Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 3.6e-130 468.4 257 100.0
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 2.9e-39 166.4 134 67.9
Ah.03g133970 Amaranthus hybridus HOM05D006937 ORTHO05D008747 3.2e-38 162.9 156 64.7
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 3.5e-37 159.5 134 66.4
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 6.7e-36 155.2 144 61.1
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 2.1e-34 150.2 131 64.1
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 3.1e-33 146.4 144 55.6
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 4.1e-33 146.0 143 55.9
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 5.3e-33 145.6 162 51.9
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 9.0e-33 144.8 143 55.9
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 2.0e-32 143.7 143 52.4
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 2.6e-32 143.3 143 53.8
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 2.6e-32 143.3 139 56.1
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 3.4e-32 142.9 142 54.9
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 3.4e-32 142.9 143 54.5
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 3.4e-32 142.9 143 54.5
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 3.4e-32 142.9 142 54.9
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 4.5e-32 142.5 141 56.0
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 5.9e-32 142.1 143 53.1
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 5.9e-32 142.1 133 57.1
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 5.9e-32 142.1 133 59.4
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 1.0e-31 141.4 143 55.2
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 1.3e-31 141.0 143 53.8
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 1.3e-31 141.0 143 53.8
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 1.3e-31 141.0 143 55.2
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 1.3e-31 141.0 138 55.1
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 1.7e-31 140.6 143 53.1
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 2.9e-31 139.8 143 53.8
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 2.9e-31 139.8 143 53.8
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 2.9e-31 139.8 143 53.8
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 2.9e-31 139.8 138 55.1
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 3.8e-31 139.4 143 54.5
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 5.0e-31 139.0 143 51.0
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 5.0e-31 139.0 152 51.3
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 6.5e-31 138.7 142 53.5
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 6.5e-31 138.7 142 53.5
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 6.5e-31 138.7 143 53.1
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 8.5e-31 138.3 149 52.3
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 1.1e-30 137.9 143 53.8
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 1.1e-30 137.9 143 53.8
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 1.1e-30 137.9 130 56.2
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 1.9e-30 137.1 143 51.0
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 1.9e-30 137.1 143 53.1
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 1.9e-30 137.1 143 52.4
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 3.2e-30 136.3 149 52.3
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 4.2e-30 136.0 143 54.5
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 4.2e-30 136.0 141 53.9
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 4.2e-30 136.0 137 53.3
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 4.2e-30 136.0 143 51.7
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 4.2e-30 136.0 143 52.4
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 4.2e-30 136.0 143 53.1
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 5.5e-30 135.6 143 51.0
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 5.5e-30 135.6 143 51.7
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 9.3e-30 134.8 142 52.8
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 9.3e-30 134.8 143 51.7
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 9.3e-30 134.8 143 51.7
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 1.2e-29 134.4 142 51.4
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 1.6e-29 134.0 143 51.0
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 2.1e-29 133.7 143 50.3
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 2.1e-29 133.7 137 53.3
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 2.7e-29 133.3 143 50.3
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 3.6e-29 132.9 141 51.1
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 4.6e-29 132.5 140 51.4
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 4.6e-29 132.5 143 50.3
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 6.1e-29 132.1 140 52.1
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 1.0e-28 131.3 152 47.4
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 1.8e-28 130.6 148 50.0
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 8.7e-28 128.3 139 50.4
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 1.1e-27 127.9 142 50.0
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 1.1e-27 127.9 143 47.6
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 1.1e-27 127.9 137 50.4
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 1.5e-27 127.5 143 49.7
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 1.9e-27 127.1 143 52.4
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 5.7e-27 125.6 131 54.2
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 6.3e-26 122.1 132 52.3
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 8.2e-26 121.7 68 83.8
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 1.8e-25 120.6 143 48.3
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 4.1e-25 119.4 150 46.7
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 9.1e-25 118.2 71 77.5
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 3.4e-24 116.3 115 53.9
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 7.7e-24 115.2 143 42.7
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 1.7e-23 114.0 129 49.6
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 5.0e-23 112.5 124 54.0
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 5.5e-22 109.0 130 46.2
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 3.6e-21 106.3 148 42.6
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 1.0e-20 104.8 156 40.4
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 1.8e-20 104.0 143 42.7
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 6.7e-20 102.1 104 54.8
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 2.0e-19 100.5 111 52.3
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 7.4e-19 98.6 106 50.0
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 1.7e-18 97.4 71 69.0
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 6.3e-18 95.5 136 41.9
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 8.2e-18 95.1 138 38.4
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 1.1e-17 94.7 137 41.6
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 2.0e-16 90.5 144 37.5
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 4.5e-16 89.4 111 45.9
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 1.0e-15 88.2 71 59.2
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 2.2e-15 87.0 71 57.7
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 3.8e-15 86.3 71 57.7
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 3.8e-15 86.3 71 59.2
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 6.5e-15 85.5 71 59.2
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 8.5e-15 85.1 71 59.2
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 1.1e-14 84.7 71 57.7
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 1.1e-14 84.7 71 57.7
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 1.1e-14 84.7 71 57.7
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 1.4e-14 84.3 71 57.7
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 1.9e-14 84.0 69 58.0
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 7.2e-14 82.0 71 57.7
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 1.6e-13 80.9 71 56.3
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 1.6e-13 80.9 71 56.3
Sabra10G0124400 Salix brachista HOM05D006937 ORTHO05D008747 6.1e-13 79.0 85 51.8
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 6.7e-12 75.5 112 37.5
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 2.8e-10 70.1 39 79.5
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 6.3e-10 68.9 49 65.3
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 4.1e-09 66.2 39 76.9
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 1.6e-08 64.3 41 65.9
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 2.6e-08 63.5 41 65.9
Cpa.g.sc1.69 Carica papaya HOM05D006937 ORTHO05D008747 1.9e-06 57.4 36 72.2
Potri.010G163600 Populus trichocarpa HOM05D006937 ORTHO05D008747 7.2e-06 55.5 114 34.2


User provided reference genes

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