Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g128250 Amaranthus hybridus HOM05D007436 ORTHO05D009398 1.4e-136 489.6 240 100.0
EL10Ac6g14103 Beta vulgaris HOM05D007436 ORTHO05D009398 4.5e-111 404.8 235 82.6
AUR62028431 Chenopodium quinoa HOM05D007436 ORTHO05D009398 1.4e-107 393.3 240 79.2
AUR62002774 Chenopodium quinoa HOM05D007436 ORTHO05D009398 4.8e-105 384.8 240 77.5
Hund25779 Selenicereus undatus HOM05D007436 ORTHO05D009398 9.8e-90 334.0 211 76.8
Dinv04377 Davidia involucrata HOM05D007436 ORTHO05D009398 1.5e-82 310.1 230 65.7
Sc24g0002050 Simmondsia chinensis HOM05D007436 ORTHO05D009398 1.5e-82 310.1 235 63.8
QL05p066185 Quercus lobata HOM05D007436 ORTHO05D009398 8.3e-81 304.3 195 72.8
Actinidia01458 Actinidia chinensis HOM05D007436 ORTHO05D009398 1.2e-79 300.4 199 72.9
MSTRG.14579 Avicennia marina HOM05D007436 ORTHO05D009398 7.3e-77 291.2 195 68.7
Rhsim13G0138000 Rhododendron simsii HOM05D007436 ORTHO05D009398 7.3e-77 291.2 206 69.4
TAR627G0530 Trochodendron aralioides HOM05D007436 ORTHO05D009398 9.5e-77 290.8 238 60.5
Prupe.4G000400 Prunus persica HOM05D007436 ORTHO05D009398 1.6e-76 290.0 198 69.2
Hma1.2p1_0394F.1_g143390 Hydrangea macrophylla HOM05D007436 ORTHO05D009398 2.1e-76 289.7 197 69.5
Thecc.06G244700 Theobroma cacao HOM05D007436 ORTHO05D009398 2.8e-76 289.3 195 71.3
Migut.H01642 Erythranthe guttata HOM05D007436 ORTHO05D009398 1.1e-75 287.3 195 69.2
MBI14_g12730_MAGBIO Magnolia biondii HOM05D007436 ORTHO05D009398 2.3e-75 286.2 205 66.8
Ciclev10016151m.g Citrus clementina HOM05D007436 ORTHO05D009398 1.2e-74 283.9 218 63.8
Gohir.D05G180600 Gossypium hirsutum HOM05D007436 ORTHO05D009398 1.2e-74 283.9 215 64.2
Gorai.009G185600 Gossypium raimondii HOM05D007436 ORTHO05D009398 1.2e-74 283.9 215 64.2
MD10G1342400 Malus domestica HOM05D007436 ORTHO05D009398 1.2e-74 283.9 192 68.2
COL.COLO4_31969 Corchorus olitorius HOM05D007436 ORTHO05D009398 2.0e-74 283.1 194 69.1
Haze_07065 Corylus avellana HOM05D007436 ORTHO05D009398 2.0e-74 283.1 195 70.8
Lj6g0025098 Lotus japonicus HOM05D007436 ORTHO05D009398 2.0e-74 283.1 177 73.4
RcHm_v2.0_Chr5g0000011 Rosa chinensis HOM05D007436 ORTHO05D009398 2.6e-74 282.7 195 68.2
Potri.016G000900 Populus trichocarpa HOM05D007436 ORTHO05D009398 4.4e-74 282.0 223 63.7
TWI38G0239 Tripterygium wilfordii HOM05D007436 ORTHO05D009398 4.4e-74 282.0 184 71.2
Aqoxy5G00546 Aquilegia oxysepala HOM05D007436 ORTHO05D009398 1.7e-73 280.0 171 76.0
FvH4_3g00011 Fragaria vesca HOM05D007436 ORTHO05D009398 2.2e-73 279.6 194 68.0
Nitab4.5_0000147g0110 Nicotiana tabacum HOM05D007436 ORTHO05D009398 2.9e-73 279.3 194 68.6
CAN.G1905.6 Capsicum annuum HOM05D007436 ORTHO05D009398 6.4e-73 278.1 191 67.5
Glyma.09G017600 Glycine max HOM05D007436 ORTHO05D009398 8.3e-73 277.7 194 66.0
Lalb_Chr15g0088471 Lupinus albus HOM05D007436 ORTHO05D009398 8.3e-73 277.7 193 66.8
Ca_24687_v3 Cicer arietinum L. HOM05D007436 ORTHO05D009398 1.4e-72 276.9 186 69.9
Potri.006G000600 Populus trichocarpa HOM05D007436 ORTHO05D009398 1.4e-72 276.9 176 73.9
Glyma.15G123400 Glycine max HOM05D007436 ORTHO05D009398 1.9e-72 276.6 224 58.9
PGR004G2900 Punica granatum HOM05D007436 ORTHO05D009398 1.9e-72 276.6 198 67.7
Nitab4.5_0001663g0200 Nicotiana tabacum HOM05D007436 ORTHO05D009398 2.4e-72 276.2 197 68.5
Phvul.006G134500 Phaseolus vulgaris HOM05D007436 ORTHO05D009398 2.4e-72 276.2 177 71.8
VMungo0540G0488 Vigna mungo HOM05D007436 ORTHO05D009398 2.4e-72 276.2 177 72.3
ECA247G4131 Erigeron canadensis HOM05D007436 ORTHO05D009398 3.2e-72 275.8 174 73.0
ATR0751G013 Amborella trichopoda HOM05D007436 ORTHO05D009398 4.1e-72 275.4 227 59.5
Medtr2g028000 Medicago truncatula HOM05D007436 ORTHO05D009398 9.2e-72 274.2 177 71.2
FAN21G3717 Fragaria x ananassa HOM05D007436 ORTHO05D009398 1.2e-71 273.9 194 67.0
HPP92_000124 Vanilla planifolia HOM05D007436 ORTHO05D009398 1.6e-71 273.5 223 61.9
PGSC0003DMG400027262 Solanum tuberosum HOM05D007436 ORTHO05D009398 2.1e-71 273.1 179 72.1
Cc09_g00050 Coffea canephora HOM05D007436 ORTHO05D009398 2.7e-71 272.7 182 70.3
TPR.G10477 Trifolium pratense HOM05D007436 ORTHO05D009398 2.7e-71 272.7 177 71.2
Psat1g171240 Pisum sativum HOM05D007436 ORTHO05D009398 3.5e-71 272.3 177 70.1
Sed0017957 Sechium edule HOM05D007436 ORTHO05D009398 3.5e-71 272.3 196 65.8
AT3G52155 Arabidopsis thaliana HOM05D007436 ORTHO05D009398 4.6e-71 271.9 181 70.2
CDE03G0161 Ceratophyllum demersum HOM05D007436 ORTHO05D009398 4.6e-71 271.9 213 60.6
CsaV3_6G047980 Cucumis sativus L. HOM05D007436 ORTHO05D009398 4.6e-71 271.9 196 65.8
DCAR_015316 Daucus carota HOM05D007436 ORTHO05D009398 6.0e-71 271.6 198 65.7
Solyc04g015330.3 Solanum lycopersicum HOM05D007436 ORTHO05D009398 7.8e-71 271.2 181 70.2
Lsat_1_v5_gn_7_12720 Lactuca sativa HOM05D007436 ORTHO05D009398 1.0e-70 270.8 202 62.4
Sopen04g007390 Solanum pennellii HOM05D007436 ORTHO05D009398 3.0e-70 269.2 181 69.6
AL5G32730 Arabidopsis lyrata HOM05D007436 ORTHO05D009398 3.9e-70 268.9 186 68.3
Os09g0287300 Oryza sativa ssp. japonica HOM05D007436 ORTHO05D009398 3.9e-70 268.9 176 72.2
ClCG01G021000 Citrullus lanatus HOM05D007436 ORTHO05D009398 6.6e-70 268.1 196 66.3
Sp5g10120 Schrenkiella parvula HOM05D007436 ORTHO05D009398 6.6e-70 268.1 180 70.0
HanXRQChr05g0129051 Helianthus annuus HOM05D007436 ORTHO05D009398 8.6e-70 267.7 171 71.3
BcaC06g33383 Brassica carinata HOM05D007436 ORTHO05D009398 1.1e-69 267.3 184 67.9
C07p46820 Brassica napus HOM05D007436 ORTHO05D009398 1.1e-69 267.3 184 67.9
BolC7t45199H Brassica oleracea HOM05D007436 ORTHO05D009398 1.1e-69 267.3 184 67.9
CDE06G2435 Ceratophyllum demersum HOM05D007436 ORTHO05D009398 1.1e-69 267.3 202 61.9
A03p48730 Brassica napus HOM05D007436 ORTHO05D009398 1.9e-69 266.5 184 67.9
Thhalv10010705m.g Eutrema salsugineum HOM05D007436 ORTHO05D009398 2.5e-69 266.2 189 67.2
Oeu016929.1 Olea europaea HOM05D007436 ORTHO05D009398 2.5e-69 266.2 184 69.0
GSVIVG01002756001 Vitis vinifera HOM05D007436 ORTHO05D009398 2.5e-69 266.2 173 72.3
BraA03t13973Z Brassica rapa HOM05D007436 ORTHO05D009398 3.3e-69 265.8 184 67.4
Aa31LG10G7250 Aethionema arabicum HOM05D007436 ORTHO05D009398 5.6e-69 265.0 172 71.5
Carub.0005s1851 Capsella rubella HOM05D007436 ORTHO05D009398 5.6e-69 265.0 181 69.1
vmacro03584 Vaccinium macrocarpon HOM05D007436 ORTHO05D009398 1.2e-68 263.8 211 63.0
Zm00001eb309010 Zea mays HOM05D007436 ORTHO05D009398 4.7e-68 261.9 178 70.8
Nn3g16606 Nelumbo nucifera HOM05D007436 ORTHO05D009398 1.4e-67 260.4 156 75.0
THA.LOC104813862 Tarenaya hassleriana HOM05D007436 ORTHO05D009398 1.8e-67 260.0 179 67.0
CARHR161900 Cardamine hirsuta HOM05D007436 ORTHO05D009398 4.0e-67 258.8 177 68.9
Mapoly0056s0036 Marchantia polymorpha HOM05D007436 ORTHO05D009398 1.5e-66 256.9 215 58.6
Cpa.g.sc27.183 Carica papaya HOM05D007436 ORTHO05D009398 5.8e-66 255.0 228 57.5
Sabra06G0000900 Salix brachista HOM05D002163 ORTHO05D002386 1.4e-64 250.4 202 63.4
CiPaw.09G113200 Carya illinoinensis HOM05D007436 ORTHO05D009398 3.2e-64 249.2 159 73.0
Peaxi162Scf00563g00525 Petunia axillaris HOM05D007436 ORTHO05D009398 6.0e-63 245.0 155 73.5
Zm00001eb097480 Zea mays HOM05D007436 ORTHO05D009398 1.7e-62 243.4 206 61.7
arahy.Tifrunner.gnm1.ann1.61UQ0U Arachis hypogaea HOM05D007436 ORTHO05D009398 5.1e-62 241.9 209 59.8
Pp3c4_8570 Physcomitrium patens HOM05D007436 ORTHO05D009398 4.7e-60 235.3 172 64.5
Atru.chr1.2207 Acer truncatum HOM05D002163 ORTHO05D002386 1.2e-58 230.7 159 70.4
SMO358G0652 Selaginella moellendorffii HOM05D007436 ORTHO05D009398 3.4e-58 229.2 170 59.4
AagrBONN_evm.TU.Sc2ySwM_228.5510 Anthoceros agrestis HOM05D007436 ORTHO05D009398 1.4e-56 223.8 176 61.9
CBR_g31519 Chara braunii HOM05D007436 ORTHO05D009398 4.3e-53 212.2 184 56.5
Sabra16G0007700 Salix brachista HOM05D002163 ORTHO05D002386 1.8e-46 190.3 203 51.2
Hma1.2p1_0394F.1_g143400 Hydrangea macrophylla HOM05D007436 ORTHO05D009398 1.9e-45 186.8 138 65.2
Lj1A1250G60 Lonicera japonica HOM05D007436 ORTHO05D009398 5.6e-45 185.3 122 71.3
Manes.09G072800 Manihot esculenta HOM05D007436 ORTHO05D009398 2.1e-44 183.3 121 72.7
Gohir.A05G177200 Gossypium hirsutum HOM05D007436 ORTHO05D009398 1.2e-42 177.6 157 56.7
Eucgr.D00973 Eucalyptus grandis HOM05D007436 ORTHO05D009398 6.4e-41 171.8 204 45.6
MELO3C007986.2 Cucumis melo HOM05D007436 ORTHO05D009398 1.0e-38 164.5 137 59.1
SGA_v2.0_scaffold49G18215 Striga asiatica HOM05D007436 ORTHO05D009398 1.1e-35 154.5 189 45.5
MCO14G290 Micromonas commoda HOM05D007436 ORTHO05D009398 2.9e-33 146.4 195 42.6
SEGI_34845 Sequoiadendron giganteum HOM05D007436 ORTHO05D009398 1.3e-30 137.5 83 72.3
Cre10.g431850 Chlamydomonas reinhardtii HOM05D007436 ORTHO05D009398 5.7e-29 132.1 173 41.0
PRCOL_00004330 Prasinoderma coloniale HOM05D007436 ORTHO05D009398 1.8e-22 110.5 156 38.5
PRCOL_00006376 Prasinoderma coloniale HOM05D007436 ORTHO05D009398 3.3e-21 106.3 180 35.0
Lj1A1250G59 Lonicera japonica HOM05D007436 ORTHO05D009398 2.2e-12 77.0 39 82.1


User provided reference genes

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