM05D005860 ORTHO05D006977 2.7e-60 237.3 442 48.2
Prupe.3G302700 Prunus persica HOM05D005860 ORTHO05D006977 3.5e-60 236.9 367 73.3
vmacro18326 Vaccinium macrocarpon HOM05D005860 ORTHO05D006977 1.3e-59 235.0 443 57.3
Rhsim08G0044500 Rhododendron simsii HOM05D005860 ORTHO05D006977 1.1e-58 231.9 452 49.3
Rhsim08G0045000 Rhododendron simsii HOM05D005860 ORTHO05D006977 1.4e-56 224.9 445 57.5
Rhsim08G0044400 Rhododendron simsii HOM05D005860 ORTHO05D006977 5.2e-56 223.0 445 53.7
Oeu050423.1 Olea europaea HOM05D005860 ORTHO05D006977 8.9e-56 222.2 198 63.1
Glyma.09G171700 Glycine max HOM05D005860 ORTHO05D006977 1.3e-54 218.4 187 63.6
Lsat_1_v5_gn_4_185440 Lactuca sativa HOM05D005860 ORTHO05D006977 1.6e-49 201.4 366 66.9
Cfa015733 Carpinus fangiana HOM05D005860 ORTHO05D006977 1.8e-45 188.0 163 64.4
HPP92_024250 Vanilla planifolia HOM05D005860 ORTHO05D006977 5.2e-40 169.9 339 58.7
HPP92_024230 Vanilla planifolia HOM05D005860 ORTHO05D006977 3.4e-39 167.2 332 60.8
Rhsim08G0044900 Rhododendron simsii HOM05D005860 ORTHO05D006977 1.0e-35 155.6 369 46.3
Migut.C00523 Erythranthe guttata HOM05D005860 ORTHO05D006977 3.3e-34 150.6 115 72.2
ATR0686G162 Amborella trichopoda HOM05D005860 ORTHO05D006977 9.5e-34 149.1 365 35.3
Haze_00763 Corylus avellana HOM05D005860 ORTHO05D006977 6.2e-33 146.4 355 41.4
Mapoly0029s0044 Marchantia polymorpha HOM05D005860 ORTHO05D006977 4.0e-32 143.7 420 42.4
FAN14G0528 Fragaria x ananassa HOM05D005860 ORTHO05D006977 1.2e-31 142.1 271 70.8
Os02g0602400 Oryza sativa ssp. japonica HOM05D005860 ORTHO05D006977 1.1e-29 135.6 268 51.9
ATR0609G011 Amborella trichopoda HOM05D005860 ORTHO05D006977 1.4e-24 118.6 273 37.7
Pp3c9_18330 Physcomitrium patens HOM05D005860 ORTHO05D006977 1.2e-23 115.5 431 43.6
Glyma.09G171766 Glycine max HOM05D005860 ORTHO05D006977 8.4e-22 109.4 146 69.2
Pp3c15_12290 Physcomitrium patens HOM05D005860 ORTHO05D006977 4.0e-16 90.5 167 33.5
HPP92_024251 Vanilla planifolia HOM05D005860 ORTHO05D006977 3.4e-15 87.4 64 64.1
TAR374G0650 Trochodendron aralioides HOM05D005860 ORTHO05D006977 5.8e-15 86.7 308 28.2
vmacro18330 Vaccinium macrocarpon HOM05D005860 ORTHO05D006977 7.6e-15 86.3 107 45.8
Rhsim08G0044800 Rhododendron simsii HOM05D005860 ORTHO05D006977 3.8e-14 84.0 72 62.5
AagrBONN_evm.TU.Sc2ySwM_117.926 Anthoceros agrestis HOM05D000273 ORTHO05D006977 2.4e-13 81.3 162 31.5
TPR.G88 Trifolium pratense HOM05D005860 ORTHO05D006977 4.2e-13 80.5 59 59.3
vmacro18328 Vaccinium macrocarpon HOM05D005860 ORTHO05D006977 7.1e-13 79.7 109 43.1
TAR374G0834 Trochodendron aralioides HOM05D005860 ORTHO05D006977 2.1e-12 78.2 55 69.1
Sed0001458 Sechium edule HOM05D005860 ORTHO05D006977 3.9e-11 73.9 59 72.9
Mapoly0007s0012 Marchantia polymorpha HOM05D005860 ORTHO05D006977 7.3e-10 69.7 91 42.9
Glyma.02G108900 Glycine max HOM05D001557 ORTHO05D001299 4.9e-06 57.0 58 44.8
Potri.010G167400 Populus trichocarpa HOM05D001557 ORTHO05D001299 6.4e-06 56.6 58 46.6


User provided reference genes

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