Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 0.0e+00 1583.9 831 100.0
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 0.0e+00 1244.2 842 78.1
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 0.0e+00 1219.5 858 75.9
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 0.0e+00 1207.6 839 76.0
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 6.5e-282 974.2 898 59.2
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 1.4e-263 913.3 862 60.1
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 2.9e-258 895.6 843 58.4
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 2.1e-256 889.4 843 58.2
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 2.3e-255 885.9 796 60.9
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 4.0e-255 885.2 844 58.5
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 5.2e-255 884.8 856 57.4
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 1.3e-253 880.2 800 61.0
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 2.8e-253 879.0 860 57.9
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 4.1e-252 875.2 855 58.6
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 5.3e-252 874.8 864 56.1
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 7.0e-252 874.4 858 56.3
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 1.2e-251 873.6 785 59.6
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 1.6e-251 873.2 783 60.4
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 1.6e-251 873.2 805 59.3
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.6e-251 873.2 772 61.8
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 5.0e-250 868.2 862 56.4
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 1.1e-249 867.1 848 56.4
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 4.7e-248 861.7 747 62.1
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 3.4e-246 855.5 804 58.7
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 7.5e-246 854.4 861 54.9
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 1.3e-242 843.6 844 55.2
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 2.9e-242 842.4 844 56.4
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 3.8e-242 842.0 795 58.2
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 5.0e-242 841.6 784 59.4
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 6.5e-242 841.3 774 59.3
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 2.5e-241 839.3 781 57.9
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 3.2e-241 839.0 772 59.5
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 9.5e-241 837.4 867 54.9
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 9.5e-241 837.4 831 57.4
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 1.2e-240 837.0 772 58.8
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 2.6e-238 829.3 786 58.5
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 1.7e-237 826.6 819 56.5
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 3.7e-237 825.5 808 56.6
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 1.1e-236 823.9 801 57.1
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 1.6e-235 820.1 814 56.0
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 1.6e-235 820.1 808 56.6
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 1.0e-234 817.4 852 54.2
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 2.9e-234 815.8 845 54.9
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 4.3e-233 812.0 782 57.5
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 5.6e-233 811.6 788 56.5
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 2.1e-232 809.7 844 55.7
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 2.0e-230 803.1 749 59.4
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 7.5e-230 801.2 790 56.7
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 2.4e-228 796.2 844 53.4
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 1.7e-226 790.0 783 55.6
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 2.5e-225 786.2 809 55.1
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 6.8e-223 778.1 858 52.6
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 1.5e-222 776.9 828 53.0
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 2.0e-222 776.5 821 53.6
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 2.6e-222 776.2 828 52.9
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 2.6e-222 776.2 826 52.8
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 3.4e-222 775.8 783 54.9
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 4.4e-222 775.4 757 56.4
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 4.9e-221 771.9 800 53.9
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 1.4e-220 770.4 828 53.7
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 4.1e-220 768.8 780 55.0
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 4.1e-220 768.8 715 58.7
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 7.8e-219 764.6 849 51.5
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 1.3e-218 763.8 769 55.0
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 1.7e-218 763.5 827 52.5
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 6.6e-218 761.5 757 56.0
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 1.9e-217 760.0 749 56.1
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 9.5e-217 757.7 837 53.2
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 1.4e-215 753.8 780 54.9
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 6.8e-215 751.5 792 53.5
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 5.8e-214 748.4 769 54.7
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 7.5e-214 748.0 827 52.8
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 6.4e-213 745.0 808 53.2
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 1.4e-212 743.8 776 53.1
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 7.1e-212 741.5 750 54.7
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 1.7e-210 736.9 794 53.4
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 3.9e-210 735.7 760 53.9
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 3.6e-208 729.2 760 54.9
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 4.0e-207 725.7 856 51.9
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 3.3e-201 706.1 716 54.6
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 1.2e-200 704.1 836 52.0
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 3.8e-189 666.0 769 48.4
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 3.8e-189 666.0 757 49.8
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 7.9e-187 658.3 716 50.7
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 1.8e-186 657.1 693 54.0
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 1.2e-182 644.4 789 47.4
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 4.1e-167 592.8 462 66.0
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 1.3e-165 587.8 509 61.9
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 4.3e-161 572.8 757 44.6
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.0e-158 563.9 518 59.8
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 1.3e-157 561.2 690 48.8
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 1.7e-157 560.8 581 54.7
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 2.0e-153 547.4 544 54.4
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 1.7e-152 544.3 590 53.4
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 3.1e-151 540.0 475 58.5
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 3.0e-146 523.5 859 42.1
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 1.1e-143 515.0 520 54.2
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 2.0e-142 510.8 532 53.0
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 1.0e-141 508.4 572 53.3
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 3.1e-127 460.3 633 45.5
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 1.6e-118 431.4 877 37.1
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 8.6e-109 399.1 791 35.8
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 1.6e-91 341.7 784 32.9
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 1.6e-78 298.5 365 44.7
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 2.3e-77 294.7 273 59.7
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 3.6e-75 287.3 253 62.8
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 4.6e-70 270.4 274 52.2
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 9.6e-68 262.7 612 31.7
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 6.9e-66 256.5 232 60.3
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 8.4e-64 249.6 205 62.4
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 5.1e-61 240.4 260 53.1
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 2.7e-54 218.0 180 62.8
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 7.4e-52 209.9 845 25.9
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 3.1e-18 98.2 147 42.9
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 1.6e-17 95.9 158 36.7
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 1.2e-12 79.7 113 44.2
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 3.4e-12 78.2 110 43.6
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 4.4e-12 77.8 68 54.4
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 1.4e-10 72.8 125 37.6
MBI15_g33086_MAGBIO Magnolia biondii HOM05D001356 ORTHO05D003895 2.8e-06 58.5 207 28.5


User provided reference genes

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