Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g130700 Amaranthus hybridus HOM05D018761 ORTHO05D019517 4.7e-94 347.8 173 100.0
EL10Ac6g13478 Beta vulgaris HOM05D018761 ORTHO05D019517 1.3e-54 216.9 176 67.0
AUR62005597 Chenopodium quinoa HOM05D018761 ORTHO05D019517 9.3e-50 200.7 180 62.2
Ah.03g136260 Amaranthus hybridus HOM05D018761 ORTHO05D019517 3.9e-32 142.1 116 71.6
Hund25454 Selenicereus undatus HOM05D018761 ORTHO05D019517 1.9e-26 123.2 192 47.9
AUR62024130 Chenopodium quinoa HOM05D018761 ORTHO05D019517 1.4e-21 107.1 76 72.4
Sc11g0000520 Simmondsia chinensis HOM05D018761 ORTHO05D019517 1.3e-11 73.9 190 35.8
Migut.F00077 Erythranthe guttata HOM05D002631 ORTHO05D002861 6.1e-09 65.1 187 32.1
Migut.K01455 Erythranthe guttata HOM05D002631 ORTHO05D002861 6.1e-09 65.1 174 32.8
Manes.15G159300 Manihot esculenta HOM05D002631 ORTHO05D002861 8.0e-09 64.7 176 30.7
PGR102G0668 Punica granatum HOM05D002631 ORTHO05D002861 2.3e-08 63.2 156 32.1
Peaxi162Scf00700g00133 Petunia axillaris HOM05D002631 ORTHO05D002861 3.0e-08 62.8 203 32.5
Cc07_g00670 Coffea canephora HOM05D002631 ORTHO05D002861 4.0e-08 62.4 206 31.6
Nn3g16504 Nelumbo nucifera HOM05D002631 ORTHO05D002861 5.2e-08 62.0 217 31.8
Nitab4.5_0000559g0430 Nicotiana tabacum HOM05D002631 ORTHO05D002861 5.2e-08 62.0 109 41.3
Oeu013645.3 Olea europaea HOM05D000172 ORTHO05D000781 6.8e-08 61.6 184 30.4
Ca_04425_v3 Cicer arietinum L. HOM05D002631 ORTHO05D002861 1.2e-07 60.8 177 31.1
TAR371G1118 Trochodendron aralioides HOM05D002631 ORTHO05D002861 2.0e-07 60.1 214 30.4
Sed0025656 Sechium edule HOM05D002631 ORTHO05D002861 3.4e-07 59.3 136 36.0
Sed0001821 Sechium edule HOM05D002631 ORTHO05D002861 4.4e-07 58.9 165 31.5
Sed0018875 Sechium edule HOM05D002631 ORTHO05D002861 4.4e-07 58.9 163 30.1
PGSC0003DMG400013426 Solanum tuberosum HOM05D002631 ORTHO05D002861 4.4e-07 58.9 169 32.5
SalBow4G2864 Salvia bowleyana HOM05D002631 ORTHO05D002861 5.7e-07 58.5 165 30.9
Solyc03g005030.3 Solanum lycopersicum HOM05D002631 ORTHO05D002861 5.7e-07 58.5 164 32.3
TPR.G38258 Trifolium pratense HOM05D002631 ORTHO05D002861 5.7e-07 58.5 187 30.5
SalBow4G0924 Salvia bowleyana HOM05D002631 ORTHO05D002861 7.5e-07 58.2 165 30.9
TPR.G7520 Trifolium pratense HOM05D002631 ORTHO05D002861 7.5e-07 58.2 163 28.8
Psat1g085600 Pisum sativum HOM05D002631 ORTHO05D002861 9.8e-07 57.8 162 30.2
MSTRG.3262 Avicennia marina HOM05D002631 ORTHO05D002861 1.3e-06 57.4 197 30.5
CAN.G1751.2 Capsicum annuum HOM05D002631 ORTHO05D002861 1.3e-06 57.4 188 28.2
CsaV3_3G027170 Cucumis sativus L. HOM05D002631 ORTHO05D002861 1.3e-06 57.4 160 30.6
unitig_21.g20478 Utricularia gibba HOM05D001287 ORTHO05D001226 2.2e-06 56.6 164 31.1
GSVIVG01010390001 Vitis vinifera HOM05D002631 ORTHO05D002861 2.2e-06 56.6 200 31.5
RcHm_v2.0_Chr2g0175231 Rosa chinensis HOM05D002631 ORTHO05D002861 2.8e-06 56.2 79 45.6
Sopen03g001040 Solanum pennellii HOM05D002631 ORTHO05D002861 2.8e-06 56.2 160 31.2
ClCG05G013370 Citrullus lanatus HOM05D002631 ORTHO05D002861 4.9e-06 55.5 213 28.2
Peaxi162Scf00166g00728 Petunia axillaris HOM05D002631 ORTHO05D002861 4.9e-06 55.5 213 31.0
TWI56G0933 Tripterygium wilfordii HOM05D002631 ORTHO05D002861 4.9e-06 55.5 134 33.6
COL.COLO4_20357 Corchorus olitorius HOM05D002631 ORTHO05D002861 6.3e-06 55.1 170 32.4
Eucgr.B03472 Eucalyptus grandis HOM05D002631 ORTHO05D002861 6.3e-06 55.1 182 31.9
Prupe.3G303900 Prunus persica HOM05D002631 ORTHO05D002861 6.3e-06 55.1 154 33.1
SGA_v2.0_scaffold44G16907 Striga asiatica HOM05D002631 ORTHO05D002861 6.3e-06 55.1 138 31.9
Aqoxy5G03422 Aquilegia oxysepala HOM05D002631 ORTHO05D002861 8.3e-06 54.7 213 26.3
MSTRG.3083 Avicennia marina HOM05D002631 ORTHO05D002861 8.3e-06 54.7 62 48.4
Lj2g0026031 Lotus japonicus HOM05D002631 ORTHO05D002861 8.3e-06 54.7 31 80.6
Nitab4.5_0005161g0010 Nicotiana tabacum HOM05D002631 ORTHO05D002861 8.3e-06 54.7 109 39.4
VMungo0464G1570 Vigna mungo HOM05D002631 ORTHO05D002861 8.3e-06 54.7 31 80.6


User provided reference genes

Program Settings