Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g123840 Amaranthus hybridus HOM05D006096 ORTHO05D007775 2.0e-71 272.3 136 100.0
AUR62003818 Chenopodium quinoa HOM05D006096 ORTHO05D007775 4.3e-26 121.7 67 85.1
EL10Ac6g15136 Beta vulgaris HOM05D006096 ORTHO05D007775 3.7e-25 118.6 69 82.6
AUR62001986 Chenopodium quinoa HOM05D006096 ORTHO05D007775 4.8e-25 118.2 67 80.6
Sc16g0000180 Simmondsia chinensis HOM05D006096 ORTHO05D007775 2.5e-21 105.9 67 76.1
QL06p048511 Quercus lobata HOM05D006096 ORTHO05D007775 3.2e-21 105.5 67 74.6
Hund13600 Selenicereus undatus HOM05D006096 ORTHO05D007775 5.5e-21 104.8 69 69.6
TAR625G1553 Trochodendron aralioides HOM05D006096 ORTHO05D007775 5.5e-21 104.8 67 70.1
Nn1g05418 Nelumbo nucifera HOM05D006096 ORTHO05D007775 1.2e-20 103.6 67 70.1
GSVIVG01006632001 Vitis vinifera HOM05D006096 ORTHO05D007775 1.6e-20 103.2 67 67.2
Nitab4.5_0000743g0130 Nicotiana tabacum HOM05D006096 ORTHO05D007775 7.9e-20 100.9 161 39.1
Haze_24873 Corylus avellana HOM05D006096 ORTHO05D007775 1.0e-19 100.5 67 70.1
Haze_24882 Corylus avellana HOM05D006096 ORTHO05D007775 1.0e-19 100.5 67 70.1
Actinidia28854 Actinidia chinensis HOM05D006096 ORTHO05D007775 1.4e-19 100.1 67 70.1
Rhsim08G0012600 Rhododendron simsii HOM05D006096 ORTHO05D007775 3.0e-19 99.0 67 67.2
Nitab4.5_0004570g0020 Nicotiana tabacum HOM05D006096 ORTHO05D007775 3.9e-19 98.6 86 57.0
Sopen11g004830 Solanum pennellii HOM05D006096 ORTHO05D007775 3.9e-19 98.6 67 70.1
COL.COLO4_27275 Corchorus olitorius HOM05D006096 ORTHO05D007775 5.1e-19 98.2 63 71.4
MBI02_g02177_MAGBIO Magnolia biondii HOM05D006096 ORTHO05D007775 5.1e-19 98.2 67 65.7
Potri.005G073600 Populus trichocarpa HOM05D006096 ORTHO05D007775 6.7e-19 97.8 63 73.0
Atru.chr3.1373 Acer truncatum HOM05D006096 ORTHO05D007775 8.8e-19 97.4 67 67.2
Sabra05G0060100 Salix brachista HOM05D006096 ORTHO05D007775 8.8e-19 97.4 63 71.4
CSS0046442 Camellia sinensis var. sinensis HOM05D006096 ORTHO05D007775 2.5e-18 95.9 67 62.7
Gohir.D10G103800 Gossypium hirsutum HOM05D006096 ORTHO05D007775 2.5e-18 95.9 63 66.7
FAN23G0863 Fragaria x ananassa HOM05D006096 ORTHO05D007775 4.3e-18 95.1 67 64.2
FAN28G1526 Fragaria x ananassa HOM05D006096 ORTHO05D007775 4.3e-18 95.1 67 64.2
Cpa.g.sc55.89 Carica papaya HOM05D006096 ORTHO05D007775 5.7e-18 94.7 64 65.6
Sed0027583 Sechium edule HOM05D006096 ORTHO05D007775 5.7e-18 94.7 64 64.1
PGSC0003DMG400016160 Solanum tuberosum HOM05D006096 ORTHO05D007775 5.7e-18 94.7 67 67.2
Gorai.011G113400 Gossypium raimondii HOM05D006096 ORTHO05D007775 7.4e-18 94.4 63 66.7
Gohir.A10G085100 Gossypium hirsutum HOM05D006096 ORTHO05D007775 9.7e-18 94.0 63 66.7
CAN.G905.37 Capsicum annuum HOM05D006096 ORTHO05D007775 1.3e-17 93.6 67 67.2
Peaxi162Scf00381g01013 Petunia axillaris HOM05D006096 ORTHO05D007775 2.2e-17 92.8 67 62.7
vmacro18587 Vaccinium macrocarpon HOM05D006096 ORTHO05D007775 2.2e-17 92.8 72 62.5
MELO3C017606.2 Cucumis melo HOM05D006096 ORTHO05D007775 2.8e-17 92.4 67 59.7
Duzib187G1253 Durio zibethinus HOM05D006096 ORTHO05D007775 2.8e-17 92.4 63 65.1
AT5G10320 Arabidopsis thaliana HOM05D006096 ORTHO05D007775 3.7e-17 92.0 90 54.4
Eucgr.H04751 Eucalyptus grandis HOM05D006096 ORTHO05D007775 4.8e-17 91.7 66 65.2
RcHm_v2.0_Chr2g0112761 Rosa chinensis HOM05D006096 ORTHO05D007775 4.8e-17 91.7 67 61.2
AL6G20820 Arabidopsis lyrata HOM05D006096 ORTHO05D007775 6.3e-17 91.3 93 51.6
FAN19G2919 Fragaria x ananassa HOM05D006096 ORTHO05D007775 6.3e-17 91.3 61 67.2
Lalb_Chr19g0127391 Lupinus albus HOM05D006096 ORTHO05D007775 6.3e-17 91.3 65 61.5
ClCG07G017370 Citrullus lanatus HOM05D006096 ORTHO05D007775 8.2e-17 90.9 67 58.2
CsaV3_4G004600 Cucumis sativus L. HOM05D006096 ORTHO05D007775 8.2e-17 90.9 67 58.2
CsaV3_UNG122970 Cucumis sativus L. HOM05D006096 ORTHO05D007775 8.2e-17 90.9 67 58.2
CsaV3_UNG160190 Cucumis sativus L. HOM05D006096 ORTHO05D007775 8.2e-17 90.9 67 58.2
CsaV3_UNG223570 Cucumis sativus L. HOM05D006096 ORTHO05D007775 8.2e-17 90.9 67 58.2
TWI53G1189 Tripterygium wilfordii HOM05D006096 ORTHO05D007775 1.1e-16 90.5 67 64.2
ATR0684G225 Amborella trichopoda HOM05D006096 ORTHO05D007775 1.4e-16 90.1 82 54.9
Aqoxy6G00746 Aquilegia oxysepala HOM05D006096 ORTHO05D007775 1.4e-16 90.1 62 66.1
arahy.Tifrunner.gnm1.ann1.DD3ZZY Arachis hypogaea HOM05D006096 ORTHO05D007775 2.4e-16 89.4 65 61.5
FvH4_1g20510 Fragaria vesca HOM05D006096 ORTHO05D007775 2.4e-16 89.4 64 64.1
Os04g0451100 Oryza sativa ssp. japonica HOM05D006096 ORTHO05D007775 2.4e-16 89.4 70 60.0
CANSAT01G2346 Cannabis sativa HOM05D006096 ORTHO05D007775 4.1e-16 88.6 66 65.2
arahy.Tifrunner.gnm1.ann1.C4UPUA Arachis hypogaea HOM05D006096 ORTHO05D007775 6.9e-16 87.8 65 60.0
Prupe.6G191000 Prunus persica HOM05D006096 ORTHO05D007775 9.1e-16 87.4 67 59.7
Aa31LG3G16830 Aethionema arabicum HOM05D006096 ORTHO05D007775 1.2e-15 87.0 59 71.2
Cc07_g14840 Coffea canephora HOM05D006096 ORTHO05D007775 1.2e-15 87.0 64 64.1
Lsat_1_v5_gn_5_34320 Lactuca sativa HOM05D006096 ORTHO05D007775 1.5e-15 86.7 103 47.6
Medtr3g087010 Medicago truncatula HOM05D006096 ORTHO05D007775 1.5e-15 86.7 65 60.0
Psat5g090600 Pisum sativum HOM05D006096 ORTHO05D007775 1.5e-15 86.7 65 60.0
ECA246G2908 Erigeron canadensis HOM05D006096 ORTHO05D007775 2.0e-15 86.3 67 61.2
MD01G1033500 Malus domestica HOM05D006096 ORTHO05D007775 2.0e-15 86.3 66 60.6
CDE06G0254 Ceratophyllum demersum HOM05D006096 ORTHO05D007775 2.6e-15 85.9 62 62.9
Glyma.11G241200 Glycine max HOM05D006096 ORTHO05D007775 3.4e-15 85.5 65 58.5
BcaB08g37116 Brassica carinata HOM05D006096 ORTHO05D007775 4.5e-15 85.1 64 59.4
BcaC04g19315 Brassica carinata HOM05D006096 ORTHO05D007775 4.5e-15 85.1 64 59.4
Lj6g0005810 Lotus japonicus HOM05D006096 ORTHO05D007775 4.5e-15 85.1 65 60.0
BcaC04g19312 Brassica carinata HOM05D006096 ORTHO05D007775 5.9e-15 84.7 64 59.4
C09p67070 Brassica napus HOM05D006096 ORTHO05D007775 5.9e-15 84.7 64 59.4
BolC9t59480H Brassica oleracea HOM05D006096 ORTHO05D007775 5.9e-15 84.7 64 59.4
TPR.G15994 Trifolium pratense HOM05D006096 ORTHO05D007775 5.9e-15 84.7 65 60.0
Glyma.18G015800 Glycine max HOM05D006096 ORTHO05D007775 7.7e-15 84.3 65 58.5
BraA10t44776Z Brassica rapa HOM05D006096 ORTHO05D007775 1.0e-14 84.0 64 59.4
A10p27260 Brassica napus HOM05D006096 ORTHO05D007775 1.7e-14 83.2 64 59.4
Phvul.001G253200 Phaseolus vulgaris HOM05D006096 ORTHO05D007775 1.7e-14 83.2 65 61.5
SGA_v2.0_scaffold111G31503 Striga asiatica HOM05D006096 ORTHO05D007775 5.0e-14 81.6 61 62.3
Thhalv10013818m.g Eutrema salsugineum HOM05D006096 ORTHO05D007775 1.1e-13 80.5 69 55.1
PSO447G0355 Papaver somniferum HOM05D006096 ORTHO05D007775 2.5e-13 79.3 79 54.4
VMungo1383G2853 Vigna mungo HOM05D006096 ORTHO05D007775 2.5e-13 79.3 65 56.9
Zm00001eb081250 Zea mays HOM05D006096 ORTHO05D007775 2.5e-13 79.3 61 57.4
Oeu033049.1 Olea europaea HOM05D006096 ORTHO05D007775 4.2e-13 78.6 67 55.2
QL06p048476 Quercus lobata HOM05D006096 ORTHO05D007775 4.2e-13 78.6 64 59.4
SalBow3G4176 Salvia bowleyana HOM05D006096 ORTHO05D007775 4.2e-13 78.6 61 62.3
PSO210G0897 Papaver somniferum HOM05D006096 ORTHO05D007775 9.4e-13 77.4 79 53.2
SEGI_02986 Sequoiadendron giganteum HOM05D006096 ORTHO05D007775 3.6e-12 75.5 61 57.4
Migut.H02345 Erythranthe guttata HOM05D006096 ORTHO05D007775 6.1e-12 74.7 70 55.7
CARHR202960 Cardamine hirsuta HOM05D006096 ORTHO05D007775 7.9e-12 74.3 89 44.9
unitig_899.g14550 Utricularia gibba HOM05D006096 ORTHO05D007775 3.0e-11 72.4 63 54.0
CARHR202970 Cardamine hirsuta HOM05D006096 ORTHO05D007775 6.7e-11 71.2 67 47.8
SMO301G0024 Selaginella moellendorffii HOM05D006096 ORTHO05D007775 8.8e-11 70.9 64 53.1
HanXRQChr15g0477621 Helianthus annuus HOM05D006096 ORTHO05D007775 7.4e-10 67.8 67 50.7
HPP92_011214 Vanilla planifolia HOM05D006096 ORTHO05D007775 1.3e-09 67.0 60 51.7
Pp3c26_3770 Physcomitrium patens HOM05D006096 ORTHO05D007775 3.7e-09 65.5 66 43.9
Dinv08841 Davidia involucrata HOM05D006096 ORTHO05D007775 1.3e-06 57.0 71 53.5
Mapoly0077s0016 Marchantia polymorpha HOM05D006096 ORTHO05D007775 2.9e-06 55.8 66 42.4


User provided reference genes

Program Settings