Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g125930 Amaranthus hybridus HOM05D002293 ORTHO05D005475 3.2e-99 365.2 196 100.0
EL10Ac6g14774 Beta vulgaris HOM05D002293 ORTHO05D005475 1.8e-86 322.8 196 86.2
AUR62027167 Chenopodium quinoa HOM05D002293 ORTHO05D005475 5.4e-86 321.2 196 87.2
AUR62003295 Chenopodium quinoa HOM05D002293 ORTHO05D005475 1.6e-85 319.7 196 86.7
Sc03g0004490 Simmondsia chinensis HOM05D002293 ORTHO05D005475 2.0e-85 319.3 196 85.7
GSVIVG01022249001 Vitis vinifera HOM05D002293 ORTHO05D005475 4.5e-85 318.2 196 85.2
CiPaw.03G133000 Carya illinoinensis HOM05D002293 ORTHO05D005475 2.3e-84 315.8 196 84.7
CiPaw.04G090200 Carya illinoinensis HOM05D002293 ORTHO05D005475 2.3e-84 315.8 196 84.7
Sc16g0004130 Simmondsia chinensis HOM05D002293 ORTHO05D005475 2.9e-84 315.5 196 85.2
Dinv41022 Davidia involucrata HOM05D002293 ORTHO05D005475 2.5e-83 312.4 196 82.1
Dinv42674 Davidia involucrata HOM05D002293 ORTHO05D005475 3.3e-83 312.0 196 82.1
Eucgr.H04880 Eucalyptus grandis HOM05D002293 ORTHO05D005475 4.3e-83 311.6 196 83.7
Nn3g18603 Nelumbo nucifera HOM05D002293 ORTHO05D005475 5.6e-83 311.2 196 83.7
QL06p031785 Quercus lobata HOM05D002293 ORTHO05D005475 5.6e-83 311.2 195 83.6
TAR376G0974 Trochodendron aralioides HOM05D002293 ORTHO05D005475 7.3e-83 310.8 196 83.7
Ah.03g141640 Amaranthus hybridus HOM05D002293 ORTHO05D005475 9.5e-83 310.5 178 93.3
CSS0016943 Camellia sinensis var. sinensis HOM05D002293 ORTHO05D005475 9.5e-83 310.5 196 84.2
Oeu046075.1 Olea europaea HOM05D002293 ORTHO05D005475 9.5e-83 310.5 196 82.1
Actinidia12214 Actinidia chinensis HOM05D002293 ORTHO05D005475 1.2e-82 310.1 196 83.7
Hma1.2p1_2282F.1_g318820 Hydrangea macrophylla HOM05D002293 ORTHO05D005475 1.2e-82 310.1 196 83.2
Lj7A386T88 Lonicera japonica HOM05D002293 ORTHO05D005475 1.2e-82 310.1 196 82.7
TWI75G0492 Tripterygium wilfordii HOM05D002293 ORTHO05D005475 2.8e-82 308.9 196 83.2
Actinidia05381 Actinidia chinensis HOM05D002293 ORTHO05D005475 3.6e-82 308.5 196 83.2
vmacro08972 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 3.6e-82 308.5 196 82.1
Hund19634 Selenicereus undatus HOM05D002293 ORTHO05D005475 4.7e-82 308.1 196 83.7
Hma1.2p1_0358F.1_g134890 Hydrangea macrophylla HOM05D002293 ORTHO05D005475 6.1e-82 307.8 196 82.7
Lj2A567T21 Lonicera japonica HOM05D002293 ORTHO05D005475 6.1e-82 307.8 196 81.1
TWI31G0415 Tripterygium wilfordii HOM05D002293 ORTHO05D005475 8.0e-82 307.4 196 82.1
Prupe.6G169300 Prunus persica HOM05D002293 ORTHO05D005475 1.0e-81 307.0 196 81.6
Nn5g28871 Nelumbo nucifera HOM05D002293 ORTHO05D005475 1.4e-81 306.6 196 83.2
Cpa.g.sc72.4 Carica papaya HOM05D002293 ORTHO05D005475 6.8e-81 304.3 196 82.7
Manes.12G143700 Manihot esculenta HOM05D002293 ORTHO05D005475 6.8e-81 304.3 196 80.6
Haze_25060 Corylus avellana HOM05D002293 ORTHO05D005475 1.2e-80 303.5 196 80.6
MD01G1021000 Malus domestica HOM05D002293 ORTHO05D005475 2.0e-80 302.8 196 81.1
ClCG01G015980 Citrullus lanatus HOM05D002293 ORTHO05D005475 2.6e-80 302.4 196 80.1
PGR102G1541 Punica granatum HOM05D002293 ORTHO05D005475 2.6e-80 302.4 196 82.1
Cfa002767 Carpinus fangiana HOM05D002293 ORTHO05D005475 3.4e-80 302.0 196 80.6
RcHm_v2.0_Chr2g0117231 Rosa chinensis HOM05D002293 ORTHO05D005475 3.4e-80 302.0 196 80.6
Lsat_1_v5_gn_9_42461 Lactuca sativa HOM05D002293 ORTHO05D005475 9.8e-80 300.4 196 79.6
Sed0002744 Sechium edule HOM05D002293 ORTHO05D005475 9.8e-80 300.4 196 78.6
Duzib264G1168 Durio zibethinus HOM05D002293 ORTHO05D005475 2.2e-79 299.3 196 81.1
Thecc.01G115200 Theobroma cacao HOM05D002293 ORTHO05D005475 2.9e-79 298.9 196 80.6
ATR0736G207 Amborella trichopoda HOM05D002293 ORTHO05D005475 3.7e-79 298.5 196 80.6
MSTRG.24489 Avicennia marina HOM05D002293 ORTHO05D005475 3.7e-79 298.5 196 80.1
MD15G1331100 Malus domestica HOM05D002293 ORTHO05D005475 3.7e-79 298.5 196 80.1
CANSAT01G0963 Cannabis sativa HOM05D002293 ORTHO05D005475 4.9e-79 298.1 196 81.1
Ciclev10026373m.g Citrus clementina HOM05D002293 ORTHO05D005475 4.9e-79 298.1 196 81.1
CsaV3_6G042260 Cucumis sativus L. HOM05D002293 ORTHO05D005475 6.4e-79 297.7 196 78.1
Duzib187G0135 Durio zibethinus HOM05D002293 ORTHO05D005475 6.4e-79 297.7 196 81.6
Migut.N02943 Erythranthe guttata HOM05D002293 ORTHO05D005475 6.4e-79 297.7 196 79.6
Gohir.A11G054000 Gossypium hirsutum HOM05D002293 ORTHO05D005475 1.4e-78 296.6 196 81.1
Gohir.D11G057500 Gossypium hirsutum HOM05D002293 ORTHO05D005475 1.4e-78 296.6 196 81.1
Aqoxy6G00441 Aquilegia oxysepala HOM05D002293 ORTHO05D005475 1.9e-78 296.2 196 80.1
FAN28G2749 Fragaria x ananassa HOM05D002293 ORTHO05D005475 1.9e-78 296.2 196 80.1
MELO3C007468.2 Cucumis melo HOM05D002293 ORTHO05D005475 2.4e-78 295.8 196 77.6
Atru.chr4.451 Acer truncatum HOM05D002293 ORTHO05D005475 4.1e-78 295.0 196 78.6
Gohir.D11G228400 Gossypium hirsutum HOM05D002293 ORTHO05D005475 4.1e-78 295.0 196 79.6
FvH4_1g22890 Fragaria vesca HOM05D002293 ORTHO05D005475 5.4e-78 294.7 196 79.6
FAN26G3412 Fragaria x ananassa HOM05D002293 ORTHO05D005475 7.0e-78 294.3 196 79.1
FAN19G1282 Fragaria x ananassa HOM05D002293 ORTHO05D005475 1.2e-77 293.5 196 79.6
FAN23G0553 Fragaria x ananassa HOM05D002293 ORTHO05D005475 1.2e-77 293.5 196 79.1
PSO541G6166 Papaver somniferum HOM05D002293 ORTHO05D005475 1.6e-77 293.1 196 78.6
PSO675G2787 Papaver somniferum HOM05D002293 ORTHO05D005475 1.6e-77 293.1 196 78.6
SGA_v2.0_scaffold364G49965 Striga asiatica HOM05D002293 ORTHO05D005475 2.7e-77 292.4 196 77.0
Gorai.007G062700 Gossypium raimondii HOM05D002293 ORTHO05D005475 3.5e-77 292.0 196 80.1
HanXRQChr04g0115601 Helianthus annuus HOM05D002293 ORTHO05D005475 3.5e-77 292.0 196 79.1
Lsat_1_v5_gn_1_5861 Lactuca sativa HOM05D002293 ORTHO05D005475 4.6e-77 291.6 196 79.1
Gohir.A11G196900 Gossypium hirsutum HOM05D002293 ORTHO05D005475 6.0e-77 291.2 196 79.1
ECA247G2680 Erigeron canadensis HOM05D002293 ORTHO05D005475 7.8e-77 290.8 196 78.1
Rhsim08G0005300 Rhododendron simsii HOM05D002293 ORTHO05D005475 7.8e-77 290.8 237 69.2
HanXRQChr02g0042411 Helianthus annuus HOM05D002293 ORTHO05D005475 3.9e-76 288.5 196 78.1
Nn2g12418 Nelumbo nucifera HOM05D002293 ORTHO05D005475 6.6e-76 287.7 181 83.4
Dinv19470 Davidia involucrata HOM05D002293 ORTHO05D005475 5.6e-75 284.6 175 84.0
SalBow6G4022 Salvia bowleyana HOM05D002293 ORTHO05D005475 9.5e-75 283.9 196 75.0
Sabra07G0066700 Salix brachista HOM05D002293 ORTHO05D005475 3.6e-74 282.0 196 75.0
VMungo0251G0649 Vigna mungo HOM05D002293 ORTHO05D005475 8.0e-74 280.8 197 74.1
Glyma.05G184800 Glycine max HOM05D002293 ORTHO05D005475 1.4e-73 280.0 197 74.6
Thhalv10000307m.g Eutrema salsugineum HOM05D002293 ORTHO05D005475 2.3e-73 279.3 196 73.5
unitig_8.g4827 Utricularia gibba HOM05D002293 ORTHO05D005475 2.3e-73 279.3 196 74.5
Glyma.08G142800 Glycine max HOM05D002293 ORTHO05D005475 3.1e-73 278.9 197 74.6
SGA_v2.0_scaffold54G19692 Striga asiatica HOM05D002293 ORTHO05D005475 4.0e-73 278.5 196 76.0
Sp4g00960 Schrenkiella parvula HOM05D002293 ORTHO05D005475 6.8e-73 277.7 196 72.4
Potri.007G079500 Populus trichocarpa HOM05D002293 ORTHO05D005475 1.2e-72 276.9 196 73.5
THA.LOC104807725 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 1.2e-72 276.9 196 75.5
BcaB06g27791 Brassica carinata HOM05D002293 ORTHO05D005475 1.5e-72 276.6 196 71.9
arahy.Tifrunner.gnm1.ann1.LE5EW2 Arachis hypogaea HOM05D002293 ORTHO05D005475 2.0e-72 276.2 196 74.0
Lalb_Chr07g0184761 Lupinus albus HOM05D002293 ORTHO05D005475 2.6e-72 275.8 196 73.5
AT2G21870 Arabidopsis thaliana HOM05D002293 ORTHO05D005475 4.4e-72 275.0 196 71.4
BolC4t26688H Brassica oleracea HOM05D002293 ORTHO05D005475 4.4e-72 275.0 195 71.3
Lj4g0016673 Lotus japonicus HOM05D002293 ORTHO05D005475 4.4e-72 275.0 197 74.6
arahy.Tifrunner.gnm1.ann1.GC7XSK Arachis hypogaea HOM05D002293 ORTHO05D005475 5.8e-72 274.6 196 73.5
A04p16460 Brassica napus HOM05D002293 ORTHO05D005475 5.8e-72 274.6 196 71.4
BraA04t17281Z Brassica rapa HOM05D002293 ORTHO05D005475 5.8e-72 274.6 196 71.4
THA.LOC104824852 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 5.8e-72 274.6 196 74.0
Ca_17689_v3 Cicer arietinum L. HOM05D002293 ORTHO05D005475 9.8e-72 273.9 197 74.1
Phvul.002G265700 Phaseolus vulgaris HOM05D002293 ORTHO05D005475 9.8e-72 273.9 197 73.1
HPP92_010855 Vanilla planifolia HOM05D002293 ORTHO05D005475 9.8e-72 273.9 196 73.5
AL4G11180 Arabidopsis lyrata HOM05D002293 ORTHO05D005475 1.3e-71 273.5 196 70.9
BcaB08g35009 Brassica carinata HOM05D002293 ORTHO05D005475 1.3e-71 273.5 196 71.4
BcaC02g08759 Brassica carinata HOM05D002293 ORTHO05D005475 1.3e-71 273.5 196 71.4
C04p50970 Brassica napus HOM05D002293 ORTHO05D005475 1.3e-71 273.5 196 71.4
THA.LOC104804134 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 1.3e-71 273.5 196 73.0
Duzib147G0641 Durio zibethinus HOM05D002293 ORTHO05D005475 1.7e-71 273.1 175 82.3
DCAR_019970 Daucus carota HOM05D002293 ORTHO05D005475 2.2e-71 272.7 196 73.0
BcaC07g41114 Brassica carinata HOM05D002293 ORTHO05D005475 2.9e-71 272.3 196 70.9
C08p41150 Brassica napus HOM05D002293 ORTHO05D005475 2.9e-71 272.3 196 70.9
BolC8t51682H Brassica oleracea HOM05D002293 ORTHO05D005475 2.9e-71 272.3 196 70.9
BraA09t41184Z Brassica rapa HOM05D002293 ORTHO05D005475 2.9e-71 272.3 196 70.9
Aa31LG7G14740 Aethionema arabicum HOM05D002293 ORTHO05D005475 4.9e-71 271.6 196 70.4
Oeu061454.1 Olea europaea HOM05D002293 ORTHO05D005475 4.9e-71 271.6 248 62.1
Lalb_Chr12g0203481 Lupinus albus HOM05D002293 ORTHO05D005475 6.4e-71 271.2 196 73.0
Potri.005G085500 Populus trichocarpa HOM05D002293 ORTHO05D005475 6.4e-71 271.2 196 73.0
Zm00001eb231220 Zea mays HOM05D002293 ORTHO05D005475 6.4e-71 271.2 196 72.4
A09p57920 Brassica napus HOM05D002293 ORTHO05D005475 1.1e-70 270.4 196 70.9
Gorai.007G246300 Gossypium raimondii HOM05D002293 ORTHO05D005475 1.4e-70 270.0 175 81.1
Carub.0004s0090 Capsella rubella HOM05D002293 ORTHO05D005475 2.4e-70 269.2 196 70.4
Zm00001eb209000 Zea mays HOM05D002293 ORTHO05D005475 2.4e-70 269.2 196 71.9
TPR.G20796 Trifolium pratense HOM05D002293 ORTHO05D005475 3.2e-70 268.9 197 74.6
CARHR112910 Cardamine hirsuta HOM05D002293 ORTHO05D005475 4.1e-70 268.5 196 69.4
Medtr8g092040 Medicago truncatula HOM05D002293 ORTHO05D005475 5.4e-70 268.1 197 72.6
CAN.G1252.8 Capsicum annuum HOM05D002293 ORTHO05D005475 1.1e-67 260.4 196 71.4
Solyc04g072047.1 Solanum lycopersicum HOM05D002293 ORTHO05D005475 1.2e-66 256.9 196 69.4
Sopen04g028170 Solanum pennellii HOM05D002293 ORTHO05D005475 1.2e-66 256.9 196 69.4
PGSC0003DMG400025052 Solanum tuberosum HOM05D002293 ORTHO05D005475 1.2e-66 256.9 196 69.9
Nitab4.5_0004252g0010 Nicotiana tabacum HOM05D002293 ORTHO05D005475 1.4e-65 253.4 211 67.3
Nitab4.5_0001000g0170 Nicotiana tabacum HOM05D002293 ORTHO05D005475 1.8e-65 253.1 211 67.3
Glyma.14G174100 Glycine max HOM05D002293 ORTHO05D005475 4.0e-65 251.9 175 74.3
Sabra05G0070400 Salix brachista HOM05D002293 ORTHO05D005475 8.9e-65 250.8 245 58.8
COL.COLO4_10988 Corchorus olitorius HOM05D002293 ORTHO05D005475 5.1e-60 235.0 188 66.0
Hund03526 Selenicereus undatus HOM05D002293 ORTHO05D005475 1.9e-59 233.0 175 74.3
TAR625G1205 Trochodendron aralioides HOM05D002293 ORTHO05D005475 8.9e-57 224.2 196 64.3
TAR381G0840 Trochodendron aralioides HOM05D002293 ORTHO05D005475 2.9e-55 219.2 134 83.6
Haze_25047 Corylus avellana HOM05D002293 ORTHO05D005475 2.7e-53 212.6 134 79.1
Psat0s281g0080 Pisum sativum HOM05D002293 ORTHO05D005475 1.0e-52 210.7 197 61.4
Peaxi162Scf17813g00005 Petunia axillaris HOM05D002293 ORTHO05D005475 3.6e-50 202.2 155 70.3
Zm00001eb114730 Zea mays HOM05D002293 ORTHO05D005475 1.7e-47 193.4 155 65.8
CDE04G0337 Ceratophyllum demersum HOM05D002293 ORTHO05D005475 2.3e-44 183.0 165 62.4
Rhsim10G0148500 Rhododendron simsii HOM05D002293 ORTHO05D005475 2.4e-38 162.9 149 61.1
Lalb_Chr13g0296261 Lupinus albus HOM05D002293 ORTHO05D005475 2.1e-37 159.8 112 74.1
Mapoly0014s0184 Marchantia polymorpha HOM05D002293 ORTHO05D005475 9.3e-30 134.4 196 39.8
Nn8g40924 Nelumbo nucifera HOM05D002293 ORTHO05D005475 1.8e-28 130.2 183 49.2
vmacro12893 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 8.7e-28 127.9 134 58.2
AagrBONN_evm.TU.Sc2ySwM_117.3341 Anthoceros agrestis HOM05D002293 ORTHO05D005475 4.3e-27 125.6 196 35.7
Lalb_Chr13g0296251 Lupinus albus HOM05D002293 ORTHO05D005475 8.2e-26 121.3 85 71.8
HPP92_010897 Vanilla planifolia HOM05D002293 ORTHO05D005475 2.4e-25 119.8 131 54.2
Pp3c9_7910 Physcomitrium patens HOM05D002293 ORTHO05D005475 1.7e-23 113.6 196 35.2
vmacro18642 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 4.9e-23 112.1 236 37.7
CBR_g39756 Chara braunii HOM05D002293 ORTHO05D005475 1.8e-20 103.6 176 35.8
CBR_g72646 Chara braunii HOM05D002293 ORTHO05D005475 1.5e-19 100.5 190 33.2
unitig_744.g24089 Utricularia gibba HOM05D002293 ORTHO05D005475 1.1e-14 84.3 63 71.4
Gohir.D08G112008 Gossypium hirsutum HOM05D001556 ORTHO05D005475 2.7e-13 79.7 64 64.1
ATR0736G144 Amborella trichopoda HOM05D006066 ORTHO05D007720 6.1e-13 78.6 48 83.3
Nn2g12848 Nelumbo nucifera HOM05D002293 ORTHO05D005475 6.1e-13 78.6 156 42.3
Peaxi162Scf00226g00011 Petunia axillaris HOM05D002293 ORTHO05D005475 1.0e-12 77.8 52 73.1
SEGI_39212 Sequoiadendron giganteum HOM05D002293 ORTHO05D005475 4.8e-10 68.9 64 60.9


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