Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 1.7e-123 446.0 228 100.0
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 5.3e-61 238.4 226 60.6
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 5.9e-60 235.0 168 73.2
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 6.5e-59 231.5 228 59.2
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 6.5e-59 231.5 229 60.3
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 8.5e-59 231.1 195 66.2
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 8.5e-59 231.1 230 60.0
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 7.2e-58 228.0 229 60.7
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.2e-57 227.3 232 60.8
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 1.2e-57 227.3 201 64.7
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 1.2e-57 227.3 161 72.0
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 1.2e-57 227.3 161 72.0
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.6e-57 226.9 145 77.9
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.6e-57 226.9 145 77.9
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.6e-57 226.9 219 58.4
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 2.1e-57 226.5 228 59.6
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 6.1e-57 224.9 145 76.6
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 6.1e-57 224.9 221 57.9
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 8.0e-57 224.6 146 76.0
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 1.4e-56 223.8 225 56.9
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 1.4e-56 223.8 190 64.7
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 2.3e-56 223.0 202 60.9
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 3.0e-56 222.6 190 64.2
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 3.9e-56 222.2 230 56.1
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 5.2e-56 221.9 222 59.5
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 6.7e-56 221.5 186 66.1
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 1.1e-55 220.7 203 61.6
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 1.5e-55 220.3 223 56.1
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 1.5e-55 220.3 146 75.3
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 1.5e-55 220.3 219 58.4
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 2.0e-55 219.9 220 55.5
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 2.0e-55 219.9 228 55.7
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 2.6e-55 219.5 188 63.3
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 2.6e-55 219.5 227 58.6
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 3.3e-55 219.2 185 65.4
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 5.7e-55 218.4 225 60.0
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 5.7e-55 218.4 215 56.7
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 5.7e-55 218.4 224 57.6
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 7.4e-55 218.0 171 68.4
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 1.3e-54 217.2 225 56.0
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 2.2e-54 216.5 164 69.5
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 2.2e-54 216.5 217 56.7
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 2.8e-54 216.1 197 60.9
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 2.8e-54 216.1 175 65.7
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 3.7e-54 215.7 205 60.0
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 3.7e-54 215.7 214 58.4
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 3.7e-54 215.7 200 61.5
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 4.8e-54 215.3 204 60.8
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 4.8e-54 215.3 146 70.5
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 6.3e-54 214.9 232 54.7
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 6.3e-54 214.9 209 59.8
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 1.8e-53 213.4 234 56.0
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 1.8e-53 213.4 146 72.6
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 2.4e-53 213.0 187 67.9
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.4e-53 213.0 232 55.2
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 3.1e-53 212.6 184 63.0
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 5.3e-53 211.8 194 61.3
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 7.0e-53 211.5 146 72.6
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 7.0e-53 211.5 212 59.0
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 7.0e-53 211.5 236 55.1
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 9.1e-53 211.1 230 53.0
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 9.1e-53 211.1 215 56.7
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 9.1e-53 211.1 224 53.6
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 9.1e-53 211.1 215 56.7
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 1.2e-52 210.7 184 70.1
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 1.6e-52 210.3 147 74.8
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 1.6e-52 210.3 146 71.9
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 2.0e-52 209.9 197 60.9
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 2.0e-52 209.9 217 55.8
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 2.6e-52 209.5 140 73.6
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 2.6e-52 209.5 184 62.5
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 1.3e-51 207.2 171 64.3
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 1.7e-51 206.8 200 58.5
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 1.7e-51 206.8 201 57.7
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 8.5e-51 204.5 200 57.5
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 2.5e-50 203.0 200 57.5
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 2.1e-49 199.9 185 58.9
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.1e-49 199.9 234 53.8
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 1.4e-48 197.2 248 48.4
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 3.0e-48 196.1 227 51.1
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 4.0e-48 195.7 223 50.7
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 4.0e-48 195.7 203 54.2
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 5.2e-48 195.3 200 56.5
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 1.3e-46 190.7 235 50.6
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 1.3e-46 190.7 125 76.8
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 4.8e-46 188.7 202 54.0
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 1.8e-45 186.8 178 61.2
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 5.4e-45 185.3 170 63.5
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 1.2e-44 184.1 324 44.1
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 2.0e-44 183.3 135 65.2
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 2.7e-44 183.0 135 66.7
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 5.9e-44 181.8 163 57.1
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 2.2e-43 179.9 134 67.2
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 1.9e-42 176.8 143 62.2
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 3.2e-42 176.0 143 60.1
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 4.2e-42 175.6 107 80.4
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 2.3e-40 169.9 188 51.1
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 4.4e-39 165.6 161 61.5
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 4.4e-39 165.6 184 57.1
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.7e-38 163.7 212 49.1
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 4.9e-38 162.2 212 51.9
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 4.9e-38 162.2 108 74.1
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 6.3e-38 161.8 121 69.4
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 5.4e-37 158.7 260 44.6
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 1.3e-35 154.1 172 57.6
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.1e-34 151.0 222 46.8
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 5.5e-34 148.7 153 58.8
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 2.1e-33 146.7 245 44.5
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 5.2e-32 142.1 151 48.3
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 1.5e-31 140.6 151 47.7
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 3.4e-31 139.4 187 48.1
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 5.4e-21 105.5 137 44.5
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 4.7e-17 92.4 124 38.7
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 8.1e-17 91.7 75 56.0
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 1.4e-16 90.9 77 62.3
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 4.1e-13 79.3 125 35.2
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 2.1e-12 77.0 88 50.0
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.1e-10 71.2 180 37.8
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 1.8e-08 63.9 53 54.7
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 9.9e-07 58.2 48 56.2
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 2.2e-06 57.0 39 69.2


User provided reference genes

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