Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g123730 Amaranthus hybridus HOM05D000786 ORTHO05D006216 2.0e-32 141.7 67 100.0
EL10Ac6g15224 Beta vulgaris HOM05D005778 ORTHO05D007245 1.9e-19 98.6 65 70.8
Hund03512 Selenicereus undatus HOM05D005778 ORTHO05D007245 2.0e-16 88.6 65 67.7
QL06p031416 Quercus lobata HOM05D000786 ORTHO05D006216 1.8e-12 75.5 68 61.8
TAR381G0907 Trochodendron aralioides HOM05D000786 ORTHO05D006216 5.6e-11 70.5 66 53.0
Cfa002784 Carpinus fangiana HOM05D000786 ORTHO05D006216 3.7e-10 67.8 66 53.0
Dinv25892 Davidia involucrata HOM05D000786 ORTHO05D006216 8.2e-10 66.6 65 49.2
PGR119G2557 Punica granatum HOM05D000786 ORTHO05D006216 8.2e-10 66.6 66 54.5
Prupe.6G166900 Prunus persica HOM05D000786 ORTHO05D006216 1.1e-09 66.2 70 52.9
COL.COLO4_03364 Corchorus olitorius HOM05D000786 ORTHO05D006216 1.4e-09 65.9 65 49.2
Cfa018290 Carpinus fangiana HOM05D000786 ORTHO05D006216 1.8e-09 65.5 65 47.7
Ciclev10026866m.g Citrus clementina HOM05D000786 ORTHO05D006216 1.8e-09 65.5 66 53.0
Haze_17797 Corylus avellana HOM05D000786 ORTHO05D006216 1.8e-09 65.5 65 47.7
Sabra05G0149300 Salix brachista HOM05D000786 ORTHO05D006216 1.8e-09 65.5 65 46.2
CiPaw.04G089000 Carya illinoinensis HOM05D000786 ORTHO05D006216 2.4e-09 65.1 67 49.3
Haze_25081 Corylus avellana HOM05D000786 ORTHO05D006216 2.4e-09 65.1 66 51.5
MBI16_g14985_MAGBIO Magnolia biondii HOM05D000786 ORTHO05D006216 2.4e-09 65.1 66 50.0
Potri.002G065200 Populus trichocarpa HOM05D000786 ORTHO05D006216 2.4e-09 65.1 65 44.6
GSVIVG01034575001 Vitis vinifera HOM05D000786 ORTHO05D006216 2.4e-09 65.1 65 47.7
Manes.18G094200 Manihot esculenta HOM05D000786 ORTHO05D006216 4.0e-09 64.3 65 47.7
RcHm_v2.0_Chr6g0274371 Rosa chinensis HOM05D000786 ORTHO05D006216 4.0e-09 64.3 65 47.7
Atru.chr4.724 Acer truncatum HOM05D000786 ORTHO05D006216 5.3e-09 63.9 66 50.0
Potri.005G195800 Populus trichocarpa HOM05D000786 ORTHO05D006216 5.3e-09 63.9 65 46.2
RcHm_v2.0_Chr2g0117891 Rosa chinensis HOM05D000786 ORTHO05D006216 5.3e-09 63.9 72 47.2
FAN23G1700 Fragaria x ananassa HOM05D000786 ORTHO05D006216 6.9e-09 63.5 72 47.2
Cc10_g15160 Coffea canephora HOM05D000786 ORTHO05D006216 9.0e-09 63.2 65 46.2
FvH4_1g23170 Fragaria vesca HOM05D000786 ORTHO05D006216 9.0e-09 63.2 72 47.2
FAN19G0145 Fragaria x ananassa HOM05D000786 ORTHO05D006216 9.0e-09 63.2 72 47.2
MD15G1335800 Malus domestica HOM05D000786 ORTHO05D006216 9.0e-09 63.2 70 54.3
CiPaw.16G009100 Carya illinoinensis HOM05D000786 ORTHO05D006216 1.2e-08 62.8 65 44.6
Ciclev10003573m.g Citrus clementina HOM05D000786 ORTHO05D006216 1.5e-08 62.4 65 44.6
Dinv41045 Davidia involucrata HOM05D000786 ORTHO05D006216 1.5e-08 62.4 65 44.6
FAN26G3223 Fragaria x ananassa HOM05D000786 ORTHO05D006216 1.5e-08 62.4 72 45.8
FAN28G3029 Fragaria x ananassa HOM05D000786 ORTHO05D006216 1.5e-08 62.4 72 45.8
Prupe.8G039100 Prunus persica HOM05D000786 ORTHO05D006216 1.5e-08 62.4 65 46.2
Actinidia31889 Actinidia chinensis HOM05D000786 ORTHO05D006216 2.0e-08 62.0 67 53.7
CSS0019732 Camellia sinensis var. sinensis HOM05D000786 ORTHO05D006216 2.0e-08 62.0 65 44.6
FvH4_2g13100 Fragaria vesca HOM05D000786 ORTHO05D006216 2.0e-08 62.0 65 44.6
FAN15G3470 Fragaria x ananassa HOM05D000786 ORTHO05D006216 2.0e-08 62.0 65 44.6
FAN20G2557 Fragaria x ananassa HOM05D000786 ORTHO05D006216 2.0e-08 62.0 65 44.6
FAN24G2413 Fragaria x ananassa HOM05D000786 ORTHO05D006216 2.0e-08 62.0 65 44.6
FAN27G0158 Fragaria x ananassa HOM05D000786 ORTHO05D006216 2.0e-08 62.0 65 44.6
ECA232G3182 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.4e-08 61.2 66 53.0
COL.COLO4_03470 Corchorus olitorius HOM05D000786 ORTHO05D006216 4.5e-08 60.8 67 52.2
Duzib116G0195 Durio zibethinus HOM05D000786 ORTHO05D006216 4.5e-08 60.8 65 43.1
Thecc.08G158200 Theobroma cacao HOM05D000786 ORTHO05D006216 4.5e-08 60.8 65 43.1
Gohir.A02G063100 Gossypium hirsutum HOM05D000786 ORTHO05D006216 5.8e-08 60.5 66 43.9
Gohir.D02G068800 Gossypium hirsutum HOM05D000786 ORTHO05D006216 5.8e-08 60.5 66 43.9
Gorai.005G077700 Gossypium raimondii HOM05D000786 ORTHO05D006216 5.8e-08 60.5 66 43.9
QL02p038248 Quercus lobata HOM05D000786 ORTHO05D006216 5.8e-08 60.5 65 44.6
Lsat_1_v5_gn_4_138400 Lactuca sativa HOM05D000786 ORTHO05D006216 7.6e-08 60.1 66 51.5
Lalb_Chr08g0238761 Lupinus albus HOM05D000786 ORTHO05D006216 7.6e-08 60.1 66 47.0
MD10G1033400 Malus domestica HOM05D000786 ORTHO05D006216 1.0e-07 59.7 65 46.2
CiPaw.15G013200 Carya illinoinensis HOM05D000786 ORTHO05D006216 1.7e-07 58.9 65 44.6
HanXRQChr15g0493541 Helianthus annuus HOM05D000786 ORTHO05D006216 1.7e-07 58.9 66 51.5
Actinidia17774 Actinidia chinensis HOM05D000786 ORTHO05D006216 2.9e-07 58.2 66 47.0
Atru.chr13.2022 Acer truncatum HOM05D000786 ORTHO05D006216 3.8e-07 57.8 65 46.2
Lj2g0013103 Lotus japonicus HOM05D000786 ORTHO05D006216 3.8e-07 57.8 66 42.4
Manes.12G145200 Manihot esculenta HOM05D000786 ORTHO05D006216 3.8e-07 57.8 67 49.3
Nitab4.5_0004121g0030 Nicotiana tabacum HOM05D000786 ORTHO05D006216 3.8e-07 57.8 67 50.7
Thecc.01G116900 Theobroma cacao HOM05D000786 ORTHO05D006216 3.8e-07 57.8 67 49.3
CANSAT25G1840 Cannabis sativa HOM05D000786 ORTHO05D006216 6.5e-07 57.0 66 45.5
Glyma.20G169300 Glycine max HOM05D000786 ORTHO05D006216 6.5e-07 57.0 65 43.1
Hma1.2p1_0529F.1_g173260 Hydrangea macrophylla HOM05D000786 ORTHO05D006216 6.5e-07 57.0 68 45.6
Sabra05G0071600 Salix brachista HOM05D000786 ORTHO05D006216 6.5e-07 57.0 66 47.0
Sed0000205 Sechium edule HOM05D000786 ORTHO05D006216 6.5e-07 57.0 65 41.5
Glyma.10G222300 Glycine max HOM05D000786 ORTHO05D006216 8.4e-07 56.6 65 43.1
Lj5g0026860 Lotus japonicus HOM05D000786 ORTHO05D006216 8.4e-07 56.6 65 44.6
Potri.007G077500 Populus trichocarpa HOM05D000786 ORTHO05D006216 8.4e-07 56.6 68 48.5
Sabra07G0065500 Salix brachista HOM05D000786 ORTHO05D006216 8.4e-07 56.6 66 50.0
SalBow5G2955 Salvia bowleyana HOM05D000786 ORTHO05D006216 8.4e-07 56.6 67 49.3
TWI34G1146 Tripterygium wilfordii HOM05D000786 ORTHO05D006216 8.4e-07 56.6 65 44.6
CSS0042693 Camellia sinensis var. sinensis HOM05D000786 ORTHO05D006216 1.1e-06 56.2 65 44.6
ClCG08G003150 Citrullus lanatus HOM05D000786 ORTHO05D006216 1.1e-06 56.2 65 41.5
MELO3C024975.2 Cucumis melo HOM05D000786 ORTHO05D006216 1.1e-06 56.2 65 41.5
ClCG01G015870 Citrullus lanatus HOM05D000786 ORTHO05D006216 1.4e-06 55.8 67 46.3
DCAR_011463 Daucus carota HOM05D000786 ORTHO05D006216 1.4e-06 55.8 66 48.5
Medtr1g098310 Medicago truncatula HOM05D000786 ORTHO05D006216 1.4e-06 55.8 66 43.9
Peaxi162Scf00360g10014 Petunia axillaris HOM05D000786 ORTHO05D006216 1.4e-06 55.8 65 44.6
SalBow6G2838 Salvia bowleyana HOM05D000786 ORTHO05D006216 1.4e-06 55.8 65 47.7
Sed0024174 Sechium edule HOM05D000786 ORTHO05D006216 1.4e-06 55.8 65 41.5
PGSC0003DMG402019696 Solanum tuberosum HOM05D000786 ORTHO05D006216 1.4e-06 55.8 66 48.5
MSTRG.3817 Avicennia marina HOM05D000786 ORTHO05D006216 1.9e-06 55.5 66 53.0
CAN.G1248.27 Capsicum annuum HOM05D000786 ORTHO05D006216 1.9e-06 55.5 66 47.0
CsaV3_6G002840 Cucumis sativus L. HOM05D000786 ORTHO05D006216 1.9e-06 55.5 65 41.5
HanXRQChr09g0254011 Helianthus annuus HOM05D000786 ORTHO05D006216 1.9e-06 55.5 66 48.5
Sc16g0004100 Simmondsia chinensis HOM05D000786 ORTHO05D006216 1.9e-06 55.5 55 56.4
TPR.G10805 Trifolium pratense HOM05D000786 ORTHO05D006216 1.9e-06 55.5 65 44.6
Cpa.g.sc49.82 Carica papaya HOM05D000786 ORTHO05D006216 2.5e-06 55.1 65 41.5
Migut.L00056 Erythranthe guttata HOM05D000786 ORTHO05D006216 2.5e-06 55.1 67 46.3
Eucgr.F02688 Eucalyptus grandis HOM05D000786 ORTHO05D006216 4.2e-06 54.3 65 40.0
MBI19_g15944_MAGBIO Magnolia biondii HOM05D000786 ORTHO05D006216 4.2e-06 54.3 65 43.1
Phvul.007G082800 Phaseolus vulgaris HOM05D000786 ORTHO05D006216 4.2e-06 54.3 65 46.2
Solyc04g051470.1 Solanum lycopersicum HOM05D000786 ORTHO05D006216 4.2e-06 54.3 66 47.0
Sopen04g022850 Solanum pennellii HOM05D000786 ORTHO05D006216 4.2e-06 54.3 66 47.0
ATR0800G011 Amborella trichopoda HOM05D000786 ORTHO05D006216 5.5e-06 53.9 66 47.0
Nn5g28813 Nelumbo nucifera HOM05D000786 ORTHO05D006216 5.5e-06 53.9 66 42.4
unitig_0.g1746 Utricularia gibba HOM05D000786 ORTHO05D006216 5.5e-06 53.9 54 51.9
Ah.05g168150 Amaranthus hybridus HOM05D000786 ORTHO05D006216 7.1e-06 53.5 65 44.6
Cc07_g16650 Coffea canephora HOM05D000786 ORTHO05D006216 9.3e-06 53.1 66 50.0


User provided reference genes

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