Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g128470 Amaranthus hybridus HOM05D005661 ORTHO05D007997 4.9e-185 651.0 323 100.0
AUR62042241 Chenopodium quinoa HOM05D005661 ORTHO05D007997 2.2e-108 396.4 328 66.8
AUR62032486 Chenopodium quinoa HOM05D005661 ORTHO05D007997 5.7e-101 371.7 330 65.5
CAN.G1379.8 Capsicum annuum HOM05D005661 ORTHO05D007997 2.0e-93 346.7 315 62.2
EL10Ac6g13962 Beta vulgaris HOM05D005661 ORTHO05D007997 4.4e-93 345.5 307 65.5
Actinidia11729 Actinidia chinensis HOM05D005661 ORTHO05D007997 9.8e-93 344.4 265 69.8
Lsat_1_v5_gn_9_124861 Lactuca sativa HOM05D005661 ORTHO05D007997 2.8e-92 342.8 311 62.7
Dinv38445 Davidia involucrata HOM05D005661 ORTHO05D007997 1.4e-91 340.5 304 61.5
Oeu000159.1 Olea europaea HOM05D005661 ORTHO05D007997 7.0e-91 338.2 268 69.8
Ciclev10002035m.g Citrus clementina HOM05D005661 ORTHO05D007997 1.6e-90 337.0 303 61.7
CSS0021874 Camellia sinensis var. sinensis HOM05D005661 ORTHO05D007997 2.7e-90 336.3 284 65.8
Cfa004424 Carpinus fangiana HOM05D005661 ORTHO05D007997 2.7e-90 336.3 260 68.8
HanXRQChr05g0153021 Helianthus annuus HOM05D005661 ORTHO05D007997 3.5e-90 335.9 264 70.1
Rhsim11G0115300 Rhododendron simsii HOM05D005661 ORTHO05D007997 3.5e-90 335.9 245 73.5
Migut.B00706 Erythranthe guttata HOM05D005661 ORTHO05D007997 4.5e-90 335.5 265 67.9
GSVIVG01023131001 Vitis vinifera HOM05D005661 ORTHO05D007997 4.5e-90 335.5 279 64.5
Nitab4.5_0001085g0130 Nicotiana tabacum HOM05D005661 ORTHO05D007997 5.9e-90 335.1 320 59.7
ECA246G0516 Erigeron canadensis HOM05D005661 ORTHO05D007997 1.0e-89 334.3 268 68.7
Nn5g27134 Nelumbo nucifera HOM05D005661 ORTHO05D007997 1.0e-89 334.3 316 59.8
PGSC0003DMG401018218 Solanum tuberosum HOM05D005661 ORTHO05D007997 1.0e-89 334.3 304 61.8
Thecc.06G064100 Theobroma cacao HOM05D005661 ORTHO05D007997 1.0e-89 334.3 269 68.8
CsaV3_3G006740 Cucumis sativus L. HOM05D005661 ORTHO05D007997 1.3e-89 334.0 297 62.3
Gorai.010G134700 Gossypium raimondii HOM05D005661 ORTHO05D007997 2.3e-89 333.2 268 68.7
Potri.004G230200 Populus trichocarpa HOM05D005661 ORTHO05D007997 2.3e-89 333.2 299 61.9
Manes.14G146200 Manihot esculenta HOM05D005661 ORTHO05D007997 2.9e-89 332.8 262 69.5
Solyc01g102820.4 Solanum lycopersicum HOM05D005661 ORTHO05D007997 3.8e-89 332.4 304 61.8
Sopen01g045220 Solanum pennellii HOM05D005661 ORTHO05D007997 3.8e-89 332.4 304 61.8
Eucgr.I02806 Eucalyptus grandis HOM05D005661 ORTHO05D007997 6.5e-89 331.6 265 68.3
QL02p103676 Quercus lobata HOM05D005661 ORTHO05D007997 6.5e-89 331.6 269 66.2
Sc09g0007750 Simmondsia chinensis HOM05D005661 ORTHO05D007997 6.5e-89 331.6 297 60.6
Prupe.1G586600 Prunus persica HOM05D005661 ORTHO05D007997 1.5e-88 330.5 261 69.0
Nitab4.5_0006159g0030 Nicotiana tabacum HOM05D005661 ORTHO05D007997 1.9e-88 330.1 310 60.3
Gohir.D06G117100 Gossypium hirsutum HOM05D005661 ORTHO05D007997 2.5e-88 329.7 268 68.7
MD15G1444200 Malus domestica HOM05D005661 ORTHO05D007997 4.2e-88 328.9 277 65.7
MELO3C016431.2 Cucumis melo HOM05D005661 ORTHO05D007997 5.5e-88 328.6 244 69.7
PSO210G4998 Papaver somniferum HOM05D005661 ORTHO05D007997 5.5e-88 328.6 303 60.4
Aqoxy1G02010 Aquilegia oxysepala HOM05D005661 ORTHO05D007997 7.2e-88 328.2 265 65.7
Gohir.A06G112500 Gossypium hirsutum HOM05D005661 ORTHO05D007997 7.2e-88 328.2 320 59.7
FAN08G1685 Fragaria x ananassa HOM05D005661 ORTHO05D007997 9.5e-88 327.8 264 67.4
MD08G1249400 Malus domestica HOM05D005661 ORTHO05D007997 1.2e-87 327.4 251 70.1
PGR142G1782 Punica granatum HOM05D005661 ORTHO05D007997 1.6e-87 327.0 259 66.0
FAN04G2212 Fragaria x ananassa HOM05D005661 ORTHO05D007997 2.1e-87 326.6 247 70.0
MSTRG.20341 Avicennia marina HOM05D005661 ORTHO05D007997 2.8e-87 326.2 271 68.3
arahy.Tifrunner.gnm1.ann1.PPAS6H Arachis hypogaea HOM05D005661 ORTHO05D007997 3.6e-87 325.9 271 65.3
MSTRG.16459 Avicennia marina HOM05D005661 ORTHO05D007997 4.7e-87 325.5 264 67.8
CANSAT01G0358 Cannabis sativa HOM05D005661 ORTHO05D007997 4.7e-87 325.5 320 58.4
Manes.14G166900 Manihot esculenta HOM05D005661 ORTHO05D007997 8.0e-87 324.7 259 68.0
RcHm_v2.0_Chr7g0218881 Rosa chinensis HOM05D005661 ORTHO05D007997 8.0e-87 324.7 247 70.0
TPR.G5996 Trifolium pratense HOM05D005661 ORTHO05D007997 8.0e-87 324.7 263 65.0
FvH4_5g27480 Fragaria vesca HOM05D005661 ORTHO05D007997 1.8e-86 323.6 274 65.3
unitig_21.g20570 Utricularia gibba HOM05D005661 ORTHO05D007997 1.8e-86 323.6 262 67.2
TAR628G0241 Trochodendron aralioides HOM05D005661 ORTHO05D007997 2.3e-86 323.2 322 59.0
FAN13G1518 Fragaria x ananassa HOM05D005661 ORTHO05D007997 4.0e-86 322.4 271 64.9
HanXRQChr09g0249911 Helianthus annuus HOM05D005661 ORTHO05D007997 4.0e-86 322.4 242 71.1
Cc02_g23630 Coffea canephora HOM05D005661 ORTHO05D007997 8.9e-86 321.2 270 64.8
DCAR_031998 Daucus carota HOM05D005661 ORTHO05D007997 1.2e-85 320.9 304 58.2
DCAR_001732 Daucus carota HOM05D005661 ORTHO05D007997 1.7e-84 317.0 322 58.7
Peaxi162Scf00194g01045 Petunia axillaris HOM05D005661 ORTHO05D007997 1.7e-84 317.0 258 66.7
ATR1089G013 Amborella trichopoda HOM05D005661 ORTHO05D007997 4.9e-84 315.5 277 62.5
TWI23G0175 Tripterygium wilfordii HOM05D005661 ORTHO05D007997 4.9e-84 315.5 261 66.7
Psat0s2555g0200 Pisum sativum HOM05D005661 ORTHO05D007997 8.3e-84 314.7 300 59.0
THA.LOC104801778 Tarenaya hassleriana HOM05D005661 ORTHO05D007997 8.3e-84 314.7 324 55.9
Glyma.17G002400 Glycine max HOM05D005661 ORTHO05D007997 4.1e-83 312.4 253 64.0
VMungo1215G1111 Vigna mungo HOM05D005661 ORTHO05D007997 7.0e-83 311.6 257 63.4
AL5G11770 Arabidopsis lyrata HOM05D005661 ORTHO05D007997 1.7e-81 307.0 264 62.9
Carub.0005s0153 Capsella rubella HOM05D005661 ORTHO05D007997 1.7e-81 307.0 259 64.1
Sp2g13750 Schrenkiella parvula HOM05D005661 ORTHO05D007997 3.8e-81 305.8 333 55.0
AT2G02500 Arabidopsis thaliana HOM05D005661 ORTHO05D007997 8.6e-81 304.7 264 62.5
CARHR145060 Cardamine hirsuta HOM05D005661 ORTHO05D007997 8.6e-81 304.7 259 63.3
BcaC03g17145 Brassica carinata HOM05D005661 ORTHO05D007997 1.1e-80 304.3 265 62.6
BraA02t08315Z Brassica rapa HOM05D005661 ORTHO05D007997 1.9e-80 303.5 265 62.6
MBI06_g17067_MAGBIO Magnolia biondii HOM05D005661 ORTHO05D007997 1.9e-80 303.5 265 61.5
A02p32920 Brassica napus HOM05D005661 ORTHO05D007997 2.5e-80 303.1 319 55.8
BolC2t11148H Brassica oleracea HOM05D005661 ORTHO05D007997 2.5e-80 303.1 265 62.6
BcaB07g30331 Brassica carinata HOM05D005661 ORTHO05D007997 7.3e-80 301.6 337 53.7
Zm00001eb365960 Zea mays HOM05D005661 ORTHO05D007997 7.3e-80 301.6 254 63.0
C02p50650 Brassica napus HOM05D005661 ORTHO05D007997 1.2e-79 300.8 265 61.9
Sabra01G0175500 Salix brachista HOM05D005661 ORTHO05D007997 2.1e-79 300.1 372 49.7
SEGI_39309 Sequoiadendron giganteum HOM05D005661 ORTHO05D007997 2.1e-79 300.1 243 64.6
Aa31LG2G7610 Aethionema arabicum HOM05D005661 ORTHO05D007997 2.8e-79 299.7 284 58.5
Lj4g0018255 Lotus japonicus HOM05D005661 ORTHO05D007997 6.1e-79 298.5 261 60.9
COL.COLO4_31208 Corchorus olitorius HOM05D005661 ORTHO05D007997 1.8e-78 297.0 224 70.1
HPP92_003721 Vanilla planifolia HOM05D005661 ORTHO05D007997 1.8e-78 297.0 259 61.8
Thhalv10004647m.g Eutrema salsugineum HOM05D005661 ORTHO05D007997 2.3e-78 296.6 264 61.4
HPP92_003715 Vanilla planifolia HOM05D005661 ORTHO05D007997 3.0e-78 296.2 256 62.1
Phvul.003G090900 Phaseolus vulgaris HOM05D005661 ORTHO05D007997 8.9e-78 294.7 316 53.2
Medtr4g134540 Medicago truncatula HOM05D005661 ORTHO05D007997 3.4e-77 292.7 231 64.9
Haze_09964 Corylus avellana HOM05D005661 ORTHO05D007997 2.9e-76 289.7 262 61.1
Zm00001eb145390 Zea mays HOM05D005661 ORTHO05D007997 3.7e-76 289.3 299 55.2
Dinv29650 Davidia involucrata HOM05D005661 ORTHO05D007997 8.3e-76 288.1 224 67.9
Lalb_Chr07g0176831 Lupinus albus HOM05D005661 ORTHO05D007997 1.1e-75 287.7 232 65.9
ClCG10G007530 Citrullus lanatus HOM05D005661 ORTHO05D007997 2.4e-75 286.6 346 49.4
arahy.Tifrunner.gnm1.ann1.FQN863 Arachis hypogaea HOM05D005661 ORTHO05D007997 4.1e-75 285.8 258 62.8
Mapoly0006s0146 Marchantia polymorpha HOM05D005661 ORTHO05D007997 5.4e-75 285.4 259 60.6
SGA_v2.0_scaffold131G34439 Striga asiatica HOM05D005661 ORTHO05D007997 6.6e-73 278.5 306 55.2
CDE04G2298 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 1.8e-70 270.4 302 53.6
SMO367G1090 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 6.8e-70 268.5 243 58.4
Pp3c15_1010 Physcomitrium patens HOM05D005661 ORTHO05D007997 2.0e-69 266.9 240 59.6
Pp3c9_590 Physcomitrium patens HOM05D005661 ORTHO05D007997 2.6e-69 266.5 265 56.2
Cpa.g.sc173.2 Carica papaya HOM05D005661 ORTHO05D007997 4.4e-69 265.8 244 63.9
CDE02G0980 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 1.4e-67 260.8 311 50.8
Ca_13523_v3 Cicer arietinum L. HOM05D005661 ORTHO05D007997 1.9e-67 260.4 207 66.2
vmacro01624 Vaccinium macrocarpon HOM05D005661 ORTHO05D007997 7.0e-67 258.5 265 58.5
CiPaw.06G177000 Carya illinoinensis HOM05D005661 ORTHO05D007997 6.6e-65 251.9 231 59.3
Sed0000786 Sechium edule HOM05D005661 ORTHO05D007997 1.6e-63 247.3 218 60.1
MCO15G500 Micromonas commoda HOM05D005661 ORTHO05D007997 1.4e-62 244.2 243 56.4
Cre16.g679669 Chlamydomonas reinhardtii HOM05D005661 ORTHO05D007997 1.4e-59 234.2 262 51.1
Lj5A292T55 Lonicera japonica HOM05D005661 ORTHO05D007997 2.4e-54 216.9 224 59.4
Os01g0887100 Oryza sativa ssp. japonica HOM05D005661 ORTHO05D007997 5.8e-53 212.2 189 57.7
Actinidia00142 Actinidia chinensis HOM05D005661 ORTHO05D007997 2.4e-46 190.3 155 67.1
Atru.chr6.139 Acer truncatum HOM05D005661 ORTHO05D007997 3.1e-46 189.9 196 58.2
CBR_g214 Chara braunii HOM05D005661 ORTHO05D007997 4.3e-40 169.5 200 48.5
Lj5A292T53 Lonicera japonica HOM05D005661 ORTHO05D007997 4.3e-40 169.5 177 54.2
AagrBONN_evm.TU.Sc2ySwM_362.430 Anthoceros agrestis HOM05D005661 ORTHO05D007997 2.1e-39 167.2 178 51.7
AUR62030219 Chenopodium quinoa HOM05D005661 ORTHO05D007997 1.2e-37 161.4 177 56.5
arahy.Tifrunner.gnm1.ann1.H0NKK3 Arachis hypogaea HOM05D005661 ORTHO05D007997 2.4e-35 153.7 157 57.3
Hund15335 Selenicereus undatus HOM05D005661 ORTHO05D007997 1.8e-33 147.5 146 57.5
Ca_21047_v3 Cicer arietinum L. HOM05D005661 ORTHO05D147477 2.6e-29 133.7 257 38.9
HanXRQChr03g0069601 Helianthus annuus HOM05D005661 ORTHO05D007997 1.6e-26 124.4 98 68.4
AagrBONN_evm.TU.Sc2ySwM_362.419 Anthoceros agrestis HOM05D005661 ORTHO05D007997 2.6e-21 107.1 66 74.2
FAN08G1519 Fragaria x ananassa HOM05D005661 ORTHO05D210776 2.2e-20 104.0 123 53.7
FvH4_5g27493 Fragaria vesca HOM05D005661 ORTHO05D007997 6.0e-18 95.9 281 33.1
Ca_29126_v3 Cicer arietinum L. HOM05D005661 ORTHO05D148461 8.2e-15 85.5 244 28.7
SMO367G1054 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 5.3e-14 82.8 144 39.6
Haze_27119 Corylus avellana HOM05D005196 ORTHO05D006107 6.9e-14 82.4 251 27.9
FAN08G3692 Fragaria x ananassa HOM05D005661 ORTHO05D208506 1.5e-13 81.3 198 35.9
HanXRQChr14g0444001 Helianthus annuus HOM05D005661 ORTHO05D007997 2.9e-12 77.0 62 66.1
VMungo1364G0001 Vigna mungo HOM05D005661 ORTHO05D005421 1.1e-11 75.1 143 37.8
Lj5A292T54 Lonicera japonica HOM05D005661 ORTHO05D007997 2.5e-11 73.9 57 66.7
CAN.G242.16 Capsicum annuum HOM05D005661 ORTHO05D007997 7.2e-11 72.4 62 58.1
FAN08G0833 Fragaria x ananassa HOM05D005661 ORTHO05D203111 2.3e-09 67.4 77 55.8
Medtr4g129075 Medicago truncatula HOM05D005661 ORTHO05D266434 2.8e-07 60.5 56 50.0


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