Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.03g140550 Amaranthus hybridus HOM05D006223 ORTHO05D009080 1.8e-93 346.3 223 100.0
AUR62040240 Chenopodium quinoa HOM05D006223 ORTHO05D009080 3.7e-59 232.3 199 64.3
AUR62004007 Chenopodium quinoa HOM05D006223 ORTHO05D009080 2.4e-58 229.6 197 64.5
Hund16399 Selenicereus undatus HOM05D006223 ORTHO05D009080 1.7e-51 206.8 201 56.2
Sed0023944 Sechium edule HOM05D006223 ORTHO05D009080 2.3e-45 186.4 200 53.0
MELO3C020909.2 Cucumis melo HOM05D006223 ORTHO05D009080 1.2e-44 184.1 200 52.5
PGR004G2352 Punica granatum HOM05D006223 ORTHO05D009080 7.6e-44 181.4 157 62.4
Nitab4.5_0002119g0100 Nicotiana tabacum HOM05D006223 ORTHO05D009080 1.3e-43 180.6 197 48.2
Nitab4.5_0000142g0070 Nicotiana tabacum HOM05D006223 ORTHO05D009080 3.8e-43 179.1 197 48.7
Dinv04050 Davidia involucrata HOM05D006223 ORTHO05D009080 4.9e-43 178.7 205 51.2
TAR625G1165 Trochodendron aralioides HOM05D006223 ORTHO05D009080 1.1e-42 177.6 197 51.8
Haze_15285 Corylus avellana HOM05D006223 ORTHO05D009080 1.9e-42 176.8 161 56.5
CAN.G1075.35 Capsicum annuum HOM05D006223 ORTHO05D009080 4.1e-42 175.6 201 47.8
Lj7A96T45 Lonicera japonica HOM05D006223 ORTHO05D009080 5.4e-42 175.3 199 50.8
GSVIVG01000109001 Vitis vinifera HOM05D006223 ORTHO05D009080 2.7e-41 172.9 157 58.6
Actinidia11984 Actinidia chinensis HOM05D006223 ORTHO05D009080 4.6e-41 172.2 158 60.1
Atru.chr3.1008 Acer truncatum HOM05D006223 ORTHO05D009080 6.0e-41 171.8 164 58.5
GSVIVG01000118001 Vitis vinifera HOM05D006223 ORTHO05D009080 7.8e-41 171.4 157 58.0
Glyma.17G160900 Glycine max HOM05D006223 ORTHO05D009080 1.0e-40 171.0 194 49.0
CSS0009729 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 1.7e-40 170.2 194 49.5
Manes.12G113900 Manihot esculenta HOM05D006223 ORTHO05D009080 2.3e-40 169.9 152 57.2
MSTRG.23673 Avicennia marina HOM05D006223 ORTHO05D009080 3.0e-40 169.5 158 58.9
FAN19G0818 Fragaria x ananassa HOM05D006223 ORTHO05D009080 3.9e-40 169.1 193 52.3
FAN28G1261 Fragaria x ananassa HOM05D006223 ORTHO05D009080 3.9e-40 169.1 193 52.3
Duzib147G0613 Durio zibethinus HOM05D006223 ORTHO05D009080 5.1e-40 168.7 153 56.2
Cpa.g.sc6.19 Carica papaya HOM05D006223 ORTHO05D009080 8.6e-40 167.9 200 51.0
Potri.001G172500 Populus trichocarpa HOM05D006223 ORTHO05D009080 1.1e-39 167.5 201 51.7
Prupe.6G221000 Prunus persica HOM05D006223 ORTHO05D009080 1.1e-39 167.5 201 57.7
Migut.H00350 Erythranthe guttata HOM05D006223 ORTHO05D009080 1.9e-39 166.8 194 48.5
Lj4g0019733 Lotus japonicus HOM05D006223 ORTHO05D009080 1.9e-39 166.8 199 47.7
FvH4_1g17670 Fragaria vesca HOM05D006223 ORTHO05D009080 2.5e-39 166.4 193 52.3
Eucgr.I00706 Eucalyptus grandis HOM05D006223 ORTHO05D009080 3.3e-39 166.0 205 48.8
CANSAT01G0277 Cannabis sativa HOM05D006223 ORTHO05D009080 4.3e-39 165.6 200 47.5
Sabra01G0139200 Salix brachista HOM05D006223 ORTHO05D009080 5.6e-39 165.2 202 47.5
Thecc.01G072400 Theobroma cacao HOM05D006223 ORTHO05D009080 5.6e-39 165.2 157 56.7
Cfa004130 Carpinus fangiana HOM05D006223 ORTHO05D009080 7.3e-39 164.9 146 58.9
Sopen02g036940 Solanum pennellii HOM05D006223 ORTHO05D009080 1.2e-38 164.1 159 52.8
Psat4g081960 Pisum sativum HOM05D006223 ORTHO05D009080 1.6e-38 163.7 194 44.8
PGSC0003DMG400021418 Solanum tuberosum HOM05D006223 ORTHO05D009080 1.6e-38 163.7 206 46.6
Cc06_g22830 Coffea canephora HOM05D006223 ORTHO05D009080 2.1e-38 163.3 157 56.1
Ciclev10026365m.g Citrus clementina HOM05D006223 ORTHO05D009080 2.8e-38 162.9 198 49.5
Solyc02g092390.3 Solanum lycopersicum HOM05D006223 ORTHO05D009080 2.8e-38 162.9 159 52.8
DCAR_025799 Daucus carota HOM05D006223 ORTHO05D009080 3.6e-38 162.5 193 47.2
FAN26G2055 Fragaria x ananassa HOM05D006223 ORTHO05D009080 3.6e-38 162.5 193 51.3
TWI09G0585 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 4.7e-38 162.2 200 50.0
TWI73G0604 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 4.7e-38 162.2 204 50.0
Phvul.003G235100 Phaseolus vulgaris HOM05D006223 ORTHO05D009080 6.2e-38 161.8 196 48.0
Aqoxy5G00869 Aquilegia oxysepala HOM05D006223 ORTHO05D009080 8.1e-38 161.4 154 53.9
CiPaw.01G004700 Carya illinoinensis HOM05D006223 ORTHO05D009080 8.1e-38 161.4 152 54.6
Ca_22107_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 1.1e-37 161.0 198 45.5
Ca_22114_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 1.1e-37 161.0 198 45.5
Medtr4g097030 Medicago truncatula HOM05D006223 ORTHO05D009080 1.8e-37 160.2 196 44.4
TPR.G24252 Trifolium pratense HOM05D006223 ORTHO05D009080 1.8e-37 160.2 196 44.9
Glyma.05G105500 Glycine max HOM05D006223 ORTHO05D009080 2.4e-37 159.8 193 48.2
VMungo0251G3324 Vigna mungo HOM05D006223 ORTHO05D009080 2.4e-37 159.8 158 54.4
HanXRQChr15g0472641 Helianthus annuus HOM05D006223 ORTHO05D009080 3.1e-37 159.5 152 55.9
ClCG02G012630 Citrullus lanatus HOM05D003401 ORTHO05D003906 5.2e-37 158.7 182 51.6
Gohir.A11G215000 Gossypium hirsutum HOM05D006223 ORTHO05D009080 1.2e-36 157.5 163 51.5
ECA246G3554 Erigeron canadensis HOM05D006223 ORTHO05D009080 1.5e-36 157.1 151 55.0
RcHm_v2.0_Chr2g0108001 Rosa chinensis HOM05D006223 ORTHO05D009080 1.5e-36 157.1 200 49.5
EL10Ac6g15621 Beta vulgaris HOM05D006223 ORTHO05D009080 4.4e-36 155.6 197 48.7
Lsat_1_v5_gn_3_86181 Lactuca sativa HOM05D006223 ORTHO05D009080 4.4e-36 155.6 156 53.2
Nn5g30588 Nelumbo nucifera HOM05D006223 ORTHO05D009080 4.4e-36 155.6 204 43.6
Lalb_Chr05g0225861 Lupinus albus HOM05D006223 ORTHO05D009080 1.3e-35 154.1 197 46.2
PSO170G6824 Papaver somniferum HOM05D006223 ORTHO05D009080 1.3e-35 154.1 195 46.2
Gorai.007G223400 Gossypium raimondii HOM05D006223 ORTHO05D009080 2.9e-35 152.9 164 49.4
THA.LOC104827599 Tarenaya hassleriana HOM05D006223 ORTHO05D009080 4.9e-35 152.1 198 46.5
Gohir.D11G208400 Gossypium hirsutum HOM05D006223 ORTHO05D009080 8.4e-35 151.4 164 48.8
MD15G1297100 Malus domestica HOM05D006223 ORTHO05D009080 1.1e-34 151.0 155 56.8
Rhsim10G0099700 Rhododendron simsii HOM05D006223 ORTHO05D009080 4.2e-34 149.1 177 52.5
arahy.Tifrunner.gnm1.ann1.BP3FRD Arachis hypogaea HOM05D006223 ORTHO05D009080 1.6e-33 147.1 196 47.4
Peaxi162Scf00548g00643 Petunia axillaris HOM05D006223 ORTHO05D009080 2.7e-33 146.4 150 52.0
Zm00001eb400790 Zea mays HOM05D006223 ORTHO05D009080 4.6e-33 145.6 202 43.1
Hma1.2p1_0852F.1_g228470 Hydrangea macrophylla HOM05D006223 ORTHO05D009080 2.3e-32 143.3 114 64.9
Aa31LG4G18340 Aethionema arabicum HOM05D006223 ORTHO05D009080 2.5e-31 139.8 197 40.6
Os03g0201200 Oryza sativa ssp. japonica HOM05D006223 ORTHO05D009080 4.3e-31 139.0 200 45.5
vmacro05408 Vaccinium macrocarpon HOM05D006223 ORTHO05D009080 5.6e-31 138.7 182 45.1
ATR1153G042 Amborella trichopoda HOM05D006223 ORTHO05D009080 1.3e-30 137.5 199 43.2
Thhalv10010709m.g Eutrema salsugineum HOM05D006223 ORTHO05D009080 3.1e-29 132.9 202 43.6
SGA_v2.0_scaffold72G24074 Striga asiatica HOM05D006223 ORTHO05D009080 4.0e-29 132.5 168 44.0
AL5G29900 Arabidopsis lyrata HOM05D006223 ORTHO05D009080 6.9e-29 131.7 196 39.8
AT3G49890 Arabidopsis thaliana HOM05D006223 ORTHO05D009080 9.0e-29 131.3 193 39.4
arahy.Tifrunner.gnm1.ann1.83HTFG Arachis hypogaea HOM05D006223 ORTHO05D009080 9.0e-29 131.3 231 39.8
Carub.0005s1625 Capsella rubella HOM05D006223 ORTHO05D009080 1.5e-28 130.6 193 43.5
HPP92_024913 Vanilla planifolia HOM05D006223 ORTHO05D009080 2.6e-28 129.8 150 47.3
Sp5g12220 Schrenkiella parvula HOM05D006223 ORTHO05D009080 7.6e-28 128.3 201 38.8
CDE06G0771 Ceratophyllum demersum HOM05D006223 ORTHO05D009080 6.4e-27 125.2 191 40.8
CARHR158970 Cardamine hirsuta HOM05D006223 ORTHO05D009080 8.4e-27 124.8 196 39.3
A03p47580 Brassica napus HOM05D006223 ORTHO05D009080 1.9e-26 123.6 196 39.3
BraA03t13871Z Brassica rapa HOM05D006223 ORTHO05D009080 1.0e-24 117.9 192 40.1
C07p45560 Brassica napus HOM05D006223 ORTHO05D009080 2.3e-24 116.7 159 42.8
BolC7t45077H Brassica oleracea HOM05D006223 ORTHO05D009080 2.3e-24 116.7 159 42.8
CSS0032370 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 3.3e-23 112.8 91 64.8
SEGI_10369 Sequoiadendron giganteum HOM05D006223 ORTHO05D009080 2.1e-22 110.2 159 41.5
Sc16g0002890 Simmondsia chinensis HOM05D006223 ORTHO05D009080 1.4e-21 107.5 132 47.0
SHI12778 Sapria himalayana HOM05D006223 ORTHO05D009080 4.5e-12 75.9 172 31.4
FAN23G0832 Fragaria x ananassa HOM05D006223 ORTHO05D009080 5.8e-12 75.5 123 43.1
AagrBONN_evm.TU.Sc2ySwM_228.3102 Anthoceros agrestis HOM05D004796 ORTHO05D006527 7.6e-12 75.1 160 31.2
unitig_21.g20422 Utricularia gibba HOM05D005082 ORTHO05D006474 7.6e-12 75.1 73 54.8
Pp3c5_6560 Physcomitrium patens HOM05D006223 ORTHO05D009080 2.9e-11 73.2 166 33.1
C08p24920 Brassica napus HOM05D006223 ORTHO05D009080 1.1e-10 71.2 103 39.8
BolC8t50110H Brassica oleracea HOM05D006223 ORTHO05D009080 3.2e-10 69.7 92 42.4
HPP92_024909 Vanilla planifolia HOM05D006223 ORTHO05D009080 1.2e-09 67.8 71 50.7
COL.COLO4_11574 Corchorus olitorius HOM05D006223 ORTHO05D009080 1.6e-06 57.4 58 50.0


User provided reference genes

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