Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g130890 Amaranthus hybridus HOM05D002231 ORTHO05D006103 1.5e-95 352.8 178 100.0
EL10Ac6g13507 Beta vulgaris HOM05D002231 ORTHO05D006103 8.3e-78 293.9 193 80.3
AUR62028925 Chenopodium quinoa HOM05D002231 ORTHO05D006103 6.0e-76 287.7 193 77.7
AUR62005623 Chenopodium quinoa HOM05D002231 ORTHO05D006103 2.1e-60 236.1 193 66.3
Hma1.2p1_0275F.1_g110740 Hydrangea macrophylla HOM05D002231 ORTHO05D006103 7.8e-60 234.2 224 62.5
Cfa009373 Carpinus fangiana HOM05D002231 ORTHO05D006103 1.1e-58 230.3 207 64.3
SGA_v2.0_scaffold9G04675 Striga asiatica HOM05D002231 ORTHO05D006103 1.5e-58 229.9 210 62.4
CANSAT01G1083 Cannabis sativa HOM05D002231 ORTHO05D006103 4.3e-58 228.4 206 65.5
GSVIVG01010488001 Vitis vinifera HOM05D002231 ORTHO05D006103 7.3e-58 227.6 203 66.5
Actinidia30646 Actinidia chinensis HOM05D002231 ORTHO05D006103 9.6e-58 227.3 210 63.3
Hund25467 Selenicereus undatus HOM05D002231 ORTHO05D006103 1.3e-57 226.9 205 63.9
CSS0047868 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 1.6e-57 226.5 212 63.2
CSS0048016 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 1.6e-57 226.5 212 63.2
Dinv10954 Davidia involucrata HOM05D002231 ORTHO05D006103 2.1e-57 226.1 212 63.7
Thecc.02G207900 Theobroma cacao HOM05D002231 ORTHO05D006103 2.8e-57 225.7 217 60.8
Sc11g0000450 Simmondsia chinensis HOM05D002231 ORTHO05D006103 8.1e-57 224.2 225 60.9
Gorai.002G183300 Gossypium raimondii HOM05D002231 ORTHO05D006103 1.1e-56 223.8 214 61.2
MD16G1119800 Malus domestica HOM05D002231 ORTHO05D006103 1.1e-56 223.8 206 63.1
RcHm_v2.0_Chr4g0430201 Rosa chinensis HOM05D002231 ORTHO05D006103 2.4e-56 222.6 207 64.3
CiPaw.05G109300 Carya illinoinensis HOM05D002231 ORTHO05D006103 3.1e-56 222.2 209 62.2
Glyma.18G006100 Glycine max HOM05D002231 ORTHO05D006103 3.1e-56 222.2 195 65.1
CiPaw.06G102900 Carya illinoinensis HOM05D002231 ORTHO05D006103 4.0e-56 221.9 209 63.6
MD13G1119600 Malus domestica HOM05D002231 ORTHO05D006103 4.0e-56 221.9 206 62.6
Sopen04g017470 Solanum pennellii HOM05D002231 ORTHO05D006103 4.0e-56 221.9 201 64.2
Gohir.A01G160300 Gossypium hirsutum HOM05D002231 ORTHO05D006103 5.3e-56 221.5 214 61.7
Nn3g16455 Nelumbo nucifera HOM05D002231 ORTHO05D006103 5.3e-56 221.5 209 63.6
Dinv17566 Davidia involucrata HOM05D002231 ORTHO05D005593 6.9e-56 221.1 209 63.6
Manes.12G011000 Manihot esculenta HOM05D002231 ORTHO05D006103 1.2e-55 220.3 219 61.2
Gohir.D01G147100 Gossypium hirsutum HOM05D002231 ORTHO05D006103 1.5e-55 219.9 214 60.7
Prupe.1G225400 Prunus persica HOM05D002231 ORTHO05D006103 2.6e-55 219.2 207 64.3
TWI36G0137 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 2.6e-55 219.2 205 63.4
MSTRG.501 Avicennia marina HOM05D002231 ORTHO05D006103 3.4e-55 218.8 210 61.9
Potri.001G056500 Populus trichocarpa HOM05D002231 ORTHO05D006103 3.4e-55 218.8 213 60.1
Glyma.11G250900 Glycine max HOM05D002231 ORTHO05D006103 4.5e-55 218.4 195 64.6
Potri.003G172000 Populus trichocarpa HOM05D002231 ORTHO05D006103 4.5e-55 218.4 216 59.7
arahy.Tifrunner.gnm1.ann1.4LX5KX Arachis hypogaea HOM05D002231 ORTHO05D006103 9.9e-55 217.2 206 61.7
arahy.Tifrunner.gnm1.ann1.A5UQ16 Arachis hypogaea HOM05D002231 ORTHO05D006103 9.9e-55 217.2 206 61.7
Ciclev10032446m.g Citrus clementina HOM05D002231 ORTHO05D006103 2.2e-54 216.1 212 59.4
Cc11_g16940 Coffea canephora HOM05D002231 ORTHO05D006103 3.8e-54 215.3 209 63.2
CDE02G1146 Ceratophyllum demersum HOM05D002231 ORTHO05D006103 4.9e-54 214.9 197 61.4
FAN17G0493 Fragaria x ananassa HOM05D002231 ORTHO05D005593 4.9e-54 214.9 201 63.2
Migut.J00960 Erythranthe guttata HOM05D002231 ORTHO05D006103 6.4e-54 214.5 216 60.2
Lsat_1_v5_gn_4_3541 Lactuca sativa HOM05D002231 ORTHO05D006103 6.4e-54 214.5 213 59.6
PSO017G2330 Papaver somniferum HOM05D002231 ORTHO05D006103 8.4e-54 214.2 204 63.7
Duzib251G0325 Durio zibethinus HOM05D002231 ORTHO05D006103 1.1e-53 213.8 223 57.8
FAN22G0585 Fragaria x ananassa HOM05D002231 ORTHO05D006103 1.1e-53 213.8 202 62.9
TPR.G17792 Trifolium pratense HOM05D002231 ORTHO05D006103 1.1e-53 213.8 204 60.8
Lalb_Chr23g0278101 Lupinus albus HOM05D002231 ORTHO05D006103 1.4e-53 213.4 147 76.2
MSTRG.8006 Avicennia marina HOM05D002231 ORTHO05D006103 2.4e-53 212.6 210 61.0
Gohir.A04G139800 Gossypium hirsutum HOM05D002231 ORTHO05D006103 3.2e-53 212.2 219 60.7
Phvul.001G262200 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 3.2e-53 212.2 193 62.7
Psat5g096440 Pisum sativum HOM05D002231 ORTHO05D006103 3.2e-53 212.2 203 60.6
VMungo1383G1118 Vigna mungo HOM05D002231 ORTHO05D006103 3.2e-53 212.2 193 62.7
Sabra03G0125900 Salix brachista HOM05D002231 ORTHO05D005593 5.4e-53 211.5 215 59.1
Medtr3g085280 Medicago truncatula HOM05D002231 ORTHO05D006103 1.2e-52 210.3 207 60.4
Gorai.012G176000 Gossypium raimondii HOM05D002231 ORTHO05D006103 1.6e-52 209.9 219 60.3
Gohir.D04G183000 Gossypium hirsutum HOM05D002231 ORTHO05D006103 3.5e-52 208.8 220 60.0
Aqoxy5G03366 Aquilegia oxysepala HOM05D002231 ORTHO05D006103 6.0e-52 208.0 218 60.1
Nitab4.5_0002558g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 6.0e-52 208.0 211 59.2
QL03p052604 Quercus lobata HOM05D002231 ORTHO05D006103 2.3e-51 206.1 257 52.1
Lj6g0006303 Lotus japonicus HOM05D002231 ORTHO05D006103 3.0e-51 205.7 144 76.4
Eucgr.B03496 Eucalyptus grandis HOM05D002231 ORTHO05D006103 3.9e-51 205.3 227 55.9
Manes.13G011701 Manihot esculenta HOM05D002231 ORTHO05D006103 1.5e-50 203.4 154 70.8
PGR102G0892 Punica granatum HOM05D002231 ORTHO05D006103 2.5e-50 202.6 131 80.9
Rhsim12G0025500 Rhododendron simsii HOM05D002231 ORTHO05D006103 2.5e-50 202.6 251 54.2
Sed0020663 Sechium edule HOM05D002231 ORTHO05D006103 2.5e-50 202.6 210 58.1
FAN07G0699 Fragaria x ananassa HOM05D002231 ORTHO05D006103 3.3e-50 202.2 224 57.1
CARHR026970 Cardamine hirsuta HOM05D002231 ORTHO05D006103 5.6e-50 201.4 204 57.8
CsaV3_5G030240 Cucumis sativus L. HOM05D002231 ORTHO05D006103 5.6e-50 201.4 140 75.0
Sabra01G0040900 Salix brachista HOM05D002231 ORTHO05D006103 5.6e-50 201.4 229 55.5
Carub.0001s2592 Capsella rubella HOM05D002231 ORTHO05D006103 7.4e-50 201.1 204 56.9
FAN12G0590 Fragaria x ananassa HOM05D002231 ORTHO05D006103 7.4e-50 201.1 225 56.9
Peaxi162Scf00518g00424 Petunia axillaris HOM05D002231 ORTHO05D006103 7.4e-50 201.1 162 70.4
C05p26090 Brassica napus HOM05D002231 ORTHO05D006103 9.6e-50 200.7 199 55.3
Thhalv10008813m.g Eutrema salsugineum HOM05D002231 ORTHO05D006103 1.6e-49 199.9 202 56.9
AL1G40790 Arabidopsis lyrata HOM05D002231 ORTHO05D006103 2.1e-49 199.5 204 57.4
BraA07t28971Z Brassica rapa HOM05D002231 ORTHO05D006103 2.1e-49 199.5 204 56.4
THA.LOC104807538 Tarenaya hassleriana HOM05D002231 ORTHO05D006103 2.1e-49 199.5 209 55.0
Nitab4.5_0000067g0140 Nicotiana tabacum HOM05D002231 ORTHO05D006103 3.7e-49 198.7 236 53.8
BcaC06g35283 Brassica carinata HOM05D002231 ORTHO05D006103 6.2e-49 198.0 204 56.4
C07p17810 Brassica napus HOM05D002231 ORTHO05D006103 6.2e-49 198.0 204 56.4
BolC5t31328H Brassica oleracea HOM05D002231 ORTHO05D006103 6.2e-49 198.0 205 54.6
BolC7t42287H Brassica oleracea HOM05D002231 ORTHO05D006103 6.2e-49 198.0 204 56.4
TWI18G1086 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 6.2e-49 198.0 189 62.4
Lsat_1_v5_gn_3_31041 Lactuca sativa HOM05D002231 ORTHO05D006103 8.1e-49 197.6 206 53.4
Aa31LG7G9850 Aethionema arabicum HOM05D002231 ORTHO05D006103 1.4e-48 196.8 205 56.1
AT1G27385 Arabidopsis thaliana HOM05D002231 ORTHO05D006103 2.4e-48 196.1 202 55.9
Solyc04g045580.4 Solanum lycopersicum HOM05D002231 ORTHO05D006103 2.4e-48 196.1 183 62.8
unitig_747.g21125 Utricularia gibba HOM05D002231 ORTHO05D006103 3.1e-48 195.7 141 75.2
Sp1g23610 Schrenkiella parvula HOM05D002231 ORTHO05D006103 5.3e-48 194.9 204 55.4
A07p11870 Brassica napus HOM05D002231 ORTHO05D006103 6.9e-48 194.5 203 55.2
A09p38550 Brassica napus HOM05D002231 ORTHO05D006103 6.9e-48 194.5 206 55.3
Lalb_Chr08g0230621 Lupinus albus HOM05D002231 ORTHO05D006103 9.0e-48 194.1 136 75.0
TAR629G1028 Trochodendron aralioides HOM05D002231 ORTHO05D006103 9.0e-48 194.1 182 61.5
Atru.chr11.2328 Acer truncatum HOM05D002231 ORTHO05D006103 2.0e-47 193.0 196 60.2
BraA09t39361Z Brassica rapa HOM05D002231 ORTHO05D006103 2.6e-47 192.6 204 54.9
ECA234G2919 Erigeron canadensis HOM05D002231 ORTHO05D006103 2.2e-46 189.5 130 76.2
SalBow1G3407 Salvia bowleyana HOM05D002231 ORTHO05D006103 2.2e-46 189.5 282 46.8
MELO3C011862.2 Cucumis melo HOM05D002231 ORTHO05D006103 5.5e-45 184.9 140 70.7
vmacro01059 Vaccinium macrocarpon HOM05D002231 ORTHO05D006103 1.6e-44 183.3 137 70.8
Glyma.08G104500 Glycine max HOM05D002231 ORTHO05D006103 4.6e-44 181.8 195 55.9
FvH4_4g23720 Fragaria vesca HOM05D002231 ORTHO05D006103 1.0e-43 180.6 184 59.8
Phvul.L002246 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 1.0e-43 180.6 199 55.3
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 2.3e-43 179.5 182 59.9
ClCG11G013620 Citrullus lanatus HOM05D002231 ORTHO05D006103 1.5e-42 176.8 159 64.2
Cpa.g.sc808.1 Carica papaya HOM05D002231 ORTHO05D006103 1.9e-42 176.4 120 76.7
Os04g0386500 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 1.9e-42 176.4 144 66.0
Ca_16456_v3 Cicer arietinum L. HOM05D002231 ORTHO05D006103 4.3e-42 175.3 185 57.3
SalBow8G1223 Salvia bowleyana HOM05D002231 ORTHO05D006103 5.6e-42 174.9 208 55.3
HanXRQChr06g0174651 Helianthus annuus HOM05D002231 ORTHO05D006103 7.4e-42 174.5 208 47.6
Lj3C1069T6 Lonicera japonica HOM05D002231 ORTHO05D006103 1.3e-41 173.7 200 56.5
Zm00001eb421060 Zea mays HOM05D002231 ORTHO05D006103 1.3e-41 173.7 198 56.1
ECA246G2515 Erigeron canadensis HOM05D002231 ORTHO05D006103 8.2e-41 171.0 196 49.5
Lj4g0021495 Lotus japonicus HOM05D002231 ORTHO05D006103 1.8e-40 169.9 214 51.4
Os02g0507400 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 2.4e-40 169.5 133 63.9
HanXRQChr12g0385441 Helianthus annuus HOM05D002231 ORTHO05D006103 4.0e-40 168.7 199 53.8
BcaC05g26745 Brassica carinata HOM05D002231 ORTHO05D006103 2.6e-39 166.0 187 52.4
MBI11_g05330_MAGBIO Magnolia biondii HOM05D002231 ORTHO05D006103 1.3e-38 163.7 186 57.0
BcaC05g26552 Brassica carinata HOM05D002231 ORTHO05D006103 2.9e-38 162.5 187 50.8
BcaB03g13989 Brassica carinata HOM05D002231 ORTHO05D006103 4.9e-38 161.8 185 51.4
Duzib248G1458 Durio zibethinus HOM05D002231 ORTHO05D006103 1.1e-37 160.6 217 49.8
SMO246G0027 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 4.6e-36 155.2 130 63.1
arahy.Tifrunner.gnm1.ann1.1IJF7J Arachis hypogaea HOM05D002231 ORTHO05D006103 1.8e-35 153.3 182 51.6
SMO364G0411 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 1.8e-35 153.3 133 63.2
Nn4g22308 Nelumbo nucifera HOM05D002231 ORTHO05D006103 5.1e-35 151.8 179 54.7
Zm00001eb085510 Zea mays HOM05D002231 ORTHO05D006103 3.3e-34 149.1 191 49.7
arahy.Tifrunner.gnm1.ann1.RN2E3G Arachis hypogaea HOM05D002231 ORTHO05D006103 3.7e-33 145.6 129 63.6
DCAR_007004 Daucus carota HOM05D002231 ORTHO05D006103 8.2e-33 144.4 116 70.7
Pp3c15_19360 Physcomitrium patens HOM05D002231 ORTHO05D006103 8.2e-33 144.4 140 59.3
AagrBONN_evm.TU.Sc2ySwM_368.423 Anthoceros agrestis HOM05D002231 ORTHO05D006103 1.1e-32 144.1 140 57.9
Haze_12423 Corylus avellana HOM05D002231 ORTHO05D006103 1.1e-32 144.1 160 56.9
SalBow2G1775 Salvia bowleyana HOM05D002231 ORTHO05D006103 1.8e-32 143.3 161 56.5
HanXRQChr08g0207851 Helianthus annuus HOM05D002231 ORTHO05D006103 2.4e-32 142.9 200 48.5
ECA233G1565 Erigeron canadensis HOM05D002231 ORTHO05D006103 3.1e-32 142.5 142 56.3
CBR_g57027 Chara braunii HOM05D002231 ORTHO05D006103 1.2e-31 140.6 133 55.6
COL.COLO4_20407 Corchorus olitorius HOM05D002231 ORTHO05D006103 1.7e-30 136.7 170 51.8
Pp3c9_19480 Physcomitrium patens HOM05D002231 ORTHO05D006103 2.9e-30 136.0 139 56.1
Oeu049136.1 Olea europaea HOM05D002231 ORTHO05D006103 1.1e-29 134.0 189 47.1
Oeu029193.1 Olea europaea HOM05D002231 ORTHO05D006103 1.4e-29 133.7 163 52.8
ATR0059G025 Amborella trichopoda HOM05D002231 ORTHO05D006103 1.1e-26 124.0 100 68.0
Nitab4.5_0000155g0190 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.9e-26 123.2 159 52.8
Nitab4.5_0004003g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 2.2e-25 119.8 156 52.6
DCAR_026462 Daucus carota HOM05D002231 ORTHO05D006103 1.2e-23 114.0 193 46.1
RcHm_v2.0_Chr3g0491761 Rosa chinensis HOM05D002231 ORTHO05D006103 2.9e-22 109.4 62 88.7
PRCOL_00004939 Prasinoderma coloniale HOM05D002231 ORTHO05D006103 4.7e-20 102.1 130 43.8
Lsat_1_v5_gn_4_56001 Lactuca sativa HOM05D002231 ORTHO05D006103 1.1e-18 97.4 143 43.4
Cre12.g508300 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 7.7e-15 84.7 85 54.1
Cre02.g074700 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 3.6e-12 75.9 136 36.0
CDE05G2241 Ceratophyllum demersum HOM05D001859 ORTHO05D001836 2.6e-10 69.7 49 67.3
MCO02G005 Micromonas commoda HOM05D003605 ORTHO05D004292 4.4e-10 68.9 116 35.3
TAR383G1026 Trochodendron aralioides HOM05D002231 ORTHO05D006103 9.7e-10 67.8 51 76.5


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