Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g128310 Amaranthus hybridus HOM05D003667 ORTHO05D004397 1.0e-117 426.8 223 100.0
Hund10761 Selenicereus undatus HOM05D003667 ORTHO05D004397 2.3e-72 276.2 171 83.6
Sc01g0006150 Simmondsia chinensis HOM05D003667 ORTHO05D004397 4.7e-62 241.9 173 74.0
Hma1.2p1_0106F.1_g051140 Hydrangea macrophylla HOM05D003667 ORTHO05D004397 3.1e-61 239.2 176 72.2
AUR62008662 Chenopodium quinoa HOM05D003667 ORTHO05D004397 4.0e-61 238.8 154 81.8
Ciclev10022078m.g Citrus clementina HOM05D003667 ORTHO05D004397 6.8e-61 238.0 169 71.6
Thecc.05G244000 Theobroma cacao HOM05D003667 ORTHO05D004397 8.9e-61 237.7 170 72.9
CANSAT78G1932 Cannabis sativa HOM05D003667 ORTHO05D004397 1.5e-60 236.9 174 69.0
Actinidia06203 Actinidia chinensis HOM05D003667 ORTHO05D004397 2.0e-60 236.5 174 71.8
Dinv05568 Davidia involucrata HOM05D003667 ORTHO05D004397 3.4e-60 235.7 184 67.9
Lj2A112G40 Lonicera japonica HOM05D003667 ORTHO05D004397 4.4e-60 235.3 169 73.4
CSS0004374 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 1.3e-59 233.8 174 71.8
Manes.09G137700 Manihot esculenta HOM05D003667 ORTHO05D004397 1.3e-59 233.8 169 71.6
CSS0013214 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 2.2e-59 233.0 174 71.3
GSVIVG01029952001 Vitis vinifera HOM05D003667 ORTHO05D004397 2.9e-59 232.6 170 71.2
Actinidia07960 Actinidia chinensis HOM05D003667 ORTHO05D004397 4.9e-59 231.9 174 70.1
Sabra13G0056100 Salix brachista HOM05D003667 ORTHO05D004397 4.9e-59 231.9 171 69.0
Duzib106G0749 Durio zibethinus HOM05D003667 ORTHO05D004397 6.4e-59 231.5 170 70.6
Rhsim13G0206500 Rhododendron simsii HOM05D003667 ORTHO05D004397 6.4e-59 231.5 171 70.8
Gohir.D11G242600 Gossypium hirsutum HOM05D003667 ORTHO05D004397 1.1e-58 230.7 169 71.6
Gorai.007G256800 Gossypium raimondii HOM05D003667 ORTHO05D004397 1.1e-58 230.7 169 71.6
Gohir.A11G231200 Gossypium hirsutum HOM05D003667 ORTHO05D004397 1.4e-58 230.3 169 71.0
TWI38G1994 Tripterygium wilfordii HOM05D003667 ORTHO05D004397 1.9e-58 229.9 169 70.4
COL.COLO4_28620 Corchorus olitorius HOM05D003667 ORTHO05D004397 3.2e-58 229.2 170 70.6
Potri.013G062900 Populus trichocarpa HOM05D003667 ORTHO05D004397 5.4e-58 228.4 170 68.8
CsaV3_4G012110 Cucumis sativus L. HOM05D003667 ORTHO05D004397 9.2e-58 227.6 171 69.6
Eucgr.K01520 Eucalyptus grandis HOM05D003667 ORTHO05D004397 2.0e-57 226.5 178 68.0
ClCG04G005470 Citrullus lanatus HOM05D003667 ORTHO05D004397 2.7e-57 226.1 171 68.4
EL10Ac7g17477 Beta vulgaris HOM05D003667 ORTHO05D004397 3.5e-57 225.7 147 81.0
FAN21G0540 Fragaria x ananassa HOM05D003667 ORTHO05D004397 6.0e-57 224.9 176 68.8
Atru.chr2.1481 Acer truncatum HOM05D003667 ORTHO05D004397 7.8e-57 224.6 168 67.3
FAN25G1089 Fragaria x ananassa HOM05D003667 ORTHO05D004397 1.3e-56 223.8 176 68.2
MELO3C008823.2 Cucumis melo HOM05D003667 ORTHO05D004397 1.7e-56 223.4 171 67.8
FvH4_3g25040 Fragaria vesca HOM05D003667 ORTHO05D004397 1.7e-56 223.4 176 68.2
PSO170G5262 Papaver somniferum HOM05D003667 ORTHO05D004397 2.3e-56 223.0 169 68.0
TAR623G0153 Trochodendron aralioides HOM05D003667 ORTHO05D004397 2.3e-56 223.0 169 69.8
FAN11G0144 Fragaria x ananassa HOM05D003667 ORTHO05D004397 3.9e-56 222.2 176 67.6
Nn7g37255 Nelumbo nucifera HOM05D003667 ORTHO05D004397 6.6e-56 221.5 168 70.2
Nn6g34578 Nelumbo nucifera HOM05D003667 ORTHO05D004397 8.6e-56 221.1 169 69.8
PSO357G0141 Papaver somniferum HOM05D003667 ORTHO05D004397 1.1e-55 220.7 169 68.0
RcHm_v2.0_Chr5g0045181 Rosa chinensis HOM05D003667 ORTHO05D004397 1.1e-55 220.7 176 66.5
MBI05_g12099_MAGBIO Magnolia biondii HOM05D003667 ORTHO05D004397 1.9e-55 219.9 172 66.9
Aqoxy1G00535 Aquilegia oxysepala HOM05D003667 ORTHO05D004397 4.3e-55 218.8 176 67.6
PSO541G6155 Papaver somniferum HOM05D003667 ORTHO05D004397 1.6e-54 216.9 166 67.5
MBI17_g12494_MAGBIO Magnolia biondii HOM05D003667 ORTHO05D004397 3.6e-54 215.7 171 64.9
PSO675G2224 Papaver somniferum HOM05D003667 ORTHO05D004397 6.2e-54 214.9 166 68.1
Oeu035461.1 Olea europaea HOM05D003667 ORTHO05D004397 8.1e-54 214.5 184 63.0
Sed0010728 Sechium edule HOM05D003667 ORTHO05D004397 1.1e-53 214.2 170 65.9
TWI38G1198 Tripterygium wilfordii HOM05D003667 ORTHO05D004397 1.1e-53 214.2 176 65.3
ClCG02G007830 Citrullus lanatus HOM05D003667 ORTHO05D004397 3.1e-53 212.6 170 64.7
Sopen07g024170 Solanum pennellii HOM05D003667 ORTHO05D004397 1.2e-52 210.7 179 64.8
Solyc07g047720.3 Solanum lycopersicum HOM05D003667 ORTHO05D004397 2.0e-52 209.9 181 64.1
PGSC0003DMG400018832 Solanum tuberosum HOM05D003667 ORTHO05D004397 2.0e-52 209.9 184 61.4
PGSC0003DMG400006127 Solanum tuberosum HOM05D003667 ORTHO05D004397 3.4e-52 209.1 188 62.2
Carub.0004s1876 Capsella rubella HOM05D003667 ORTHO05D004397 4.4e-52 208.8 176 61.4
Medtr3g450200 Medicago truncatula HOM05D003667 ORTHO05D004397 5.8e-52 208.4 174 64.4
Prupe.2G153200 Prunus persica HOM05D003667 ORTHO05D004397 5.8e-52 208.4 169 63.9
AL4G33130 Arabidopsis lyrata HOM05D003667 ORTHO05D004397 1.3e-51 207.2 176 60.8
CAN.G992.19 Capsicum annuum HOM05D003667 ORTHO05D004397 1.7e-51 206.8 182 63.2
CARHR131380 Cardamine hirsuta HOM05D003667 ORTHO05D004397 3.7e-51 205.7 176 60.2
CDE10G1021 Ceratophyllum demersum HOM05D003667 ORTHO05D004397 3.7e-51 205.7 169 66.3
HanXRQChr07g0197181 Helianthus annuus HOM05D003667 ORTHO05D004397 3.7e-51 205.7 169 62.7
Nitab4.5_0001774g0040 Nicotiana tabacum HOM05D003667 ORTHO05D004397 4.9e-51 205.3 194 60.8
THA.LOC104823778 Tarenaya hassleriana HOM05D003667 ORTHO05D004397 4.9e-51 205.3 175 63.4
MD02G1195300 Malus domestica HOM05D003667 ORTHO05D004397 1.1e-50 204.1 169 60.9
Ca_13917_v3 Cicer arietinum L. HOM05D003667 ORTHO05D004397 1.4e-50 203.8 173 63.0
Psat5g209680 Pisum sativum HOM05D003667 ORTHO05D004397 1.4e-50 203.8 174 62.6
AT2G36900 Arabidopsis thaliana HOM05D003667 ORTHO05D004397 1.9e-50 203.4 176 60.8
Migut.L01870 Erythranthe guttata HOM05D003667 ORTHO05D004397 2.4e-50 203.0 181 62.4
Sed0016620 Sechium edule HOM05D003667 ORTHO05D004397 3.2e-50 202.6 168 63.7
Phvul.006G027100 Phaseolus vulgaris HOM05D003667 ORTHO05D004397 5.4e-50 201.8 170 61.2
arahy.Tifrunner.gnm1.ann1.FV18MX Arachis hypogaea HOM05D003667 ORTHO05D004397 9.2e-50 201.1 170 64.7
arahy.Tifrunner.gnm1.ann1.7QGR70 Arachis hypogaea HOM05D003667 ORTHO05D004397 2.1e-49 199.9 170 64.1
MSTRG.26557 Avicennia marina HOM05D003667 ORTHO05D004397 2.1e-49 199.9 188 59.0
Cc03_g11050 Coffea canephora HOM05D003667 ORTHO05D004397 2.7e-49 199.5 170 64.7
arahy.Tifrunner.gnm1.ann1.VNW58P Arachis hypogaea HOM05D003667 ORTHO05D004397 3.5e-49 199.1 170 64.1
Nitab4.5_0001741g0020 Nicotiana tabacum HOM05D003667 ORTHO05D004397 3.5e-49 199.1 177 62.7
C04p11070 Brassica napus HOM05D003667 ORTHO05D004397 4.6e-49 198.7 176 58.5
BolC4t22755H Brassica oleracea HOM05D003667 ORTHO05D004397 4.6e-49 198.7 176 58.5
CiPaw.03G011100 Carya illinoinensis HOM05D003667 ORTHO05D004397 6.0e-49 198.4 175 63.4
Glyma.08G304700 Glycine max HOM05D003667 ORTHO05D004397 7.8e-49 198.0 173 60.7
TPR.G8769 Trifolium pratense HOM05D003667 ORTHO05D004397 7.8e-49 198.0 170 62.4
VMungo0540G2144 Vigna mungo HOM05D003667 ORTHO05D004397 7.8e-49 198.0 170 60.0
Aa31LG6G14320 Aethionema arabicum HOM05D003667 ORTHO05D004397 1.0e-48 197.6 177 58.2
BraA05t19858Z Brassica rapa HOM05D003667 ORTHO05D004397 1.0e-48 197.6 176 58.0
A05p08960 Brassica napus HOM05D003667 ORTHO05D004397 1.3e-48 197.2 176 58.0
Cpa.g.sc28.13 Carica papaya HOM05D003667 ORTHO05D004397 1.7e-48 196.8 171 58.5
Thhalv10014611m.g Eutrema salsugineum HOM05D003667 ORTHO05D004397 2.3e-48 196.4 176 59.1
Thhalv10017208m.g Eutrema salsugineum HOM05D003667 ORTHO05D004397 3.0e-48 196.1 176 58.0
Glyma.18G114700 Glycine max HOM05D003667 ORTHO05D004397 3.0e-48 196.1 170 60.0
Lj2g0005685 Lotus japonicus HOM05D003667 ORTHO05D004397 5.1e-48 195.3 170 63.5
Zm00001eb052810 Zea mays HOM05D003667 ORTHO05D004397 8.6e-48 194.5 180 57.2
Sp4g19200 Schrenkiella parvula HOM05D003667 ORTHO05D004397 1.1e-47 194.1 176 56.8
Lalb_Chr17g0348151 Lupinus albus HOM05D003667 ORTHO05D004397 2.5e-47 193.0 170 62.4
SEGI_40073 Sequoiadendron giganteum HOM05D003667 ORTHO05D004397 2.5e-47 193.0 178 58.4
TPR.G14738 Trifolium pratense HOM05D003667 ORTHO05D004397 4.3e-47 192.2 169 59.8
BcaB02g09321 Brassica carinata HOM05D003667 ORTHO05D004397 5.6e-47 191.8 171 58.5
CARHR257860 Cardamine hirsuta HOM05D003667 ORTHO05D004397 1.6e-46 190.3 176 56.8
Haze_14026 Corylus avellana HOM05D003667 ORTHO05D004397 4.7e-46 188.7 167 63.5
Carub.0008s1055 Capsella rubella HOM05D003667 ORTHO05D004397 8.1e-46 188.0 176 56.2
unitig_8.g4943 Utricularia gibba HOM05D003667 ORTHO05D004397 2.3e-45 186.4 186 55.9
AL8G24670 Arabidopsis lyrata HOM05D003667 ORTHO05D004397 3.1e-45 186.0 176 56.2
Medtr5g090520 Medicago truncatula HOM05D003667 ORTHO05D004397 5.2e-45 185.3 170 58.8
AT5G50440 Arabidopsis thaliana HOM05D003667 ORTHO05D004397 1.2e-44 184.1 176 55.1
Ca_06238_v3 Cicer arietinum L. HOM05D003667 ORTHO05D004397 4.4e-44 182.2 170 59.4
Os03g0655200 Oryza sativa ssp. japonica HOM05D003667 ORTHO05D004397 7.6e-44 181.4 177 54.8
Lsat_1_v5_gn_6_31701 Lactuca sativa HOM05D003667 ORTHO05D004397 1.1e-42 177.6 131 69.5
Psat2g018160 Pisum sativum HOM05D003667 ORTHO05D004397 1.1e-42 177.6 170 57.1
Lsat_1_v5_gn_2_103600 Lactuca sativa HOM05D003667 ORTHO05D004397 1.4e-42 177.2 139 66.2
SGA_v2.0_scaffold41G15803 Striga asiatica HOM05D003667 ORTHO05D004397 2.4e-42 176.4 228 47.8
HPP92_027259 Vanilla planifolia HOM05D003667 ORTHO05D004397 4.1e-42 175.6 128 68.8
ECA238G3478 Erigeron canadensis HOM05D003667 ORTHO05D004397 7.1e-42 174.9 137 65.7
Peaxi162Scf00776g00027 Petunia axillaris HOM05D003667 ORTHO05D004397 1.2e-41 174.1 171 59.1
SGA_v2.0_scaffold392G50657 Striga asiatica HOM05D003667 ORTHO05D004397 1.6e-41 173.7 208 50.0
Dinv25059 Davidia involucrata HOM05D003667 ORTHO05D004397 1.0e-40 171.0 121 73.6
HanXRQChr14g0453611 Helianthus annuus HOM05D003667 ORTHO05D004397 1.0e-40 171.0 143 63.6
Mapoly0001s0234 Marchantia polymorpha HOM05D003667 ORTHO05D004397 3.3e-39 166.0 174 49.4
AUR62033108 Chenopodium quinoa HOM05D003667 ORTHO05D004397 4.7e-38 162.2 90 95.6
DCAR_013483 Daucus carota HOM05D003667 ORTHO05D004397 1.8e-37 160.2 109 75.2
SMO358G0442 Selaginella moellendorffii HOM05D003667 ORTHO05D004397 2.4e-37 159.8 176 52.3
Pp3c7_13000 Physcomitrium patens HOM05D003667 ORTHO05D004397 1.7e-35 153.7 191 45.0
Oeu003870.1 Olea europaea HOM05D003667 ORTHO05D004397 2.2e-35 153.3 127 66.1
Pp3c11_11980 Physcomitrium patens HOM05D003667 ORTHO05D004397 2.2e-35 153.3 191 44.5
Prupe.7G022400 Prunus persica HOM05D003667 ORTHO05D004397 1.4e-34 150.6 109 69.7
AagrBONN_evm.TU.Sc2ySwM_117.3822 Anthoceros agrestis HOM05D003667 ORTHO05D004397 2.4e-34 149.8 175 46.9
AagrBONN_evm.TU.Sc2ySwM_362.869 Anthoceros agrestis HOM05D003667 ORTHO05D004397 1.2e-33 147.5 181 45.3
BcaC02g11814 Brassica carinata HOM05D003667 ORTHO05D004397 1.7e-32 143.7 109 65.1
Rhsim02G0195900 Rhododendron simsii HOM05D003667 ORTHO05D004397 4.3e-31 139.0 90 81.1
Lj6g0022641 Lotus japonicus HOM05D003667 ORTHO05D004397 2.1e-30 136.7 109 67.9
CSS0044789 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 6.2e-30 135.2 90 80.0
CiPaw.04G007600 Carya illinoinensis HOM05D003667 ORTHO05D004397 6.2e-30 135.2 109 68.8
Ah.08g213170 Amaranthus hybridus HOM05D003667 ORTHO05D004397 4.5e-28 129.0 89 71.9
CDE10G1036 Ceratophyllum demersum HOM05D003667 ORTHO05D004397 5.8e-28 128.6 116 62.1
AagrBONN_evm.TU.Sc2ySwM_368.3326 Anthoceros agrestis HOM05D003667 ORTHO05D004397 2.9e-27 126.3 182 41.8
arahy.Tifrunner.gnm1.ann1.B982CP Arachis hypogaea HOM05D003667 ORTHO05D004397 3.8e-27 125.9 171 46.8
Ah.08g213160 Amaranthus hybridus HOM05D003667 ORTHO05D004397 1.2e-25 120.9 83 80.7
QL07p048797 Quercus lobata HOM05D000002 ORTHO05D000001 6.0e-25 118.6 191 47.6
arahy.Tifrunner.gnm1.ann1.K13S6W Arachis hypogaea HOM05D004599 ORTHO05D005564 1.6e-22 110.5 154 46.1
MSTRG.10431 Avicennia marina HOM05D003667 ORTHO05D004397 1.1e-21 107.8 91 61.5
Cre12.g554200 Chlamydomonas reinhardtii HOM05D003667 ORTHO05D004397 3.1e-21 106.3 170 36.5
Actinidia03933 Actinidia chinensis HOM05D003667 ORTHO05D004397 9.0e-21 104.8 112 54.5
CAN.G1036.8 Capsicum annuum HOM05D003667 ORTHO05D004397 1.5e-20 104.0 144 45.1
unitig_578.g16057 Utricularia gibba HOM05D003667 ORTHO05D004397 1.5e-20 104.0 153 45.8
Rhsim02G0194700 Rhododendron simsii HOM05D003667 ORTHO05D004397 3.4e-20 102.8 80 63.8
Rhsim02G0195800 Rhododendron simsii HOM05D003667 ORTHO05D004397 3.4e-20 102.8 80 63.8
Actinidia37807 Actinidia chinensis HOM05D003667 ORTHO05D004397 4.5e-20 102.4 175 40.6
Solyc05g040100.4 Solanum lycopersicum HOM05D003667 ORTHO05D004397 4.5e-20 102.4 92 62.0
arahy.Tifrunner.gnm1.ann1.835HL2 Arachis hypogaea HOM05D004313 ORTHO05D004397 1.4e-18 97.4 88 56.8
CSS0038188 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 1.2e-17 94.4 81 60.5
Oeu063104.1 Olea europaea HOM05D003667 ORTHO05D004397 1.0e-16 91.3 90 55.6
MCO05G601 Micromonas commoda HOM05D003667 ORTHO05D004397 5.1e-16 89.0 171 33.3
Nitab4.5_0002669g0010 Nicotiana tabacum HOM05D003667 ORTHO05D004397 6.7e-16 88.6 113 46.0
arahy.Tifrunner.gnm1.ann1.SJAT5A Arachis hypogaea HOM05D003667 ORTHO05D003672 3.3e-15 86.3 122 45.9
arahy.Tifrunner.gnm1.ann1.SS7A45 Arachis hypogaea HOM05D000726 ORTHO05D004397 2.8e-14 83.2 80 56.2
Nitab4.5_0001701g0060 Nicotiana tabacum HOM05D003667 ORTHO05D004397 2.8e-14 83.2 181 35.4
Lalb_Chr10g0106511 Lupinus albus HOM05D003667 ORTHO05D004397 1.8e-13 80.5 82 51.2
BcaC02g10601 Brassica carinata HOM05D003667 ORTHO05D004397 6.9e-13 78.6 135 36.3
PRCOL_00002098 Prasinoderma coloniale HOM05D003667 ORTHO05D004397 9.0e-13 78.2 174 30.5
Haze_20440 Corylus avellana HOM05D003667 ORTHO05D004397 5.8e-12 75.5 62 67.7
Cfa017699 Carpinus fangiana HOM05D003667 ORTHO05D004397 7.6e-12 75.1 62 67.7
Lalb_Chr10g0106501 Lupinus albus HOM05D003667 ORTHO05D004397 3.8e-11 72.8 62 64.5
HanXRQChr04g0115761 Helianthus annuus HOM05D003667 ORTHO05D004397 3.5e-09 66.2 49 65.3
FvH4_3g32534 Fragaria vesca HOM05D003667 ORTHO05D004397 4.6e-09 65.9 56 64.3
VMungo0720G0063 Vigna mungo HOM05D003667 ORTHO05D004397 2.3e-08 63.5 72 40.3
Solyc05g040090.1 Solanum lycopersicum HOM05D003667 ORTHO05D004397 6.7e-08 62.0 81 42.0
MD05G1212000 Malus domestica HOM05D003667 ORTHO05D246792 1.5e-07 60.8 41 68.3
COL.COLO4_28622 Corchorus olitorius HOM05D003667 ORTHO05D004397 1.9e-07 60.5 49 63.3
Oeu032224.2 Olea europaea HOM05D003667 ORTHO05D004397 1.6e-06 57.4 69 50.7
Rhsim02G0196100 Rhododendron simsii HOM05D000056 ORTHO05D000019 2.8e-06 56.6 66 48.5
FvH4_5g38702 Fragaria vesca HOM05D003667 ORTHO05D004397 8.2e-06 55.1 38 76.3


User provided reference genes

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