Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.03g139750 Amaranthus hybridus HOM05D001975 ORTHO05D011412 4.9e-76 287.7 145 100.0
Hund14130 Selenicereus undatus HOM05D001975 ORTHO05D011412 1.2e-42 176.8 137 65.7
Sc03g0000990 Simmondsia chinensis HOM05D001975 ORTHO05D011412 1.9e-27 126.3 187 43.9
Gohir.A11G044500 Gossypium hirsutum HOM05D001975 ORTHO05D011412 1.0e-25 120.6 116 50.9
Duzib147G1176 Durio zibethinus HOM05D001975 ORTHO05D011412 3.0e-25 119.0 104 55.8
PGR119G0929 Punica granatum HOM05D001975 ORTHO05D011412 1.6e-23 113.2 111 55.0
Gorai.007G051600 Gossypium raimondii HOM05D000225 ORTHO05D001817 6.2e-23 111.3 106 49.1
Eucgr.I02482 Eucalyptus grandis HOM05D001975 ORTHO05D011412 1.8e-22 109.8 109 51.4
Ciclev10026644m.g Citrus clementina HOM05D001975 ORTHO05D011412 3.1e-22 109.0 103 52.4
QL06p044648 Quercus lobata HOM05D001975 ORTHO05D011412 9.0e-22 107.5 110 50.9
Thecc.01G042900 Theobroma cacao HOM05D001975 ORTHO05D011412 9.0e-22 107.5 104 51.9
Prupe.7G147700 Prunus persica HOM05D001975 ORTHO05D011412 2.6e-21 105.9 109 55.0
AUR62008026 Chenopodium quinoa HOM05D000225 ORTHO05D011412 3.4e-21 105.5 141 47.5
Sabra07G0027800 Salix brachista HOM05D001975 ORTHO05D011412 3.8e-20 102.1 109 52.3
GSVIVG01019037001 Vitis vinifera HOM05D001975 ORTHO05D011412 4.9e-20 101.7 106 51.9
Manes.13G135100 Manihot esculenta HOM05D001975 ORTHO05D011412 4.2e-19 98.6 106 48.1
MD15G1270400 Malus domestica HOM05D001975 ORTHO05D011412 7.1e-19 97.8 109 49.5
TAR381G1222 Trochodendron aralioides HOM05D001975 ORTHO05D011412 9.3e-19 97.4 103 49.5
TWI09G0849 Tripterygium wilfordii HOM05D001975 ORTHO05D011412 2.7e-18 95.9 109 46.8
AUR62003206 Chenopodium quinoa HOM05D000225 ORTHO05D001817 1.0e-17 94.0 121 46.3
Potri.007G032000 Populus trichocarpa HOM05D001975 ORTHO05D011412 1.1e-16 90.5 106 50.0
Haze_15146 Corylus avellana HOM05D000225 ORTHO05D001817 5.7e-16 88.2 109 46.8
FvH4_1g14181 Fragaria vesca HOM05D001975 ORTHO05D011412 5.7e-16 88.2 113 46.9
RcHm_v2.0_Chr2g0102851 Rosa chinensis HOM05D001975 ORTHO05D011412 9.7e-16 87.4 113 46.9
Atru.chr3.500 Acer truncatum HOM05D001975 ORTHO05D011412 1.6e-15 86.7 110 48.2
Oeu049322.1 Olea europaea HOM05D001975 ORTHO05D011412 1.8e-14 83.2 113 46.9
Atru.chr3.501 Acer truncatum HOM05D001975 ORTHO05D011412 9.0e-14 80.9 110 46.4
Gohir.D11G048000 Gossypium hirsutum HOM05D001975 ORTHO05D011412 9.0e-14 80.9 101 42.6
Dinv26792 Davidia involucrata HOM05D000225 ORTHO05D001817 4.5e-13 78.6 61 63.9
FAN23G1734 Fragaria x ananassa HOM05D001975 ORTHO05D011412 1.0e-12 77.4 75 52.0
FAN23G2412 Fragaria x ananassa HOM05D000225 ORTHO05D001817 3.8e-12 75.5 84 47.6
CiPaw.01G031600 Carya illinoinensis HOM05D001975 ORTHO05D011412 8.5e-12 74.3 135 34.8
CANSAT01G1886 Cannabis sativa HOM05D001975 ORTHO05D011412 1.1e-11 73.9 112 39.3
Gorai.008G070300 Gossypium raimondii HOM05D001975 ORTHO05D011412 2.5e-11 72.8 73 50.7
FAN26G1917 Fragaria x ananassa HOM05D000225 ORTHO05D001817 2.1e-10 69.7 104 44.2
FvH4_1g14252 Fragaria vesca HOM05D001975 ORTHO05D011412 7.9e-10 67.8 62 53.2
COL.COLO4_22150 Corchorus olitorius HOM05D001975 ORTHO05D011412 2.0e-08 63.2 47 61.7
CDE04G0147 Ceratophyllum demersum HOM05D001975 ORTHO05D002436 5.3e-06 55.1 109 34.9
Nitab4.5_0003816g0100 Nicotiana tabacum HOM05D001975 ORTHO05D002436 6.9e-06 54.7 114 34.2
HPP92_018820 Vanilla planifolia HOM05D001975 ORTHO05D002436 6.9e-06 54.7 109 35.8


User provided reference genes

Program Settings