Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g126690 Amaranthus hybridus HOM05D004951 ORTHO05D005840 3.2e-122 441.8 229 100.0
EL10Ac1g02264 Beta vulgaris HOM05D004951 ORTHO05D005840 4.1e-85 318.5 226 72.1
AUR62035440 Chenopodium quinoa HOM05D004951 ORTHO05D005840 4.5e-76 288.5 225 65.3
AUR62035728 Chenopodium quinoa HOM05D004951 ORTHO05D005840 1.2e-73 280.4 225 63.6
Sc02g0008460 Simmondsia chinensis HOM05D004951 ORTHO05D005840 1.4e-69 266.9 230 58.7
GSVIVG01009867001 Vitis vinifera HOM05D004951 ORTHO05D005840 3.6e-65 252.3 229 58.5
ClCG11G002570 Citrullus lanatus HOM05D004951 ORTHO05D005840 2.2e-62 243.0 199 61.8
Rhsim06G0023300 Rhododendron simsii HOM05D004951 ORTHO05D005840 8.3e-62 241.1 230 57.4
arahy.Tifrunner.gnm1.ann1.1I2LZG Arachis hypogaea HOM05D004951 ORTHO05D005840 1.8e-61 240.0 228 56.1
Lj1g0015493 Lotus japonicus HOM05D004951 ORTHO05D005840 1.8e-61 240.0 228 58.3
vmacro21713 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 1.8e-61 240.0 205 60.0
arahy.Tifrunner.gnm1.ann1.T7R5G6 Arachis hypogaea HOM05D004951 ORTHO05D005840 2.4e-61 239.6 229 55.9
TAR381G0914 Trochodendron aralioides HOM05D004951 ORTHO05D005840 3.1e-61 239.2 233 57.9
Ca_08030_v3 Cicer arietinum L. HOM05D004951 ORTHO05D005840 4.1e-61 238.8 228 55.7
CANSAT78G0251 Cannabis sativa HOM05D004951 ORTHO05D005840 5.3e-61 238.4 230 54.8
arahy.Tifrunner.gnm1.ann1.5C4441 Arachis hypogaea HOM05D004951 ORTHO05D005840 9.1e-61 237.7 226 55.8
CsaV3_3G045700 Cucumis sativus L. HOM05D004951 ORTHO05D005840 1.6e-60 236.9 198 61.6
QL02p011069 Quercus lobata HOM05D004951 ORTHO05D005840 2.7e-60 236.1 225 56.9
ClCG05G018480 Citrullus lanatus HOM05D004951 ORTHO05D005840 3.5e-60 235.7 190 61.6
Gohir.A07G207200 Gossypium hirsutum HOM05D004951 ORTHO05D005840 7.7e-60 234.6 229 57.2
Gorai.005G111600 Gossypium raimondii HOM05D004951 ORTHO05D005840 7.7e-60 234.6 229 57.2
CSS0031211 Camellia sinensis var. sinensis HOM05D004951 ORTHO05D005840 1.0e-59 234.2 199 61.3
Gohir.A09G014000 Gossypium hirsutum HOM05D004951 ORTHO05D005840 1.0e-59 234.2 229 57.2
Gohir.D02G097900 Gossypium hirsutum HOM05D004951 ORTHO05D005840 1.0e-59 234.2 229 57.2
vmacro14381 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 1.0e-59 234.2 205 58.5
Atru.chr2.1521 Acer truncatum HOM05D004951 ORTHO05D005840 1.3e-59 233.8 229 55.0
COL.COLO4_26170 Corchorus olitorius HOM05D004951 ORTHO05D005840 1.3e-59 233.8 230 55.7
Dinv39502 Davidia involucrata HOM05D004951 ORTHO05D005840 3.8e-59 232.3 233 55.8
PGR031G1064 Punica granatum HOM05D004951 ORTHO05D005840 6.5e-59 231.5 228 54.4
Potri.005G236800 Populus trichocarpa HOM05D004951 ORTHO05D005840 1.1e-58 230.7 227 53.3
COL.COLO4_20267 Corchorus olitorius HOM05D004951 ORTHO05D005840 1.5e-58 230.3 224 55.8
Lsat_1_v5_gn_8_80440 Lactuca sativa HOM05D004951 ORTHO05D005840 1.5e-58 230.3 225 54.7
Cc10_g01890 Coffea canephora HOM05D004951 ORTHO05D005840 1.9e-58 229.9 230 53.0
CiPaw.08G064600 Carya illinoinensis HOM05D004951 ORTHO05D005840 3.2e-58 229.2 230 55.7
Ciclev10002352m.g Citrus clementina HOM05D004951 ORTHO05D005840 3.2e-58 229.2 230 54.8
ECA236G4786 Erigeron canadensis HOM05D004951 ORTHO05D005840 7.2e-58 228.0 194 61.3
Hma1.2p1_0638F.1_g193670 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 2.7e-57 226.1 234 51.7
Cpa.g.sc26.26 Carica papaya HOM05D004951 ORTHO05D005840 4.7e-57 225.3 235 54.0
Sed0001853 Sechium edule HOM05D004951 ORTHO05D005840 4.7e-57 225.3 230 51.3
Actinidia15407 Actinidia chinensis HOM05D004951 ORTHO05D005840 8.0e-57 224.6 226 54.9
Glyma.18G246500 Glycine max HOM05D004951 ORTHO05D005840 8.0e-57 224.6 227 55.5
Phvul.008G050600 Phaseolus vulgaris HOM05D004951 ORTHO05D005840 1.0e-56 224.2 232 56.5
Eucgr.E00855 Eucalyptus grandis HOM05D004951 ORTHO05D005840 2.3e-56 223.0 229 53.7
Oeu024529.1 Olea europaea HOM05D004951 ORTHO05D005840 2.3e-56 223.0 235 54.0
Oeu056857.1 Olea europaea HOM05D004951 ORTHO05D005840 3.0e-56 222.6 183 61.7
Lalb_Chr03g0040521 Lupinus albus HOM05D004951 ORTHO05D005840 4.0e-56 222.2 225 54.7
Glyma.09G246500 Glycine max HOM05D004951 ORTHO05D005840 5.2e-56 221.9 228 55.3
MD10G1149500 Malus domestica HOM05D004951 ORTHO05D005840 6.8e-56 221.5 229 49.8
Nn5g29279 Nelumbo nucifera HOM05D004951 ORTHO05D005840 6.8e-56 221.5 217 52.1
Sabra05G0183100 Salix brachista HOM05D004951 ORTHO05D005840 6.8e-56 221.5 227 52.4
Thecc.08G041400 Theobroma cacao HOM05D004951 ORTHO05D005840 6.8e-56 221.5 228 54.8
MSTRG.1208 Avicennia marina HOM05D004951 ORTHO05D005840 8.8e-56 221.1 234 51.3
Psat6g222440 Pisum sativum HOM05D004951 ORTHO05D005840 8.8e-56 221.1 228 53.1
HanXRQChr02g0039471 Helianthus annuus HOM05D004951 ORTHO05D005840 1.2e-55 220.7 226 53.5
Manes.05G149800 Manihot esculenta HOM05D004951 ORTHO05D005840 1.5e-55 220.3 228 53.9
Potri.002G024601 Populus trichocarpa HOM05D004951 ORTHO05D005840 1.5e-55 220.3 229 51.5
Cfa013928 Carpinus fangiana HOM05D004951 ORTHO05D005840 2.0e-55 219.9 229 52.4
Duzib116G0591 Durio zibethinus HOM05D004951 ORTHO05D005840 2.0e-55 219.9 230 55.7
THA.LOC104809415 Tarenaya hassleriana HOM05D004951 ORTHO05D005840 2.0e-55 219.9 228 51.3
Gohir.A07G207300 Gossypium hirsutum HOM05D004951 ORTHO05D005840 2.6e-55 219.5 202 58.4
PSO675G8856 Papaver somniferum HOM05D004951 ORTHO05D005840 3.4e-55 219.2 230 51.7
Actinidia37925 Actinidia chinensis HOM05D004951 ORTHO05D005840 4.4e-55 218.8 230 52.6
VMungo1383G3289 Vigna mungo HOM05D004951 ORTHO05D005840 5.7e-55 218.4 231 54.5
PGR031G3408 Punica granatum HOM05D004951 ORTHO05D005840 7.5e-55 218.0 189 59.8
HanXRQChr10g0300951 Helianthus annuus HOM05D004951 ORTHO05D005840 9.8e-55 217.6 197 56.3
MD05G1155200 Malus domestica HOM05D004951 ORTHO05D005840 9.8e-55 217.6 229 49.3
CAN.G103.3 Capsicum annuum HOM05D004951 ORTHO05D005840 1.7e-54 216.9 184 60.3
Solyc05g054140.3 Solanum lycopersicum HOM05D004951 ORTHO05D005840 6.3e-54 214.9 229 51.1
Sopen05g032630 Solanum pennellii HOM05D004951 ORTHO05D005840 6.3e-54 214.9 229 51.5
PGSC0003DMG400008458 Solanum tuberosum HOM05D004951 ORTHO05D005840 1.1e-53 214.2 184 59.8
PSO541G0679 Papaver somniferum HOM05D004951 ORTHO05D005840 1.4e-53 213.8 208 53.8
Aa31LG4G5890 Aethionema arabicum HOM05D004951 ORTHO05D005840 1.8e-53 213.4 184 58.2
Eucgr.F02088 Eucalyptus grandis HOM05D004951 ORTHO05D005840 3.1e-53 212.6 229 52.8
PSO675G7262 Papaver somniferum HOM05D004951 ORTHO05D005840 4.1e-53 212.2 230 49.1
Dinv31828 Davidia involucrata HOM05D004951 ORTHO05D005840 5.4e-53 211.8 197 59.9
Nitab4.5_0001242g0070 Nicotiana tabacum HOM05D004951 ORTHO05D005840 5.4e-53 211.8 228 50.4
TPR.G15148 Trifolium pratense HOM05D004951 ORTHO05D005840 7.0e-53 211.5 231 51.9
AL2G35650 Arabidopsis lyrata HOM05D004951 ORTHO05D005840 1.2e-52 210.7 195 51.8
Thhalv10019169m.g Eutrema salsugineum HOM05D004951 ORTHO05D005840 1.2e-52 210.7 195 53.3
Carub.0002s2250 Capsella rubella HOM05D004951 ORTHO05D005840 2.7e-52 209.5 195 52.8
AT1G75670 Arabidopsis thaliana HOM05D004951 ORTHO05D005840 3.5e-52 209.1 195 51.3
TWI34G1799 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 5.9e-52 208.4 229 47.2
CARHR069060 Cardamine hirsuta HOM05D004951 ORTHO05D005840 7.7e-52 208.0 195 52.3
Prupe.8G188100 Prunus persica HOM05D004951 ORTHO05D005840 1.0e-51 207.6 232 50.9
Medtr7g080860 Medicago truncatula HOM05D004951 ORTHO05D005840 1.7e-51 206.8 202 56.9
TWI56G1488 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 3.8e-51 205.7 227 48.9
RcHm_v2.0_Chr6g0282531 Rosa chinensis HOM05D004951 ORTHO05D005840 8.6e-51 204.5 199 54.8
TAR625G0428 Trochodendron aralioides HOM05D004951 ORTHO05D005840 8.6e-51 204.5 194 56.2
Atru.chr13.322 Acer truncatum HOM05D004951 ORTHO05D005840 2.5e-50 203.0 197 56.9
FvH4_2g17590 Fragaria vesca HOM05D004951 ORTHO05D005840 2.5e-50 203.0 198 54.0
FAN15G2157 Fragaria x ananassa HOM05D004951 ORTHO05D005840 2.5e-50 203.0 198 54.0
FAN24G1417 Fragaria x ananassa HOM05D004951 ORTHO05D005840 2.5e-50 203.0 198 54.0
BcaC03g15607 Brassica carinata HOM05D004951 ORTHO05D005840 3.3e-50 202.6 197 50.3
BolC2t09323H Brassica oleracea HOM05D004951 ORTHO05D005840 3.3e-50 202.6 197 50.3
SalBow8G2430 Salvia bowleyana HOM05D004951 ORTHO05D005840 3.3e-50 202.6 230 48.7
A02p20120 Brassica napus HOM05D004951 ORTHO05D005840 5.5e-50 201.8 189 51.9
Sp5g30770 Schrenkiella parvula HOM05D004951 ORTHO05D005840 5.5e-50 201.8 189 52.9
C02p33810 Brassica napus HOM05D004951 ORTHO05D005840 7.2e-50 201.4 189 51.3
BraA02t07047Z Brassica rapa HOM05D004951 ORTHO05D005840 7.2e-50 201.4 197 50.3
Aqoxy3G00621 Aquilegia oxysepala HOM05D004951 ORTHO05D005840 9.5e-50 201.1 250 46.8
Migut.G00984 Erythranthe guttata HOM05D004951 ORTHO05D005840 2.1e-49 199.9 200 51.0
Peaxi162Scf00186g00023 Petunia axillaris HOM05D004951 ORTHO05D005840 4.7e-49 198.7 247 44.9
SGA_v2.0_scaffold11G05895 Striga asiatica HOM05D004951 ORTHO05D005840 1.0e-48 197.6 198 51.5
FAN27G0910 Fragaria x ananassa HOM05D004951 ORTHO05D005840 1.4e-48 197.2 216 50.9
Nitab4.5_0014171g0010 Nicotiana tabacum HOM05D004951 ORTHO05D005840 1.4e-48 197.2 257 44.7
CDE12G0586 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 1.8e-48 196.8 183 54.1
FAN15G3167 Fragaria x ananassa HOM05D004951 ORTHO05D005840 5.2e-48 195.3 188 53.7
Sed0010580 Sechium edule HOM05D004951 ORTHO05D005840 8.9e-48 194.5 198 51.5
BcaC08g47055 Brassica carinata HOM05D004951 ORTHO05D005840 1.2e-47 194.1 185 51.9
Migut.C00815 Erythranthe guttata HOM05D004951 ORTHO05D005840 4.4e-47 192.2 180 53.3
HPP92_017328 Vanilla planifolia HOM05D004951 ORTHO05D005840 4.4e-47 192.2 229 48.0
Nn1g08637 Nelumbo nucifera HOM05D004951 ORTHO05D005840 3.7e-46 189.1 153 60.1
CDE05G3598 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 1.1e-45 187.6 183 51.4
Actinidia28598 Actinidia chinensis HOM05D004951 ORTHO05D005840 4.1e-45 185.7 199 52.8
Haze_22610 Corylus avellana HOM05D004951 ORTHO05D005840 3.3e-42 176.0 248 44.0
DCAR_008455 Daucus carota HOM05D004951 ORTHO05D005840 9.5e-42 174.5 161 52.8
Gohir.A02G093500 Gossypium hirsutum HOM05D004951 ORTHO05D005840 3.6e-41 172.6 143 59.4
Lalb_Chr01g0021631 Lupinus albus HOM05D004951 ORTHO05D005840 4.0e-40 169.1 201 47.3
BcaB05g24929 Brassica carinata HOM05D000120 ORTHO05D000068 2.6e-39 166.4 161 52.2
Oeu024522.1 Olea europaea HOM05D004951 ORTHO05D005840 2.6e-39 166.4 150 58.0
Os12g0533600 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 2.9e-38 162.9 175 51.4
Lj4A795G31 Lonicera japonica HOM05D004951 ORTHO05D005840 7.0e-37 158.3 136 59.6
unitig_8.g4914 Utricularia gibba HOM05D004951 ORTHO05D005840 2.0e-36 156.8 198 45.5
Os06g0168400 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 1.7e-35 153.7 155 53.5
Zm00001eb410680 Zea mays HOM05D004951 ORTHO05D005840 6.6e-35 151.8 206 44.2
CAN.G230.10 Capsicum annuum HOM05D004951 ORTHO05D005840 3.3e-34 149.4 139 56.8
MBI05_g38365_MAGBIO Magnolia biondii HOM05D004951 ORTHO05D005840 3.3e-34 149.4 232 39.2
ATR0068G029 Amborella trichopoda HOM05D004951 ORTHO05D005840 4.3e-34 149.1 231 41.1
SEGI_29847 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 4.7e-33 145.6 217 41.5
Mapoly0115s0026 Marchantia polymorpha HOM05D004951 ORTHO05D005840 2.4e-29 133.3 201 40.8
Pp3c15_23380 Physcomitrium patens HOM05D004951 ORTHO05D005840 4.1e-29 132.5 180 42.8
AagrBONN_evm.TU.Sc2ySwM_368.3390 Anthoceros agrestis HOM05D004951 ORTHO05D005840 7.1e-29 131.7 179 43.6
AagrBONN_evm.TU.Sc2ySwM_344.4244 Anthoceros agrestis HOM05D004951 ORTHO05D005840 2.7e-28 129.8 195 40.5
SMO356G0424 Selaginella moellendorffii HOM05D004951 ORTHO05D005840 3.1e-24 116.3 176 42.6
PGSC0003DMG400019052 Solanum tuberosum HOM05D004951 ORTHO05D005840 6.6e-19 98.6 117 44.4
Sed0021847 Sechium edule HOM05D004951 ORTHO05D005840 8.6e-19 98.2 144 39.6
Hma1.2p1_2299F.1_g319190 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 1.2e-17 94.4 78 59.0
ATR0585G020 Amborella trichopoda HOM05D004951 ORTHO05D005840 4.0e-16 89.4 88 50.0
SEGI_15858 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 4.0e-16 89.4 88 50.0
Cre02.g086750 Chlamydomonas reinhardtii HOM05D004951 ORTHO05D005840 9.3e-13 78.2 181 31.5
CBR_g74690 Chara braunii HOM05D004951 ORTHO05D005840 1.4e-08 64.3 142 30.3
BolC6t40000H Brassica oleracea HOM05D004951 ORTHO05D005840 5.8e-07 58.9 61 44.3


User provided reference genes

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