Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g124290 Amaranthus hybridus HOM05D004174 ORTHO05D004624 1.5e-144 516.2 254 100.0
Ah.14g080300 Amaranthus hybridus HOM05D004174 ORTHO05D004624 3.2e-139 498.4 244 99.6
EL10Ac8g18616 Beta vulgaris HOM05D004174 ORTHO05D004624 3.9e-121 438.3 250 84.8
Hund09144 Selenicereus undatus HOM05D004174 ORTHO05D004624 6.2e-119 431.0 250 82.4
Sc18g0000710 Simmondsia chinensis HOM05D004174 ORTHO05D004624 2.7e-114 415.6 226 85.4
Lj1g0010752 Lotus japonicus HOM05D004174 ORTHO05D004624 1.3e-113 413.3 250 76.8
GSVIVG01015501001 Vitis vinifera HOM05D004174 ORTHO05D004624 1.3e-113 413.3 250 78.4
CiPaw.03G241700 Carya illinoinensis HOM05D004174 ORTHO05D004624 1.5e-112 409.8 254 77.6
Dinv36548 Davidia involucrata HOM05D004174 ORTHO05D004624 1.5e-112 409.8 250 78.0
Medtr2g054680 Medicago truncatula HOM05D004174 ORTHO05D004624 1.9e-112 409.5 250 77.2
Haze_25614 Corylus avellana HOM05D004174 ORTHO05D004624 5.7e-112 407.9 252 77.4
Psat1g025760 Pisum sativum HOM05D004174 ORTHO05D004624 5.7e-112 407.9 250 77.6
TWI34G0924 Tripterygium wilfordii HOM05D004174 ORTHO05D004624 7.4e-112 407.5 252 77.4
Gohir.D13G204700 Gossypium hirsutum HOM05D004174 ORTHO05D004624 9.6e-112 407.1 250 76.4
Gorai.013G233600 Gossypium raimondii HOM05D004174 ORTHO05D004624 9.6e-112 407.1 250 76.4
ClCG11G002850 Citrullus lanatus HOM05D004174 ORTHO05D004624 1.3e-111 406.8 250 76.4
Gohir.A13G199200 Gossypium hirsutum HOM05D004174 ORTHO05D004624 2.1e-111 406.0 250 76.4
Ca_03159_v3 Cicer arietinum L. HOM05D004174 ORTHO05D004624 3.7e-111 405.2 245 77.1
CsaV3_2G002690 Cucumis sativus L. HOM05D004174 ORTHO05D004624 3.7e-111 405.2 250 76.0
COL.COLO4_05761 Corchorus olitorius HOM05D004174 ORTHO05D004624 6.3e-111 404.4 250 76.0
Aqoxy7G02096 Aquilegia oxysepala HOM05D004174 ORTHO05D004624 8.2e-111 404.1 251 76.9
FAN19G0954 Fragaria x ananassa HOM05D004174 ORTHO05D004624 8.2e-111 404.1 250 76.4
TAR383G0558 Trochodendron aralioides HOM05D004174 ORTHO05D004624 8.2e-111 404.1 244 78.3
MELO3C004525.2 Cucumis melo HOM05D004174 ORTHO05D004624 1.1e-110 403.7 250 76.0
FvH4_1g03600 Fragaria vesca HOM05D004174 ORTHO05D004624 1.1e-110 403.7 250 76.4
Glyma.06G216700 Glycine max HOM05D004174 ORTHO05D004624 1.1e-110 403.7 250 76.0
Prupe.7G239600 Prunus persica HOM05D004174 ORTHO05D004624 1.4e-110 403.3 250 76.0
Aa31LG8G2170 Aethionema arabicum HOM05D004174 ORTHO05D004624 1.8e-110 402.9 243 79.4
CANSAT11G0280 Cannabis sativa HOM05D004174 ORTHO05D004624 2.4e-110 402.5 250 75.6
CARHR192760 Cardamine hirsuta HOM05D004174 ORTHO05D004624 2.4e-110 402.5 250 77.2
DCAR_017828 Daucus carota HOM05D004174 ORTHO05D004624 3.1e-110 402.1 252 76.2
Manes.14G130500 Manihot esculenta HOM05D004174 ORTHO05D004624 3.1e-110 402.1 252 76.6
THA.LOC104811038 Tarenaya hassleriana HOM05D004174 ORTHO05D004624 4.1e-110 401.7 250 76.0
MD02G1035600 Malus domestica HOM05D004174 ORTHO05D004624 5.3e-110 401.4 250 75.6
RcHm_v2.0_Chr2g0089131 Rosa chinensis HOM05D004174 ORTHO05D004624 5.3e-110 401.4 245 76.7
Thecc.09G123000 Theobroma cacao HOM05D004174 ORTHO05D004624 5.3e-110 401.4 250 76.4
AL6G31620 Arabidopsis lyrata HOM05D004174 ORTHO05D004624 6.9e-110 401.0 226 83.2
MSTRG.19607 Avicennia marina HOM05D004174 ORTHO05D004624 6.9e-110 401.0 250 76.8
Thhalv10013566m.g Eutrema salsugineum HOM05D004174 ORTHO05D004624 6.9e-110 401.0 250 76.8
AT5G20070 Arabidopsis thaliana HOM05D004174 ORTHO05D004624 9.0e-110 400.6 226 82.3
Cfa003346 Carpinus fangiana HOM05D004174 ORTHO05D004624 9.0e-110 400.6 252 76.2
FAN26G0665 Fragaria x ananassa HOM05D004174 ORTHO05D004624 9.0e-110 400.6 250 75.6
FAN26G3217 Fragaria x ananassa HOM05D004174 ORTHO05D004624 9.0e-110 400.6 250 75.6
Nn8g39387 Nelumbo nucifera HOM05D004174 ORTHO05D004624 9.0e-110 400.6 250 76.0
Rhsim03G0246500 Rhododendron simsii HOM05D004174 ORTHO05D004624 1.2e-109 400.2 251 76.1
Actinidia26403 Actinidia chinensis HOM05D004174 ORTHO05D004624 1.5e-109 399.8 250 75.2
TPR.G31095 Trifolium pratense HOM05D004174 ORTHO05D004624 1.5e-109 399.8 250 76.4
BcaC03g13730 Brassica carinata HOM05D004174 ORTHO05D004624 2.0e-109 399.4 250 76.4
Hma1.2p1_0665F.1_g199150 Hydrangea macrophylla HOM05D004174 ORTHO05D004624 2.0e-109 399.4 251 76.1
Phvul.009G197200 Phaseolus vulgaris HOM05D004174 ORTHO05D004624 2.0e-109 399.4 250 75.2
vmacro06177 Vaccinium macrocarpon HOM05D004174 ORTHO05D004624 2.0e-109 399.4 250 75.2
VMungo1309G2067 Vigna mungo HOM05D004174 ORTHO05D004624 2.0e-109 399.4 250 74.4
Ciclev10008313m.g Citrus clementina HOM05D004174 ORTHO05D004624 2.6e-109 399.1 251 75.7
Sp6g24340 Schrenkiella parvula HOM05D004174 ORTHO05D004624 2.6e-109 399.1 229 80.8
THA.LOC104799651 Tarenaya hassleriana HOM05D004174 ORTHO05D004624 2.6e-109 399.1 229 79.9
Eucgr.C04181 Eucalyptus grandis HOM05D004174 ORTHO05D004624 4.5e-109 398.3 250 75.2
Actinidia07434 Actinidia chinensis HOM05D004174 ORTHO05D004624 5.9e-109 397.9 250 75.6
FAN23G0992 Fragaria x ananassa HOM05D004174 ORTHO05D004624 7.6e-109 397.5 250 75.2
FAN28G1355 Fragaria x ananassa HOM05D004174 ORTHO05D004624 7.6e-109 397.5 250 74.8
Carub.0006s1845 Capsella rubella HOM05D004174 ORTHO05D004624 1.7e-108 396.4 228 80.7
MD00G1107300 Malus domestica HOM05D004174 ORTHO05D004624 2.2e-108 396.0 250 74.8
Manes.06G050000 Manihot esculenta HOM05D004174 ORTHO05D004624 2.2e-108 396.0 252 74.6
TWI32G1270 Tripterygium wilfordii HOM05D004174 ORTHO05D004624 2.2e-108 396.0 252 75.8
BcaB01g04811 Brassica carinata HOM05D004174 ORTHO05D004624 2.9e-108 395.6 247 75.7
Sed0019119 Sechium edule HOM05D004174 ORTHO05D004624 2.9e-108 395.6 250 74.0
SGA_v2.0_scaffold229G43324 Striga asiatica HOM05D004174 ORTHO05D004624 3.8e-108 395.2 241 76.3
A02p06020 Brassica napus HOM05D004174 ORTHO05D004624 5.0e-108 394.8 250 75.6
BraA02t05553Z Brassica rapa HOM05D004174 ORTHO05D004624 5.0e-108 394.8 250 75.6
Atru.chr7.1197 Acer truncatum HOM05D004174 ORTHO05D004624 6.5e-108 394.4 252 75.0
PSO170G6838 Papaver somniferum HOM05D004174 ORTHO05D004624 8.4e-108 394.0 235 77.9
PSO455G0049 Papaver somniferum HOM05D004174 ORTHO05D004624 8.4e-108 394.0 235 77.4
Potri.018G070400 Populus trichocarpa HOM05D004174 ORTHO05D004624 1.1e-107 393.7 250 75.2
Duzib150G0384 Durio zibethinus HOM05D004174 ORTHO05D004624 1.4e-107 393.3 250 75.6
QL02p087765 Quercus lobata HOM05D004174 ORTHO05D004624 1.4e-107 393.3 228 78.5
Peaxi162Scf02490g00007 Petunia axillaris HOM05D004174 ORTHO05D004624 1.9e-107 392.9 250 74.8
Potri.006G154200 Populus trichocarpa HOM05D004174 ORTHO05D004624 1.9e-107 392.9 252 73.8
BcaB05g22875 Brassica carinata HOM05D004174 ORTHO05D004624 2.5e-107 392.5 250 74.8
BolC3t13612H Brassica oleracea HOM05D004174 ORTHO05D004624 5.5e-107 391.3 226 79.6
Cc06_g08790 Coffea canephora HOM05D004174 ORTHO05D004624 7.2e-107 391.0 225 80.0
PGSC0003DMG400024321 Solanum tuberosum HOM05D004174 ORTHO05D004624 6.1e-106 387.9 237 75.5
Zm00001eb377430 Zea mays HOM05D004174 ORTHO05D004624 6.1e-106 387.9 231 77.1
Lalb_Chr23g0275331 Lupinus albus HOM05D004174 ORTHO05D004624 1.0e-105 387.1 250 72.0
Nitab4.5_0006698g0010 Nicotiana tabacum HOM05D004174 ORTHO05D004624 1.0e-105 387.1 250 72.8
Migut.J01169 Erythranthe guttata HOM05D004174 ORTHO05D004624 1.3e-105 386.7 231 77.9
Sopen06g031500 Solanum pennellii HOM05D004174 ORTHO05D004624 1.8e-105 386.3 237 75.5
HPP92_000685 Vanilla planifolia HOM05D004174 ORTHO05D004624 3.9e-105 385.2 250 72.8
C03p11380 Brassica napus HOM05D004174 ORTHO05D004624 5.1e-105 384.8 226 78.8
MBI04_g24208_MAGBIO Magnolia biondii HOM05D004174 ORTHO05D004624 5.1e-105 384.8 241 75.1
Oeu058056.1 Olea europaea HOM05D004174 ORTHO05D004624 5.1e-105 384.8 250 71.6
PGR102G0881 Punica granatum HOM05D004174 ORTHO05D004624 5.1e-105 384.8 250 72.0
HanXRQChr12g0368841 Helianthus annuus HOM05D004174 ORTHO05D004624 6.7e-105 384.4 228 77.2
Os06g0141166 Oryza sativa ssp. japonica HOM05D004174 ORTHO05D004624 6.7e-105 384.4 235 75.7
A03p09800 Brassica napus HOM05D004174 ORTHO05D004624 8.7e-105 384.0 224 79.5
BraA03t10295Z Brassica rapa HOM05D004174 ORTHO05D004624 8.7e-105 384.0 224 79.5
Solyc06g075080.4 Solanum lycopersicum HOM05D004174 ORTHO05D004624 8.7e-105 384.0 226 77.9
HanXRQChr06g0180241 Helianthus annuus HOM05D004174 ORTHO05D004624 1.1e-104 383.6 241 74.3
HPP92_000661 Vanilla planifolia HOM05D004174 ORTHO05D004624 1.1e-104 383.6 250 72.4
BNapus_Darmor_BZH_scaffold_38p01820 Brassica napus HOM05D004174 ORTHO05D004624 7.4e-104 380.9 250 74.0
Nitab4.5_0000106g0230 Nicotiana tabacum HOM05D004174 ORTHO05D004624 1.3e-103 380.2 226 77.0
Duzib187G0531 Durio zibethinus HOM05D004174 ORTHO05D004624 2.8e-103 379.0 256 71.9
SalBow3G2402 Salvia bowleyana HOM05D004174 ORTHO05D004624 2.8e-103 379.0 250 73.2
CAN.G1966.1 Capsicum annuum HOM05D004174 ORTHO05D004624 1.1e-102 377.1 250 71.2
COL.COLO4_17917 Corchorus olitorius HOM05D004174 ORTHO05D004624 1.1e-102 377.1 238 74.8
Sabra18G0061500 Salix brachista HOM05D004174 ORTHO05D004624 1.1e-102 377.1 235 74.0
ECA240G3275 Erigeron canadensis HOM05D004174 ORTHO05D004624 1.8e-102 376.3 228 75.0
Lsat_1_v5_gn_8_58900 Lactuca sativa HOM05D004174 ORTHO05D004624 4.5e-101 371.7 246 70.7
HanXRQChr03g0062501 Helianthus annuus HOM05D004174 ORTHO05D004624 5.0e-100 368.2 228 73.7
DCAR_009201 Daucus carota HOM05D004174 ORTHO05D004624 1.1e-99 367.1 228 75.0
ATR1156G006 Amborella trichopoda HOM05D004174 ORTHO05D004624 2.5e-99 365.9 251 68.5
CDE02G3646 Ceratophyllum demersum HOM05D004174 ORTHO05D004624 4.2e-99 365.2 222 76.1
Lalb_Chr08g0234871 Lupinus albus HOM05D004174 ORTHO05D004624 5.5e-99 364.8 244 71.3
Lalb_Chr07g0178801 Lupinus albus HOM05D004174 ORTHO05D004624 9.4e-99 364.0 225 73.8
MD15G1175700 Malus domestica HOM05D004174 ORTHO05D004624 1.6e-98 363.2 301 61.5
arahy.Tifrunner.gnm1.ann1.SBVG8E Arachis hypogaea HOM05D004174 ORTHO05D004624 3.6e-98 362.1 247 68.4
Lsat_1_v5_gn_7_42401 Lactuca sativa HOM05D004174 ORTHO05D004624 1.0e-97 360.5 225 72.4
Gorai.004G277900 Gossypium raimondii HOM05D004174 ORTHO05D004624 1.4e-97 360.1 257 67.3
Psat4g040360 Pisum sativum HOM05D004174 ORTHO05D004624 3.0e-97 359.0 227 70.9
Gohir.D08G260000 Gossypium hirsutum HOM05D004174 ORTHO05D004624 3.9e-97 358.6 250 67.6
VMungo1215G2625 Vigna mungo HOM05D004174 ORTHO05D004624 5.7e-96 354.8 228 71.9
Medtr4g113990 Medicago truncatula HOM05D004174 ORTHO05D004624 7.4e-96 354.4 227 70.0
TPR.G10694 Trifolium pratense HOM05D004174 ORTHO05D004624 7.4e-96 354.4 227 69.2
arahy.Tifrunner.gnm1.ann1.E6UBTJ Arachis hypogaea HOM05D004174 ORTHO05D004624 1.7e-95 353.2 259 65.3
MELO3C026643.2 Cucumis melo HOM05D004174 ORTHO05D004624 2.2e-95 352.8 228 73.7
Phvul.003G162700 Phaseolus vulgaris HOM05D004174 ORTHO05D004624 2.2e-95 352.8 228 71.5
CSS0035220 Camellia sinensis var. sinensis HOM05D004174 ORTHO05D004624 6.3e-95 351.3 204 80.4
AUR62033476 Chenopodium quinoa HOM05D004174 ORTHO05D004624 1.2e-93 347.1 250 70.0
Sed0008859 Sechium edule HOM05D004174 ORTHO05D004624 2.6e-93 345.9 225 71.1
SEGI_17043 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 3.4e-93 345.5 230 70.4
Glyma.17G116600 Glycine max HOM05D004174 ORTHO05D004624 1.3e-92 343.6 229 69.0
SEGI_09002 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 1.1e-80 303.9 230 60.9
AUR62011109 Chenopodium quinoa HOM05D004174 ORTHO05D004624 2.2e-79 299.7 197 77.2
ClCG06G010920 Citrullus lanatus HOM05D004174 ORTHO05D004624 9.1e-78 294.3 228 61.4
AUR62030487 Chenopodium quinoa HOM05D004174 ORTHO05D004624 1.2e-77 293.9 177 81.4
AagrBONN_evm.TU.Sc2ySwM_368.699 Anthoceros agrestis HOM05D004174 ORTHO05D004624 1.0e-76 290.8 227 59.9
Mapoly0103s0044 Marchantia polymorpha HOM05D004174 ORTHO05D004624 1.9e-75 286.6 225 59.6
SMO169G0291 Selaginella moellendorffii HOM05D004174 ORTHO05D004624 1.9e-75 286.6 225 61.8
Pp3c3_2090 Physcomitrium patens HOM05D004174 ORTHO05D004624 2.5e-75 286.2 231 58.4
Dinv41532 Davidia involucrata HOM05D004174 ORTHO05D004624 3.2e-75 285.8 152 86.2
Glyma.05G008302 Glycine max HOM05D004174 ORTHO05D004624 2.9e-60 236.1 155 70.3
Lj7A632G45 Lonicera japonica HOM05D004174 ORTHO05D004624 5.7e-56 221.9 121 81.8
Gohir.A08G239300 Gossypium hirsutum HOM05D004174 ORTHO05D004624 2.7e-53 213.0 121 78.5
Lj4A460T58 Lonicera japonica HOM05D004174 ORTHO05D004624 1.0e-52 211.1 121 79.3
Lj4g0002160 Lotus japonicus HOM05D004174 ORTHO05D004624 9.5e-51 204.5 121 73.6
AUR62015314 Chenopodium quinoa HOM05D004174 ORTHO05D004624 1.4e-46 190.7 147 64.6
SEGI_03330 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 7.8e-45 184.9 121 64.5
Cre09.g396900 Chlamydomonas reinhardtii HOM05D004174 ORTHO05D004624 3.4e-40 169.5 233 39.9
MD02G1035400 Malus domestica HOM05D004174 ORTHO05D004624 2.3e-36 156.8 83 83.1
Cc11_g15180 Coffea canephora HOM05D004174 ORTHO05D004624 2.5e-35 153.3 122 66.4
Haze_27339 Corylus avellana HOM05D004174 ORTHO05D004624 2.8e-34 149.8 159 50.9
SEGI_13131 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 7.1e-30 135.2 261 33.0
Cfa023976 Carpinus fangiana HOM05D003934 ORTHO05D005108 1.0e-28 131.3 254 33.5
Ah.12g053390 Amaranthus hybridus HOM05D004174 ORTHO05D004624 5.1e-28 129.0 63 93.7
Ah.12g055680 Amaranthus hybridus HOM05D004174 ORTHO05D004624 1.5e-27 127.5 63 92.1
Ah.05g171270 Amaranthus hybridus HOM05D004174 ORTHO05D004624 2.5e-27 126.7 63 92.1
Pp3c14_12120 Physcomitrium patens HOM05D004174 ORTHO05D004624 9.6e-27 124.8 227 36.6
Mapoly0019s0154 Marchantia polymorpha HOM05D004174 ORTHO05D004624 2.6e-24 116.7 235 37.0
Lj4C460T3 Lonicera japonica HOM05D004174 ORTHO05D004624 3.8e-23 112.8 79 65.8
MCO10G159 Micromonas commoda HOM05D004174 ORTHO05D004624 8.4e-23 111.7 259 30.5
CBR_g46446 Chara braunii HOM05D004174 ORTHO05D004624 3.9e-20 102.8 210 34.3
PRCOL_00006603 Prasinoderma coloniale HOM05D004174 ORTHO05D004624 3.9e-20 102.8 139 38.8
Sabra06G0122300 Salix brachista HOM05D004174 ORTHO05D004624 9.0e-17 91.7 48 91.7
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 1.7e-15 87.4 146 39.0
Cre13.g582476 Chlamydomonas reinhardtii HOM05D004174 ORTHO05D004624 3.5e-13 79.7 94 46.8
Ah.12g053410 Amaranthus hybridus HOM05D004174 ORTHO05D004624 3.3e-11 73.2 38 86.8
SMO141G0190 Selaginella moellendorffii HOM05D004174 ORTHO05D004624 2.8e-10 70.1 120 39.2
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 6.2e-10 68.9 67 49.3
BolC2t07007H Brassica oleracea HOM05D004174 ORTHO05D004624 4.2e-06 56.2 44 52.3


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