Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g124640 Amaranthus hybridus HOM05D005603 ORTHO05D006944 7.3e-250 866.7 415 100.0
AUR62007651 Chenopodium quinoa HOM05D005603 ORTHO05D006944 6.5e-182 641.0 408 77.2
EL10As8g23850 Beta vulgaris HOM05D005603 ORTHO05D006944 6.9e-176 620.9 391 77.7
Sc03g0003440 Simmondsia chinensis HOM05D005603 ORTHO05D006944 9.1e-176 620.5 397 75.6
Hund14030 Selenicereus undatus HOM05D005603 ORTHO05D006944 1.2e-175 620.2 406 74.1
Manes.02G101300 Manihot esculenta HOM05D005603 ORTHO05D006944 1.5e-175 619.8 395 76.7
QL06p033966 Quercus lobata HOM05D005603 ORTHO05D006944 2.2e-174 615.9 395 75.9
Hund16476 Selenicereus undatus HOM05D005603 ORTHO05D006944 1.1e-173 613.6 437 70.5
CANSAT01G2298 Cannabis sativa HOM05D005603 ORTHO05D006944 3.2e-173 612.1 399 75.4
TWI09G0997 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 7.2e-173 610.9 402 73.4
MELO3C007885.2 Cucumis melo HOM05D005603 ORTHO05D006944 4.7e-172 608.2 393 74.3
ClCG01G020120 Citrullus lanatus HOM05D005603 ORTHO05D006944 7.9e-172 607.4 389 75.1
CsaV3_6G046890 Cucumis sativus L. HOM05D005603 ORTHO05D006944 1.4e-171 606.7 393 74.0
Aqoxy5G01490 Aquilegia oxysepala HOM05D005603 ORTHO05D006944 1.1e-170 603.6 406 72.7
HanXRQChr16g0531111 Helianthus annuus HOM05D005603 ORTHO05D006944 1.5e-170 603.2 396 74.0
Nitab4.5_0008176g0030 Nicotiana tabacum HOM05D005603 ORTHO05D006944 4.4e-170 601.7 411 71.5
Thecc.01G023100 Theobroma cacao HOM05D005603 ORTHO05D006944 4.4e-170 601.7 392 74.5
CiPaw.07G056000 Carya illinoinensis HOM05D005603 ORTHO05D006944 5.7e-170 601.3 392 75.3
TPR.G2333 Trifolium pratense HOM05D005603 ORTHO05D006944 5.7e-170 601.3 397 72.8
Nn5g29214 Nelumbo nucifera HOM05D005603 ORTHO05D006944 7.4e-170 600.9 394 73.4
Prupe.7G165200 Prunus persica HOM05D005603 ORTHO05D006944 7.4e-170 600.9 395 73.7
Eucgr.I02369 Eucalyptus grandis HOM05D005603 ORTHO05D006944 1.7e-169 599.7 395 74.2
Glyma.01G168600 Glycine max HOM05D005603 ORTHO05D006944 1.7e-169 599.7 397 72.8
Potri.007G015800 Populus trichocarpa HOM05D005603 ORTHO05D006944 4.8e-169 598.2 398 74.1
Sopen02g029190 Solanum pennellii HOM05D005603 ORTHO05D006944 4.8e-169 598.2 396 73.5
MD15G1249000 Malus domestica HOM05D005603 ORTHO05D006944 6.3e-169 597.8 394 73.1
VMungo1215G2039 Vigna mungo HOM05D005603 ORTHO05D006944 6.3e-169 597.8 397 72.8
Ca_24898_v3 Cicer arietinum L. HOM05D005603 ORTHO05D006944 8.2e-169 597.4 397 72.3
Sed0002868 Sechium edule HOM05D005603 ORTHO05D006944 1.8e-168 596.3 391 73.4
Glyma.11G074800 Glycine max HOM05D005603 ORTHO05D006944 5.3e-168 594.7 397 72.5
Psat2g155920 Pisum sativum HOM05D005603 ORTHO05D006944 7.0e-168 594.3 397 72.3
Phvul.002G111500 Phaseolus vulgaris HOM05D005603 ORTHO05D006944 1.2e-167 593.6 397 72.3
SGA_v2.0_scaffold47G17673 Striga asiatica HOM05D005603 ORTHO05D006944 1.2e-167 593.6 402 71.4
FvH4_1g12160 Fragaria vesca HOM05D005603 ORTHO05D006944 1.6e-167 593.2 395 72.4
Medtr5g021520 Medicago truncatula HOM05D005603 ORTHO05D006944 1.6e-167 593.2 398 72.1
arahy.Tifrunner.gnm1.ann1.V913IW Arachis hypogaea HOM05D005603 ORTHO05D006944 2.0e-167 592.8 397 72.8
Ciclev10025760m.g Citrus clementina HOM05D005603 ORTHO05D006944 2.0e-167 592.8 406 71.4
TAR628G0819 Trochodendron aralioides HOM05D005603 ORTHO05D006944 2.0e-167 592.8 395 73.2
MSTRG.15764 Avicennia marina HOM05D005603 ORTHO05D006944 3.5e-167 592.0 395 72.7
DCAR_021493 Daucus carota HOM05D005603 ORTHO05D006944 5.9e-167 591.3 393 72.3
CSS0040106 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 7.7e-167 590.9 396 73.2
Lsat_1_v5_gn_3_73720 Lactuca sativa HOM05D005603 ORTHO05D006944 1.0e-166 590.5 395 72.9
Hma1.2p1_0743F.1_g211450 Hydrangea macrophylla HOM05D005603 ORTHO05D006944 1.3e-166 590.1 407 72.2
Thhalv10010418m.g Eutrema salsugineum HOM05D005603 ORTHO05D006944 2.2e-166 589.3 392 71.9
Potri.005G117200 Populus trichocarpa HOM05D005603 ORTHO05D006944 2.9e-166 589.0 388 74.5
MD02G1111100 Malus domestica HOM05D005603 ORTHO05D006944 3.8e-166 588.6 394 72.1
TAR376G0194 Trochodendron aralioides HOM05D005603 ORTHO05D006944 3.8e-166 588.6 395 72.9
Carub.0005s1753 Capsella rubella HOM05D005603 ORTHO05D006944 1.1e-165 587.0 392 71.4
CDE05G2538 Ceratophyllum demersum HOM05D005603 ORTHO05D006944 1.1e-165 587.0 395 72.4
Lj2g0023828 Lotus japonicus HOM05D005603 ORTHO05D006944 1.5e-165 586.6 402 71.4
PGSC0003DMG400003547 Solanum tuberosum HOM05D005603 ORTHO05D006944 1.9e-165 586.3 387 73.4
Peaxi162Scf00083g01233 Petunia axillaris HOM05D005603 ORTHO05D006944 2.5e-165 585.9 395 72.7
THA.LOC104819186 Tarenaya hassleriana HOM05D005603 ORTHO05D006944 3.2e-165 585.5 392 72.4
Nitab4.5_0000912g0020 Nicotiana tabacum HOM05D005603 ORTHO05D006944 9.4e-165 583.9 402 71.1
RcHm_v2.0_Chr2g0099911 Rosa chinensis HOM05D005603 ORTHO05D006944 9.4e-165 583.9 395 72.2
Sabra05G0096200 Salix brachista HOM05D005603 ORTHO05D006944 9.4e-165 583.9 388 73.5
AT3G51130 Arabidopsis thaliana HOM05D005603 ORTHO05D006944 1.6e-164 583.2 392 71.4
ECA246G4842 Erigeron canadensis HOM05D005603 ORTHO05D006944 2.7e-164 582.4 386 72.8
Migut.L00039 Erythranthe guttata HOM05D005603 ORTHO05D006944 2.7e-164 582.4 396 72.0
GSVIVG01018824001 Vitis vinifera HOM05D005603 ORTHO05D006944 2.7e-164 582.4 385 73.8
arahy.Tifrunner.gnm1.ann1.8YZ064 Arachis hypogaea HOM05D005603 ORTHO05D006944 3.6e-164 582.0 426 67.8
AL5G31550 Arabidopsis lyrata HOM05D005603 ORTHO05D006944 4.7e-164 581.6 392 71.2
Cc07_g10420 Coffea canephora HOM05D005603 ORTHO05D006944 4.7e-164 581.6 386 73.3
PSO541G2355 Papaver somniferum HOM05D005603 ORTHO05D006944 4.7e-164 581.6 397 70.8
PSO675G2068 Papaver somniferum HOM05D005603 ORTHO05D006944 4.7e-164 581.6 397 70.8
Aa31LG4G19220 Aethionema arabicum HOM05D005603 ORTHO05D006944 6.1e-164 581.3 392 71.4
Os06g0714000 Oryza sativa ssp. japonica HOM05D005603 ORTHO05D006944 8.0e-164 580.9 394 72.6
HPP92_025419 Vanilla planifolia HOM05D005603 ORTHO05D006944 4.0e-163 578.6 395 71.9
Sp5g11080 Schrenkiella parvula HOM05D005603 ORTHO05D006944 6.7e-163 577.8 392 71.7
CSS0042462 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 8.8e-163 577.4 404 70.8
Oeu035330.1 Olea europaea HOM05D005603 ORTHO05D006944 8.8e-163 577.4 396 71.2
CSS0001882 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 4.4e-162 575.1 404 70.3
BcaC06g33053 Brassica carinata HOM05D005603 ORTHO05D006944 5.7e-162 574.7 392 70.7
ATR0620G128 Amborella trichopoda HOM05D005603 ORTHO05D006944 2.2e-161 572.8 395 70.6
A03p48150 Brassica napus HOM05D005603 ORTHO05D006944 3.7e-161 572.0 381 71.7
BraA03t13922Z Brassica rapa HOM05D005603 ORTHO05D006944 3.7e-161 572.0 381 71.7
Haze_03808 Corylus avellana HOM05D005603 ORTHO05D006944 1.4e-160 570.1 422 68.5
Sed0017160 Sechium edule HOM05D005603 ORTHO05D006944 4.1e-160 568.5 394 69.8
Rhsim08G0035200 Rhododendron simsii HOM05D005603 ORTHO05D006944 9.1e-160 567.4 420 67.1
SalBow8G5567 Salvia bowleyana HOM05D005603 ORTHO05D006944 1.2e-159 567.0 407 68.6
BolC7t45134H Brassica oleracea HOM05D005603 ORTHO05D006944 7.7e-159 564.3 383 71.0
CARHR160730 Cardamine hirsuta HOM05D005603 ORTHO05D006944 5.0e-158 561.6 392 68.6
CAN.G358.2 Capsicum annuum HOM05D005603 ORTHO05D006944 6.5e-158 561.2 386 70.5
COL.COLO4_21962 Corchorus olitorius HOM05D005603 ORTHO05D006944 1.8e-155 553.1 291 87.6
FAN28G0526 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.3e-155 552.7 395 69.4
C07p46180 Brassica napus HOM05D005603 ORTHO05D006944 3.4e-154 548.9 404 67.1
FAN23G1635 Fragaria x ananassa HOM05D005603 ORTHO05D006944 5.7e-154 548.1 435 64.1
TWI53G1238 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 1.8e-152 543.1 302 83.8
Gohir.A02G169100 Gossypium hirsutum HOM05D005603 ORTHO05D006944 2.4e-152 542.7 291 85.6
Gohir.D03G010900 Gossypium hirsutum HOM05D005603 ORTHO05D006944 4.1e-152 542.0 291 85.2
Gorai.003G011300 Gossypium raimondii HOM05D005603 ORTHO05D006944 4.1e-152 542.0 291 85.2
Lj4C215G4 Lonicera japonica HOM05D005603 ORTHO05D006944 2.2e-150 536.2 358 73.5
BraA09t39879Z Brassica rapa HOM05D005603 ORTHO05D006944 6.5e-150 534.6 404 65.3
A09p44190 Brassica napus HOM05D005603 ORTHO05D006944 1.1e-149 533.9 382 67.5
Cpa.g.sc6.214 Carica papaya HOM05D005603 ORTHO05D006944 2.5e-149 532.7 412 66.3
BolC8t50258H Brassica oleracea HOM05D005603 ORTHO05D006944 7.2e-149 531.2 382 67.5
FAN19G0288 Fragaria x ananassa HOM05D005603 ORTHO05D006944 7.2e-149 531.2 391 67.8
Lalb_Chr16g0377611 Lupinus albus HOM05D005603 ORTHO05D006944 2.1e-148 529.6 291 83.8
BcaB01g00547 Brassica carinata HOM05D005603 ORTHO05D006944 6.1e-148 528.1 372 68.5
Duzib147G0771 Durio zibethinus HOM05D005603 ORTHO05D006944 1.4e-147 526.9 281 86.5
Sabra07G0013000 Salix brachista HOM05D005603 ORTHO05D006944 1.8e-147 526.6 394 68.0
unitig_32.g11821 Utricularia gibba HOM05D005603 ORTHO05D006944 5.2e-147 525.0 311 79.1
vmacro22086 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 6.8e-147 524.6 363 69.1
Zm00001eb227930 Zea mays HOM05D005603 ORTHO05D006944 1.2e-146 523.9 394 67.0
MSTRG.3829 Avicennia marina HOM05D005603 ORTHO05D006944 9.8e-146 520.8 396 64.6
Duzib264G0505 Durio zibethinus HOM05D005603 ORTHO05D006944 9.8e-146 520.8 358 71.5
FAN26G2705 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.2e-145 519.6 377 68.4
C08p26410 Brassica napus HOM05D005603 ORTHO05D006944 3.4e-138 495.7 353 68.3
vmacro18394 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 1.3e-137 493.8 341 69.5
Pp3c2_6370 Physcomitrium patens HOM05D005603 ORTHO05D006944 3.2e-136 489.2 389 61.7
AagrBONN_evm.TU.Sc2ySwM_228.543 Anthoceros agrestis HOM05D005603 ORTHO05D006944 5.9e-135 485.0 394 61.7
Pp3c10_8990 Physcomitrium patens HOM05D005603 ORTHO05D006944 9.5e-133 477.6 395 59.2
SMO117G0153 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 1.2e-132 477.2 387 61.0
Mapoly0152s0028 Marchantia polymorpha HOM05D005603 ORTHO05D006944 5.4e-120 435.3 396 56.1
Dinv40059 Davidia involucrata HOM05D005603 ORTHO05D006944 1.2e-116 424.1 300 69.7
SEGI_22640 Sequoiadendron giganteum HOM05D005603 ORTHO05D006944 1.8e-115 420.2 340 61.5
Dinv33602 Davidia involucrata HOM05D005603 ORTHO05D006944 6.8e-115 418.3 301 68.8
Mapoly0094s0075 Marchantia polymorpha HOM05D005603 ORTHO05D006944 1.3e-113 414.1 389 55.3
Actinidia31012 Actinidia chinensis HOM05D005603 ORTHO05D006944 9.2e-112 407.9 301 68.1
SMO037G0002 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 5.8e-106 388.7 266 69.2
Lalb_Chr09g0321921 Lupinus albus HOM05D005603 ORTHO05D006944 1.5e-82 310.8 235 65.5
Nn015s41468 Nelumbo nucifera HOM05D005603 ORTHO05D006944 4.5e-82 309.3 171 81.9
Actinidia26078 Actinidia chinensis HOM05D005603 ORTHO05D006944 7.1e-80 302.0 218 69.7
Lalb_Chr09g0321931 Lupinus albus HOM05D005603 ORTHO05D006944 5.1e-78 295.8 161 83.2
CBR_g36682 Chara braunii HOM05D005603 ORTHO05D000002 8.7e-78 295.0 224 62.9
Migut.H02480 Erythranthe guttata HOM05D005603 ORTHO05D006944 1.9e-77 293.9 307 52.1
Nn015s41469 Nelumbo nucifera HOM05D005603 ORTHO05D006944 3.1e-67 260.0 146 80.8
Solyc02g075630.3 Solanum lycopersicum HOM05D005603 ORTHO05D006944 1.1e-64 251.5 203 63.5
Atru.chr3.766 Acer truncatum HOM05D005603 ORTHO05D006944 1.1e-53 214.9 197 54.8
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 4.8e-52 209.5 318 40.3
Atru.chr2.40 Acer truncatum HOM05D005603 ORTHO05D006944 3.3e-45 186.8 188 52.1
Actinidia31013 Actinidia chinensis HOM05D005603 ORTHO05D006944 1.2e-31 141.7 72 87.5
CBR_g36680 Chara braunii HOM05D005603 ORTHO05D006944 6.8e-30 136.0 168 44.6
BcaC06g33054 Brassica carinata HOM05D005603 ORTHO05D006944 8.8e-30 135.6 142 51.4
RcHm_v2.0_Chr7g0231521 Rosa chinensis HOM05D005603 ORTHO05D006944 1.5e-21 108.2 177 41.8
Cfa027245 Carpinus fangiana HOM05D005603 ORTHO05D006944 3.4e-13 80.5 273 26.4
COL.COLO4_32114 Corchorus olitorius HOM05D000931 ORTHO05D002226 4.7e-07 60.1 34 76.5


User provided reference genes

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