Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 1.3e-157 559.7 284 100.0
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 3.0e-122 442.2 268 81.0
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 1.5e-121 439.9 271 81.2
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 4.4e-121 438.3 271 80.4
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 1.3e-120 436.8 266 82.3
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 8.2e-120 434.1 265 81.9
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 1.4e-119 433.3 268 78.4
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 2.0e-118 429.5 271 79.3
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 2.6e-118 429.1 268 79.1
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 2.6e-118 429.1 268 79.1
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 7.7e-118 427.6 270 77.8
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 1.3e-117 426.8 262 79.8
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 2.2e-117 426.0 270 77.4
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 2.2e-117 426.0 260 80.8
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 2.9e-117 425.6 263 79.5
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 5.0e-117 424.9 279 75.6
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 8.5e-117 424.1 262 79.4
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 8.5e-117 424.1 277 76.5
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 1.1e-116 423.7 285 76.1
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 1.5e-116 423.3 289 72.3
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 4.2e-116 421.8 267 77.9
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 5.5e-116 421.4 277 75.8
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 7.2e-116 421.0 265 77.7
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 9.4e-116 420.6 250 80.0
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 9.4e-116 420.6 272 73.2
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 1.2e-115 420.2 270 78.1
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 1.6e-115 419.9 265 79.6
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 8.0e-115 417.5 274 75.5
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 1.2e-113 413.7 252 79.8
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 2.0e-113 412.9 253 81.4
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 2.6e-113 412.5 278 75.2
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 5.7e-113 411.4 264 76.9
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 2.8e-112 409.1 266 75.6
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 1.4e-111 406.8 284 71.1
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 1.8e-111 406.4 266 73.3
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 1.8e-111 406.4 277 73.6
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 2.4e-111 406.0 246 79.3
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 2.4e-111 406.0 252 79.8
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 4.1e-111 405.2 272 76.1
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 5.4e-111 404.8 265 72.8
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.2e-110 403.7 246 78.5
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 1.6e-110 403.3 269 75.5
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 2.0e-110 402.9 271 72.3
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 2.0e-110 402.9 274 73.7
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 2.7e-110 402.5 281 71.2
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 5.9e-110 401.4 244 78.3
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 1.0e-109 400.6 275 74.2
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 1.0e-109 400.6 269 73.2
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 1.3e-109 400.2 278 73.7
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 1.3e-109 400.2 278 73.7
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 2.9e-109 399.1 292 70.5
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 2.9e-109 399.1 246 77.6
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 8.5e-109 397.5 281 69.4
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 1.1e-108 397.1 269 75.5
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 3.2e-108 395.6 278 73.7
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 3.2e-108 395.6 278 73.7
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 3.2e-108 395.6 278 73.7
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 1.6e-107 393.3 269 71.4
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 3.6e-107 392.1 262 74.4
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 4.7e-107 391.7 276 70.7
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 8.0e-107 391.0 263 74.1
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 4.9e-104 381.7 301 67.4
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 6.3e-104 381.3 287 69.0
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 9.1e-103 377.5 227 79.7
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 2.7e-102 375.9 230 79.1
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 5.9e-102 374.8 267 72.7
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 1.1e-100 370.5 253 73.1
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.5e-100 370.2 264 70.1
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 6.1e-99 364.8 235 75.7
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 8.0e-99 364.4 240 75.4
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 5.7e-97 358.2 330 56.7
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 2.9e-96 355.9 214 82.7
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 1.1e-95 354.0 267 68.2
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 4.1e-95 352.1 219 79.0
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 1.2e-94 350.5 205 82.0
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 3.5e-94 349.0 194 85.1
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 3.0e-93 345.9 220 79.5
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 1.5e-92 343.6 272 63.6
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 7.3e-92 341.3 287 63.4
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 6.2e-91 338.2 231 73.6
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 5.2e-90 335.1 214 76.6
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 2.6e-89 332.8 218 72.9
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 2.9e-88 329.3 194 79.9
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 1.9e-87 326.6 265 63.0
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 1.2e-83 313.9 256 63.3
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 2.8e-83 312.8 264 58.7
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 4.6e-78 295.4 166 83.1
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 1.5e-76 290.4 265 55.8
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 2.8e-75 286.2 251 56.2
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 6.8e-74 281.6 181 72.9
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 2.4e-71 273.1 243 59.3
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 6.0e-70 268.5 257 54.1
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 3.3e-68 262.7 189 71.4
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 4.3e-68 262.3 207 65.2
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 2.2e-64 250.0 212 63.2
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 1.4e-63 247.3 235 54.9
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 7.1e-63 245.0 180 65.0
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 2.1e-62 243.4 284 49.3
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 1.1e-55 221.1 142 76.8
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 7.6e-49 198.4 127 75.6
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 1.6e-46 190.7 236 48.7
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 1.2e-33 147.9 93 78.5
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 1.4e-31 141.0 92 76.1
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 1.1e-26 124.8 104 59.6
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 2.2e-24 117.1 98 54.1
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 2.9e-24 116.7 86 68.6
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 1.2e-22 111.3 153 45.1
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-20 104.4 125 44.8
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 6.9e-18 95.5 98 49.0
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 9.1e-18 95.1 57 77.2
Oeu016657.1 Olea europaea HOM05D006925 ORTHO05D008830 3.4e-17 93.2 60 78.3
EL10Ac6g13953 Beta vulgaris HOM05D006925 ORTHO05D008830 1.1e-15 88.2 52 88.5
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 7.9e-14 82.0 215 30.7
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 8.8e-13 78.6 53 69.8
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 7.0e-10 68.9 41 73.2
MCO01G431 Micromonas commoda HOM05D006925 ORTHO05D008830 1.1e-07 61.6 293 24.2
vmacro01629 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 1.9e-07 60.8 51 62.7


User provided reference genes

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