Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g131100 Amaranthus hybridus HOM05D006885 ORTHO05D008606 4.8e-38 160.6 78 100.0
Ah.03g135790 Amaranthus hybridus HOM05D006885 ORTHO05D008606 3.4e-07 58.2 34 82.4
AUR62005687 Chenopodium quinoa HOM05D006885 ORTHO05D008606 3.4e-07 58.2 34 82.4
AUR62028871 Chenopodium quinoa HOM05D006885 ORTHO05D008606 3.4e-07 58.2 34 82.4
EL10Ac6g13573 Beta vulgaris HOM05D006885 ORTHO05D008606 1.3e-06 56.2 33 81.8
TWI75G1759 Tripterygium wilfordii HOM05D006885 ORTHO05D008606 1.7e-06 55.8 34 76.5
MSTRG.471 Avicennia marina HOM05D006885 ORTHO05D008606 2.2e-06 55.5 34 76.5
Oeu011334.1 Olea europaea HOM05D006885 ORTHO05D008606 2.2e-06 55.5 34 76.5
Oeu044483.1 Olea europaea HOM05D006885 ORTHO05D008606 2.2e-06 55.5 34 76.5
Peaxi162Scf00962g00024 Petunia axillaris HOM05D006885 ORTHO05D008606 2.2e-06 55.5 34 76.5
Hund25491 Selenicereus undatus HOM05D006885 ORTHO05D008606 2.2e-06 55.5 34 76.5
PGSC0003DMG400011888 Solanum tuberosum HOM05D006885 ORTHO05D008606 2.2e-06 55.5 34 76.5
CSS0039361 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 3.7e-06 54.7 46 58.7
Duzib248G1150 Durio zibethinus HOM05D006885 ORTHO05D008606 3.7e-06 54.7 34 76.5
CAN.G1264.4 Capsicum annuum HOM05D006885 ORTHO05D008606 4.9e-06 54.3 34 73.5
Nitab4.5_0000913g0010 Nicotiana tabacum HOM05D006885 ORTHO05D008606 4.9e-06 54.3 34 73.5
Sopen01g005380 Solanum pennellii HOM05D006885 ORTHO05D008606 4.9e-06 54.3 34 73.5
Aa31LG7G9990 Aethionema arabicum HOM05D006885 ORTHO05D008606 8.3e-06 53.5 34 73.5
BcaB03g13983 Brassica carinata HOM05D006885 ORTHO05D008606 8.3e-06 53.5 34 73.5
BcaC01g01613 Brassica carinata HOM05D006885 ORTHO05D008606 8.3e-06 53.5 34 73.5
BcaC01g06952 Brassica carinata HOM05D006885 ORTHO05D008606 8.3e-06 53.5 34 73.5
BcaC06g35293 Brassica carinata HOM05D006885 ORTHO05D008606 8.3e-06 53.5 34 73.5
A07p11750 Brassica napus HOM05D006885 ORTHO05D008606 8.3e-06 53.5 34 73.5
A08p26290 Brassica napus HOM05D006885 ORTHO05D008606 8.3e-06 53.5 34 73.5
C03p73770 Brassica napus HOM05D006885 ORTHO05D008606 8.3e-06 53.5 34 73.5
C07p17740 Brassica napus HOM05D006885 ORTHO05D008606 8.3e-06 53.5 34 73.5
BolC3t19669H Brassica oleracea HOM05D006885 ORTHO05D008606 8.3e-06 53.5 34 73.5
BolC7t42280H Brassica oleracea HOM05D006885 ORTHO05D008606 8.3e-06 53.5 34 73.5
BraA07t28960Z Brassica rapa HOM05D006885 ORTHO05D008606 8.3e-06 53.5 34 73.5
BraA08t34580Z Brassica rapa HOM05D006885 ORTHO05D008606 8.3e-06 53.5 34 73.5
Duzib052G0936 Durio zibethinus HOM05D006885 ORTHO05D008606 8.3e-06 53.5 34 73.5
Migut.K00992 Erythranthe guttata HOM05D006885 ORTHO05D008606 8.3e-06 53.5 34 73.5
Gohir.A04G101300 Gossypium hirsutum HOM05D006885 ORTHO05D008606 8.3e-06 53.5 34 73.5
Gohir.D04G140400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 8.3e-06 53.5 34 73.5
Gorai.012G125400 Gossypium raimondii HOM05D006885 ORTHO05D008606 8.3e-06 53.5 34 73.5
QL03p050754 Quercus lobata HOM05D006885 ORTHO05D008606 8.3e-06 53.5 55 50.9
Thecc.02G198000 Theobroma cacao HOM05D006885 ORTHO05D008606 8.3e-06 53.5 34 73.5


User provided reference genes

Program Settings