Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g126290 Amaranthus hybridus HOM05D004848 ORTHO05D006859 1.8e-162 575.9 295 100.0
AUR62008037 Chenopodium quinoa HOM05D004848 ORTHO05D006859 3.1e-114 415.6 294 74.5
AUR62003215 Chenopodium quinoa HOM05D004848 ORTHO05D006859 1.4e-106 390.2 274 75.2
EL10Ac2g03656 Beta vulgaris HOM05D004848 ORTHO05D006859 2.2e-99 366.3 275 70.5
Hund22216 Selenicereus undatus HOM05D004848 ORTHO05D006859 1.3e-83 313.9 316 59.5
Sc12g0008200 Simmondsia chinensis HOM05D004848 ORTHO05D006859 1.9e-82 310.1 300 57.7
CSS0017265 Camellia sinensis var. sinensis HOM05D004848 ORTHO05D006859 4.0e-69 265.8 276 59.1
Dinv25912 Davidia involucrata HOM05D004848 ORTHO05D006859 5.3e-69 265.4 272 59.6
vmacro03521 Vaccinium macrocarpon HOM05D004848 ORTHO05D006859 9.9e-68 261.2 270 60.4
DCAR_007788 Daucus carota HOM05D004848 ORTHO05D006859 3.7e-62 242.7 271 53.9
Lsat_1_v5_gn_2_63860 Lactuca sativa HOM05D004848 ORTHO05D006859 2.4e-61 240.0 271 53.1
Rhsim13G0132200 Rhododendron simsii HOM05D004848 ORTHO05D006859 2.4e-61 240.0 273 55.3
TAR371G0760 Trochodendron aralioides HOM05D004848 ORTHO05D006859 2.4e-61 240.0 293 52.2
Actinidia22396 Actinidia chinensis HOM05D004848 ORTHO05D006859 1.1e-58 231.1 294 51.7
TAR371G0139 Trochodendron aralioides HOM05D004848 ORTHO05D006859 4.2e-58 229.2 293 50.5
TWI38G1208 Tripterygium wilfordii HOM05D004848 ORTHO05D006859 1.6e-57 227.3 277 51.6
Nn7g38150 Nelumbo nucifera HOM05D004848 ORTHO05D006859 2.7e-57 226.5 291 50.5
CiPaw.10G064700 Carya illinoinensis HOM05D004848 ORTHO05D006859 7.9e-57 224.9 293 49.1
MD05G1251700 Malus domestica HOM05D004848 ORTHO05D006859 1.1e-55 221.1 273 49.5
AT4G19900 Arabidopsis thaliana HOM05D004848 ORTHO05D006859 2.5e-55 219.9 277 49.5
COL.COLO4_30993 Corchorus olitorius HOM05D004848 ORTHO05D006859 5.6e-55 218.8 283 47.3
Cfa000710 Carpinus fangiana HOM05D004848 ORTHO05D006859 7.4e-55 218.4 274 49.3
Manes.16G057700 Manihot esculenta HOM05D004848 ORTHO05D006859 9.6e-55 218.0 279 48.7
MD10G1232500 Malus domestica HOM05D004848 ORTHO05D006859 1.3e-54 217.6 272 48.5
THA.LOC104806215 Tarenaya hassleriana HOM05D004848 ORTHO05D006859 1.1e-53 214.5 276 50.0
ClCG01G025720 Citrullus lanatus HOM05D004848 ORTHO05D006859 1.8e-53 213.8 305 46.2
Gohir.D05G148000 Gossypium hirsutum HOM05D004848 ORTHO05D006859 1.8e-53 213.8 275 48.7
RcHm_v2.0_Chr5g0020101 Rosa chinensis HOM05D004848 ORTHO05D006859 1.8e-53 213.8 274 48.9
Gorai.009G152200 Gossypium raimondii HOM05D004848 ORTHO05D006859 2.4e-53 213.4 275 48.7
Prupe.4G112000 Prunus persica HOM05D004848 ORTHO05D006859 2.4e-53 213.4 272 48.5
Thecc.06G143000 Theobroma cacao HOM05D004848 ORTHO05D006859 3.1e-53 213.0 276 46.4
PSO675G2729 Papaver somniferum HOM05D004848 ORTHO05D006859 9.0e-53 211.5 312 46.8
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 1.5e-52 210.7 280 48.6
CARHR226680 Cardamine hirsuta HOM05D004848 ORTHO05D006859 2.0e-52 210.3 297 47.5
CsaV3_6G052960 Cucumis sativus L. HOM05D004848 ORTHO05D006859 2.0e-52 210.3 305 46.2
Gohir.A05G145600 Gossypium hirsutum HOM05D004848 ORTHO05D006859 2.0e-52 210.3 305 44.9
Atru.chr10.533 Acer truncatum HOM05D004848 ORTHO05D006859 2.6e-52 209.9 296 49.3
MELO3C007013.2 Cucumis melo HOM05D004848 ORTHO05D006859 2.6e-52 209.9 305 45.9
HanXRQChr14g0447411 Helianthus annuus HOM05D004848 ORTHO05D006859 2.6e-52 209.9 288 47.2
PSO541G1718 Papaver somniferum HOM05D004848 ORTHO05D006859 3.4e-52 209.5 287 48.1
Thhalv10024627m.g Eutrema salsugineum HOM05D004848 ORTHO05D006859 4.5e-52 209.1 281 50.2
Atru.chr10.537 Acer truncatum HOM05D004848 ORTHO05D006859 7.6e-52 208.4 296 49.0
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 7.6e-52 208.4 274 47.8
Lalb_Chr03g0024651 Lupinus albus HOM05D004848 ORTHO05D006859 1.0e-51 208.0 272 47.4
AL7G34080 Arabidopsis lyrata HOM05D004848 ORTHO05D006859 2.9e-51 206.5 285 47.4
CANSAT35G1894 Cannabis sativa HOM05D004848 ORTHO05D006859 2.9e-51 206.5 279 48.7
Potri.015G122200 Populus trichocarpa HOM05D004848 ORTHO05D006859 3.8e-51 206.1 276 45.7
Sabra15G0138300 Salix brachista HOM05D004848 ORTHO05D006859 1.1e-50 204.5 272 46.3
Nitab4.5_0004246g0030 Nicotiana tabacum HOM05D004848 ORTHO05D006859 2.5e-50 203.4 269 47.2
EL10Ac5g12737 Beta vulgaris HOM05D004848 ORTHO05D006859 3.2e-50 203.0 269 46.5
A08p14580 Brassica napus HOM05D004848 ORTHO05D006859 3.2e-50 203.0 280 48.2
BraA08t33444Z Brassica rapa HOM05D004848 ORTHO05D006859 3.2e-50 203.0 280 48.2
C03p82150 Brassica napus HOM05D004848 ORTHO05D006859 4.2e-50 202.6 280 47.9
BolC3t20538H Brassica oleracea HOM05D004848 ORTHO05D006859 4.2e-50 202.6 280 47.9
Nitab4.5_0000818g0090 Nicotiana tabacum HOM05D004848 ORTHO05D006859 4.2e-50 202.6 269 46.8
Carub.0007s2131 Capsella rubella HOM05D004848 ORTHO05D006859 1.6e-49 200.7 283 47.7
FvH4_3g12290 Fragaria vesca HOM05D004848 ORTHO05D006859 1.6e-49 200.7 270 46.7
CAN.G149.35 Capsicum annuum HOM05D004848 ORTHO05D006859 2.1e-49 200.3 270 45.6
Duzib235G0624 Durio zibethinus HOM05D004848 ORTHO05D006859 2.1e-49 200.3 306 43.1
Aqoxy1G01449 Aquilegia oxysepala HOM05D004848 ORTHO05D006859 2.7e-49 199.9 303 41.6
BcaC01g00643 Brassica carinata HOM05D004848 ORTHO05D006859 2.7e-49 199.9 306 46.1
Ciclev10014513m.g Citrus clementina HOM05D004848 ORTHO05D006859 2.7e-49 199.9 265 50.2
FAN25G1789 Fragaria x ananassa HOM05D004848 ORTHO05D006859 2.7e-49 199.9 271 46.9
FAN16G1950 Fragaria x ananassa HOM05D004848 ORTHO05D006859 4.6e-49 199.1 271 46.5
Nitab4.5_0001288g0240 Nicotiana tabacum HOM05D004848 ORTHO05D006859 6.1e-49 198.7 271 46.1
Solyc02g068790.4 Solanum lycopersicum HOM05D004848 ORTHO05D006859 6.1e-49 198.7 269 46.5
Sopen02g017950 Solanum pennellii HOM05D004848 ORTHO05D006859 6.1e-49 198.7 269 46.5
SalBow6G5406 Salvia bowleyana HOM05D004848 ORTHO05D006859 7.9e-49 198.4 297 45.8
SalBow8G3445 Salvia bowleyana HOM05D004848 ORTHO05D006859 7.9e-49 198.4 297 45.8
MSTRG.13293 Avicennia marina HOM05D004848 ORTHO05D006859 2.3e-48 196.8 292 44.2
Duzib160G0177 Durio zibethinus HOM05D004848 ORTHO05D006859 5.1e-48 195.7 278 46.0
Peaxi162Scf00149g00052 Petunia axillaris HOM05D004848 ORTHO05D006859 5.1e-48 195.7 270 45.2
Sed0003868 Sechium edule HOM05D004848 ORTHO05D006859 5.7e-47 192.2 279 46.6
FAN21G0923 Fragaria x ananassa HOM05D004848 ORTHO05D006859 9.7e-47 191.4 271 46.1
BcaB03g11645 Brassica carinata HOM05D004848 ORTHO05D006859 3.7e-46 189.5 276 45.3
Cc09_g06070 Coffea canephora HOM05D004848 ORTHO05D006859 3.7e-46 189.5 269 45.4
Oeu056030.1 Olea europaea HOM05D004848 ORTHO05D006859 1.1e-45 188.0 270 45.2
Migut.M01981 Erythranthe guttata HOM05D004848 ORTHO05D006859 2.4e-45 186.8 272 46.3
Lj1A1145G19 Lonicera japonica HOM05D004848 ORTHO05D006859 5.3e-45 185.7 205 55.1
Phvul.011G025900 Phaseolus vulgaris HOM05D004848 ORTHO05D006859 1.2e-44 184.5 279 44.8
Cpa.g.sc135.8 Carica papaya HOM05D004848 ORTHO05D006859 3.4e-44 183.0 281 43.1
AUR62022464 Chenopodium quinoa HOM05D004848 ORTHO05D006859 4.5e-44 182.6 231 45.9
AUR62024532 Chenopodium quinoa HOM05D004848 ORTHO05D006859 2.2e-43 180.3 213 50.2
Phvul.002G098100 Phaseolus vulgaris HOM05D004848 ORTHO05D006859 1.1e-42 177.9 267 43.1
Medtr4g075580 Medicago truncatula HOM05D004848 ORTHO05D006859 9.4e-42 174.9 269 44.2
VMungo0251G2797 Vigna mungo HOM05D004848 ORTHO05D006859 2.1e-41 173.7 267 43.1
arahy.Tifrunner.gnm1.ann1.4Z5NYX Arachis hypogaea HOM05D004848 ORTHO05D006859 6.1e-41 172.2 279 43.4
arahy.Tifrunner.gnm1.ann1.84J3B2 Arachis hypogaea HOM05D004848 ORTHO05D006859 6.1e-41 172.2 278 42.8
Glyma.20G020100 Glycine max HOM05D004848 ORTHO05D006859 1.0e-40 171.4 288 42.4
TPR.G17182 Trifolium pratense HOM05D004848 ORTHO05D006859 1.0e-40 171.4 265 43.8
Psat7g178040 Pisum sativum HOM05D004848 ORTHO05D006859 6.7e-40 168.7 263 43.7
GSVIVG01012068001 Vitis vinifera HOM05D004848 ORTHO05D006859 6.7e-40 168.7 166 58.4
VMungo1127G1128 Vigna mungo HOM05D004848 ORTHO05D006859 1.1e-39 167.9 270 40.7
CiPaw.09G077200 Carya illinoinensis HOM05D004848 ORTHO05D006859 3.3e-39 166.4 291 42.3
Glyma.11G097851 Glycine max HOM05D004848 ORTHO05D006859 1.7e-38 164.1 275 38.9
Lalb_Chr16g0385221 Lupinus albus HOM05D004848 ORTHO05D006859 2.8e-38 163.3 289 39.1
CDE02G3340 Ceratophyllum demersum HOM05D004848 ORTHO05D006859 4.8e-38 162.5 289 39.4
Lj4g0026898 Lotus japonicus HOM05D004848 ORTHO05D006859 1.1e-37 161.4 268 41.8
arahy.Tifrunner.gnm1.ann1.RCL750 Arachis hypogaea HOM05D004848 ORTHO05D006859 2.4e-37 160.2 275 40.4
Medtr4g084060 Medicago truncatula HOM05D004848 ORTHO05D006859 2.4e-37 160.2 264 42.0
Psat7g130520 Pisum sativum HOM05D004848 ORTHO05D006859 2.0e-36 157.1 272 40.4
Ca_18763_v3 Cicer arietinum L. HOM05D004848 ORTHO05D006859 8.5e-35 151.8 273 40.3
MBI18_g11477_MAGBIO Magnolia biondii HOM05D004848 ORTHO05D006859 8.5e-35 151.8 299 38.5
Ca_08517_v3 Cicer arietinum L. HOM05D004848 ORTHO05D006859 1.9e-34 150.6 277 40.4
SGA_v2.0_scaffold175G39362 Striga asiatica HOM05D004848 ORTHO05D006859 1.9e-34 150.6 151 51.7
SHI34205 Sapria himalayana HOM05D004848 ORTHO05D006859 1.7e-30 137.5 269 37.5
HPP92_015950 Vanilla planifolia HOM05D004848 ORTHO05D006859 4.8e-30 136.0 258 36.0
QL11p016422 Quercus lobata HOM05D004848 ORTHO05D006859 3.1e-29 133.3 288 37.2
PGR042G2559 Punica granatum HOM05D004848 ORTHO05D006859 4.1e-29 132.9 176 46.0
unitig_21.g20196 Utricularia gibba HOM05D004848 ORTHO05D006859 1.7e-27 127.5 275 34.9
ATR0763G002 Amborella trichopoda HOM05D004848 ORTHO05D006859 2.9e-27 126.7 183 42.6
Zm00001eb324590 Zea mays HOM05D004848 ORTHO05D006859 9.4e-26 121.7 217 38.2
Os07g0567300 Oryza sativa ssp. japonica HOM05D004848 ORTHO05D006859 1.2e-25 121.3 303 33.0
CDE05G1435 Ceratophyllum demersum HOM05D004848 ORTHO05D006859 3.9e-24 116.3 269 35.7
TWI63G1813 Tripterygium wilfordii HOM05D004848 ORTHO05D006859 1.5e-23 114.4 189 41.8
Glyma.07G221700 Glycine max HOM05D004848 ORTHO05D006859 1.3e-22 111.3 150 44.7
SEGI_06238 Sequoiadendron giganteum HOM05D004848 ORTHO05D006859 3.8e-19 99.8 214 32.2
ECA238G4765 Erigeron canadensis HOM05D004848 ORTHO05D006859 1.1e-18 98.2 268 31.3
TPR.G20986 Trifolium pratense HOM05D004848 ORTHO05D006859 1.6e-17 94.4 94 52.1
AagrBONN_evm.TU.Sc2ySwM_344.2562 Anthoceros agrestis HOM05D004848 ORTHO05D006859 1.2e-09 68.2 232 30.6
arahy.Tifrunner.gnm1.ann1.DSI1DH Arachis hypogaea HOM05D004848 ORTHO05D006859 5.2e-08 62.8 138 34.8
Mapoly0045s0054 Marchantia polymorpha HOM05D004848 ORTHO05D006859 2.0e-07 60.8 94 38.3
VMungo1309G0455 Vigna mungo HOM05D010006 ORTHO05D009911 2.8e-06 57.0 82 40.2


User provided reference genes

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