Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 1.1e-286 989.2 481 100.0
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 6.4e-173 611.3 448 69.9
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 1.1e-156 557.4 501 59.3
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.5e-142 510.4 490 53.3
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 2.0e-142 510.0 426 57.5
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 4.5e-142 508.8 431 57.5
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 2.9e-141 506.1 429 58.7
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 6.4e-141 505.0 433 58.7
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 1.1e-140 504.2 436 59.4
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 1.4e-140 503.8 472 55.5
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 1.9e-140 503.4 421 58.7
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 1.9e-140 503.4 423 58.2
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 2.7e-139 499.6 423 57.7
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 2.7e-139 499.6 461 54.2
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.6e-139 498.8 462 54.1
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 4.6e-139 498.8 435 56.6
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 1.3e-138 497.3 431 57.1
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.8e-138 496.9 426 58.5
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 3.9e-138 495.7 438 57.1
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 8.7e-138 494.6 439 57.4
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 8.7e-138 494.6 407 59.0
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 1.5e-137 493.8 423 57.0
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 9.6e-137 491.1 376 62.5
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 8.1e-136 488.0 419 58.0
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 1.8e-135 486.9 493 50.3
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 1.8e-135 486.9 426 58.2
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 3.1e-135 486.1 395 60.3
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 5.3e-135 485.3 428 56.3
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 6.9e-135 485.0 406 57.6
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 6.9e-135 485.0 406 57.6
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 5.8e-134 481.9 451 55.4
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 5.8e-134 481.9 416 56.5
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.3e-133 480.7 395 60.0
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 3.8e-133 479.2 427 55.0
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 3.8e-133 479.2 433 56.6
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 8.4e-133 478.0 427 56.4
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 1.1e-132 477.6 422 56.6
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 4.2e-132 475.7 401 56.4
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 4.6e-131 472.2 387 57.6
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 6.0e-131 471.9 437 54.2
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 1.0e-130 471.1 431 54.1
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 1.3e-130 470.7 431 54.1
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 1.3e-130 470.7 371 59.8
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 1.8e-130 470.3 432 54.4
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 1.8e-130 470.3 376 59.0
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 3.0e-130 469.5 377 59.9
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 3.9e-130 469.2 373 59.0
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 5.1e-130 468.8 430 54.0
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 8.7e-130 468.0 498 49.6
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 8.7e-130 468.0 377 58.9
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 1.1e-129 467.6 439 53.1
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 2.5e-129 466.5 407 57.5
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 2.5e-129 466.5 405 57.8
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 9.6e-129 464.5 392 58.2
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 1.6e-128 463.8 386 57.0
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 2.1e-128 463.4 430 55.1
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.8e-128 463.0 407 57.2
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.8e-128 462.2 393 58.0
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.8e-128 462.2 404 57.9
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 4.8e-128 462.2 437 52.4
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 4.8e-128 462.2 416 55.8
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 8.2e-128 461.5 371 58.5
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 1.4e-127 460.7 382 57.3
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 2.4e-127 459.9 431 53.1
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 4.0e-127 459.1 416 55.3
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 9.0e-127 458.0 426 52.8
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 7.6e-126 454.9 469 50.3
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 7.6e-126 454.9 416 54.8
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 1.0e-125 454.5 408 55.6
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 2.9e-125 453.0 426 53.8
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 8.4e-125 451.4 408 55.4
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 1.4e-124 450.7 405 56.5
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 1.9e-124 450.3 403 54.3
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 4.2e-124 449.1 374 58.3
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 4.2e-124 449.1 449 52.3
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 1.6e-123 447.2 399 55.4
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 2.1e-123 446.8 409 54.8
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 1.0e-122 444.5 422 52.4
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 1.8e-122 443.7 397 55.2
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 3.9e-122 442.6 445 51.0
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 5.1e-122 442.2 398 54.5
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 1.5e-121 440.7 425 53.6
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 4.3e-121 439.1 433 52.9
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 7.4e-121 438.3 384 57.3
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 7.4e-121 438.3 431 52.0
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 1.6e-120 437.2 411 54.5
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 2.2e-120 436.8 398 54.3
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 3.7e-120 436.0 457 52.1
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 3.7e-120 436.0 395 52.4
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 3.1e-119 433.0 424 53.5
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 3.1e-119 433.0 389 56.0
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 3.1e-119 433.0 389 56.0
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 3.1e-119 433.0 389 56.0
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 1.4e-116 424.1 379 55.7
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 7.9e-115 418.3 426 48.8
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 2.2e-112 410.2 421 51.5
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.0e-109 401.4 356 54.5
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.9e-108 397.1 412 49.3
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 5.9e-102 375.6 361 48.5
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 9.1e-95 351.7 239 70.3
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.7e-91 340.1 418 43.8
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 1.9e-76 290.8 346 44.8
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 5.6e-76 289.3 336 46.7
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 9.8e-73 278.5 278 52.5
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 1.6e-70 271.2 210 60.0
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 4.6e-70 269.6 230 57.8
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 3.9e-69 266.5 385 39.0
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 2.8e-59 233.8 410 36.1
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 9.5e-52 208.8 393 33.8
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 7.6e-49 199.1 294 38.4
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 1.1e-36 158.7 159 52.2
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 4.2e-31 140.2 373 31.9
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 1.1e-26 125.6 169 44.4
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 6.9e-26 122.9 363 30.6
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 4.5e-25 120.2 376 30.3
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 5.8e-25 119.8 111 54.1
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 7.6e-25 119.4 129 50.4
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.7e-24 118.2 401 28.2
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 6.4e-24 116.3 319 34.2
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 6.7e-21 106.3 249 33.7
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 1.5e-20 105.1 53 84.9
AagrBONN_evm.TU.Sc2ySwM_362.1561 Anthoceros agrestis HOM05D006399 ORTHO05D007988 1.1e-15 89.0 299 28.8
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 7.9e-06 56.2 75 40.0


User provided reference genes

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