Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g124160 Amaranthus hybridus HOM05D015383 ORTHO05D009966 2.7e-61 238.4 115 100.0
Potri.005G136800 Populus trichocarpa HOM05D008581 ORTHO05D009966 4.8e-10 68.2 115 37.4
QL06p042046 Quercus lobata HOM05D008581 ORTHO05D009966 2.4e-09 65.9 117 41.9
CiPaw.01G020500 Carya illinoinensis HOM05D015383 ORTHO05D009966 5.3e-09 64.7 116 37.1
CiPaw.01G020900 Carya illinoinensis HOM05D015383 ORTHO05D009966 1.2e-08 63.5 116 37.1
Dinv39871 Davidia involucrata HOM05D008581 ORTHO05D009966 1.5e-08 63.2 124 36.3
QL06p042091 Quercus lobata HOM05D008581 ORTHO05D009966 1.5e-08 63.2 115 40.9
QL06p042132 Quercus lobata HOM05D008581 ORTHO05D009966 2.0e-08 62.8 119 40.3
CiPaw.01G021000 Carya illinoinensis HOM05D015383 ORTHO05D009966 2.6e-08 62.4 116 36.2
Lj7C64T2 Lonicera japonica HOM05D008581 ORTHO05D009966 3.4e-08 62.0 117 37.6
Atru.chr3.365 Acer truncatum HOM05D008581 ORTHO05D009966 7.7e-08 60.8 122 35.2
TPR.G745 Trifolium pratense HOM05D008581 ORTHO05D009966 7.7e-08 60.8 107 42.1
Atru.chr3.367 Acer truncatum HOM05D008581 ORTHO05D009966 2.9e-07 58.9 122 35.2
Cfa004000 Carpinus fangiana HOM05D008581 ORTHO05D009966 3.8e-07 58.5 113 38.9
CiPaw.01G020300 Carya illinoinensis HOM05D015383 ORTHO05D009966 1.9e-06 56.2 112 34.8
Lj7C67T3 Lonicera japonica HOM05D008581 ORTHO05D009966 1.9e-06 56.2 113 34.5
CiPaw.01G020100 Carya illinoinensis HOM05D015383 ORTHO05D009966 2.5e-06 55.8 116 33.6
Sabra07G0037300 Salix brachista HOM05D008581 ORTHO05D009966 2.5e-06 55.8 110 37.3
Lj7C67G2 Lonicera japonica HOM05D008581 ORTHO05D009966 3.2e-06 55.5 113 36.3
Psat4g087360 Pisum sativum HOM05D008581 ORTHO05D011864 3.2e-06 55.5 106 37.7
Hma1.2p1_0200F.1_g086080 Hydrangea macrophylla HOM05D008581 ORTHO05D009966 5.5e-06 54.7 123 31.7
Ca_21178_v3 Cicer arietinum L. HOM05D008581 ORTHO05D009966 9.4e-06 53.9 113 35.4
Ca_22185_v3 Cicer arietinum L. HOM05D008581 ORTHO05D009966 9.4e-06 53.9 113 35.4


User provided reference genes

Program Settings