Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 8.1e-38 159.8 77 100.0
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 1.8e-21 105.5 74 64.9
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 9.3e-18 93.2 50 76.0
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 1.5e-15 85.9 68 61.8
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 1.9e-15 85.5 64 65.6
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 1.9e-15 85.5 63 66.7
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 2.5e-15 85.1 43 79.1
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 2.5e-15 85.1 69 58.0
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 4.3e-15 84.3 51 70.6
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 4.3e-15 84.3 51 68.6
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 5.7e-15 84.0 55 67.3
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 7.4e-15 83.6 76 53.9
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 7.4e-15 83.6 72 58.3
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 1.3e-14 82.8 69 58.0
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 2.2e-14 82.0 63 61.9
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 2.2e-14 82.0 63 61.9
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 2.2e-14 82.0 63 61.9
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 2.2e-14 82.0 62 66.1
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 3.7e-14 81.3 74 55.4
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 4.8e-14 80.9 38 81.6
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 4.8e-14 80.9 76 50.0
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 8.2e-14 80.1 54 66.7
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 1.1e-13 79.7 76 52.6
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 1.1e-13 79.7 63 60.3
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 1.1e-13 79.7 63 60.3
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 1.1e-13 79.7 68 57.4
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 1.4e-13 79.3 72 54.2
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 1.4e-13 79.3 74 55.4
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 3.1e-13 78.2 70 57.1
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 3.1e-13 78.2 55 58.2
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 4.1e-13 77.8 69 58.0
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 4.1e-13 77.8 78 53.8
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 4.1e-13 77.8 41 73.2
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 9.1e-13 76.6 63 58.7
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 9.1e-13 76.6 72 55.6
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 9.1e-13 76.6 39 76.9
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 1.2e-12 76.3 52 65.4
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 1.2e-12 76.3 76 55.3
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 1.2e-12 76.3 78 52.6
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 1.5e-12 75.9 63 52.4
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 2.0e-12 75.5 70 52.9
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 2.6e-12 75.1 64 56.2
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 2.6e-12 75.1 52 63.5
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 2.6e-12 75.1 55 56.4
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 2.6e-12 75.1 55 56.4
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 3.4e-12 74.7 45 66.7
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 3.4e-12 74.7 76 51.3
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 4.5e-12 74.3 78 52.6
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 4.5e-12 74.3 60 58.3
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 7.7e-12 73.6 71 47.9
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 7.7e-12 73.6 40 72.5
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 7.7e-12 73.6 56 58.9
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 7.7e-12 73.6 60 58.3
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 1.0e-11 73.2 39 79.5
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 1.0e-11 73.2 78 47.4
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 1.0e-11 73.2 59 55.9
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 1.3e-11 72.8 31 93.5
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 1.3e-11 72.8 31 93.5
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 1.3e-11 72.8 75 52.0
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 1.7e-11 72.4 71 50.7
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 1.7e-11 72.4 71 50.7
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 2.2e-11 72.0 34 82.4
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 2.2e-11 72.0 47 66.0
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 2.2e-11 72.0 45 68.9
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 2.9e-11 71.6 34 82.4
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 2.9e-11 71.6 70 50.0
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 2.9e-11 71.6 61 54.1
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 3.8e-11 71.2 82 45.1
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 5.0e-11 70.9 40 75.0
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 6.5e-11 70.5 39 74.4
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 8.5e-11 70.1 52 65.4
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 1.1e-10 69.7 71 50.7
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 1.1e-10 69.7 59 52.5
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 1.1e-10 69.7 31 87.1
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 1.4e-10 69.3 38 76.3
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.4e-10 69.3 63 55.6
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 1.4e-10 69.3 63 55.6
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 1.4e-10 69.3 37 73.0
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 1.4e-10 69.3 33 84.8
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 1.9e-10 68.9 33 81.8
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 2.5e-10 68.6 58 55.2
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 3.2e-10 68.2 65 56.9
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 4.2e-10 67.8 33 81.8
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 5.5e-10 67.4 58 56.9
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 5.5e-10 67.4 68 47.1
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 7.2e-10 67.0 39 66.7
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 9.4e-10 66.6 79 44.3
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 1.2e-09 66.2 31 83.9
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 2.7e-09 65.1 31 80.6
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 2.7e-09 65.1 76 47.4
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 3.6e-09 64.7 31 77.4
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 3.6e-09 64.7 41 63.4
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 4.6e-09 64.3 32 78.1
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 6.1e-09 63.9 58 56.9
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 1.8e-08 62.4 65 50.8
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 1.8e-08 62.4 66 48.5
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 2.3e-08 62.0 71 46.5
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 3.9e-08 61.2 30 70.0
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 3.9e-08 61.2 31 71.0
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 5.1e-08 60.8 52 50.0
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 6.7e-08 60.5 52 50.0
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 7.4e-07 57.0 73 46.6
Pp3c10_3490 Physcomitrium patens HOM05D007510 ORTHO05D009587 7.4e-07 57.0 55 49.1
Dinv40044 Davidia involucrata HOM05D007510 ORTHO05D009587 6.3e-06 53.9 55 49.1


User provided reference genes

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