Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g123570 Amaranthus hybridus HOM05D003192 ORTHO05D003596 1.1e-234 816.6 525 100.0
Ah.03g139960 Amaranthus hybridus HOM05D003192 ORTHO05D003596 4.4e-143 512.3 554 60.8
AUR62017973 Chenopodium quinoa HOM05D003192 ORTHO05D003596 1.1e-117 427.9 582 51.7
AUR62003664 Chenopodium quinoa HOM05D003192 ORTHO05D003596 6.9e-112 408.7 583 56.8
EL10Ac6g15204 Beta vulgaris HOM05D003192 ORTHO05D003596 4.2e-101 372.9 519 51.6
Sc03g0000330 Simmondsia chinensis HOM05D003192 ORTHO05D003596 1.5e-45 188.3 585 30.8
PGR031G3296 Punica granatum HOM05D003192 ORTHO05D003596 6.3e-41 172.9 502 32.1
Gohir.A11G050500 Gossypium hirsutum HOM05D003192 ORTHO05D003596 5.9e-39 166.4 368 35.9
Duzib147G1583 Durio zibethinus HOM05D003192 ORTHO05D003596 7.7e-39 166.0 336 36.9
Duzib187G1957 Durio zibethinus HOM05D003192 ORTHO05D003596 2.5e-37 161.0 336 36.9
Manes.13G100000 Manihot esculenta HOM05D003192 ORTHO05D003596 3.6e-36 157.1 308 39.3
Potri.001G415800 Populus trichocarpa HOM05D003192 ORTHO05D003596 6.1e-36 156.4 313 39.3
CAN.G1344.16 Capsicum annuum HOM05D003192 ORTHO05D003596 1.0e-35 155.6 586 27.6
Potri.011G131500 Populus trichocarpa HOM05D003192 ORTHO05D003596 1.0e-35 155.6 311 37.3
Nitab4.5_0004153g0070 Nicotiana tabacum HOM05D003192 ORTHO05D003596 4.0e-35 153.7 570 27.7
Rhsim10G0172900 Rhododendron simsii HOM05D003192 ORTHO05D003596 8.8e-35 152.5 342 36.5
Gohir.D11G053800 Gossypium hirsutum HOM05D003192 ORTHO05D003596 5.7e-34 149.8 337 34.7
Nitab4.5_0007624g0010 Nicotiana tabacum HOM05D003192 ORTHO05D003596 7.5e-34 149.4 570 27.4
BcaB03g12309 Brassica carinata HOM05D003192 ORTHO05D003596 4.9e-33 146.7 332 35.2
Gohir.A11G207000 Gossypium hirsutum HOM05D003192 ORTHO05D003596 8.3e-33 146.0 318 35.5
Sp7g35710 Schrenkiella parvula HOM05D003192 ORTHO05D003596 8.3e-33 146.0 331 36.6
Gohir.D11G216300 Gossypium hirsutum HOM05D003192 ORTHO05D003596 1.1e-32 145.6 315 36.5
Peaxi162Scf00191g00034 Petunia axillaris HOM05D003192 ORTHO05D003596 3.1e-32 144.1 541 27.2
THA.LOC104807671 Tarenaya hassleriana HOM05D003192 ORTHO05D003596 7.0e-32 142.9 525 28.4
Gorai.007G058900 Gossypium raimondii HOM05D003192 ORTHO05D003596 9.2e-32 142.5 337 34.1
Aqoxy5G01385 Aquilegia oxysepala HOM05D003192 ORTHO05D003596 1.2e-31 142.1 303 34.3
Actinidia25308 Actinidia chinensis HOM05D003192 ORTHO05D003596 1.7e-30 138.3 545 27.0
Aa31LG6G15020 Aethionema arabicum HOM05D003192 ORTHO05D003596 1.7e-30 138.3 331 34.4
MD01G1039400 Malus domestica HOM05D003192 ORTHO05D003596 1.7e-30 138.3 225 42.2
CARHR246480 Cardamine hirsuta HOM05D003192 ORTHO05D003596 2.3e-30 137.9 337 33.8
Thhalv10027141m.g Eutrema salsugineum HOM05D003192 ORTHO05D003596 2.3e-30 137.9 345 35.7
SGA_v2.0_scaffold115G32126 Striga asiatica HOM05D003192 ORTHO05D003596 1.9e-29 134.8 452 28.1
Carub.0007s0215 Capsella rubella HOM05D003192 ORTHO05D003596 4.3e-29 133.7 232 41.8
BcaC01g00350 Brassica carinata HOM05D003192 ORTHO05D003596 7.3e-29 132.9 228 43.0
BraA08t34266Z Brassica rapa HOM05D003192 ORTHO05D003596 9.5e-29 132.5 229 42.8
Actinidia02392 Actinidia chinensis HOM05D003192 ORTHO05D003596 1.2e-28 132.1 331 32.9
BolC3t20120H Brassica oleracea HOM05D003192 ORTHO05D003596 1.2e-28 132.1 228 43.0
CiPaw.05G029500 Carya illinoinensis HOM05D003192 ORTHO05D003596 2.8e-28 131.0 482 28.4
C03p78760 Brassica napus HOM05D003192 ORTHO05D003596 3.6e-28 130.6 234 42.3
Dinv16002 Davidia involucrata HOM05D003192 ORTHO05D003596 6.1e-28 129.8 433 28.9
Sed0023722 Sechium edule HOM05D003192 ORTHO05D003596 6.1e-28 129.8 324 33.0
PGSC0003DMG400016132 Solanum tuberosum HOM05D003192 ORTHO05D003596 6.1e-28 129.8 337 33.2
Gorai.007G232500 Gossypium raimondii HOM05D003192 ORTHO05D003596 8.0e-28 129.4 244 38.5
A08p23070 Brassica napus HOM05D003192 ORTHO05D003596 1.4e-27 128.6 225 42.2
MBI16_g12462_MAGBIO Magnolia biondii HOM05D003192 ORTHO05D003596 2.3e-27 127.9 536 28.2
Thecc.01G090500 Theobroma cacao HOM05D003192 ORTHO05D003596 2.3e-27 127.9 343 33.2
Eucgr.I00559 Eucalyptus grandis HOM05D003192 ORTHO05D003596 3.0e-27 127.5 510 28.8
AUR62027110 Chenopodium quinoa HOM05D003192 ORTHO05D003596 4.0e-27 127.1 340 30.9
Nitab4.5_0008998g0020 Nicotiana tabacum HOM05D003192 ORTHO05D003596 4.0e-27 127.1 314 31.8
Cc07_g14090 Coffea canephora HOM05D003192 ORTHO05D003596 6.8e-27 126.3 235 39.1
CSS0015843 Camellia sinensis var. sinensis HOM05D003192 ORTHO05D003596 8.9e-27 125.9 298 32.9
AT4G38062 Arabidopsis thaliana HOM05D003192 ORTHO05D003596 2.0e-26 124.8 331 33.8
CSS0015283 Camellia sinensis var. sinensis HOM05D003192 ORTHO05D003596 2.6e-26 124.4 295 32.9
Hma1.2p1_1093F.1_g256220 Hydrangea macrophylla HOM05D003192 ORTHO05D003596 2.6e-26 124.4 328 33.2
MSTRG.20280 Avicennia marina HOM05D003192 ORTHO05D003596 4.4e-26 123.6 338 31.1
ECA234G2607 Erigeron canadensis HOM05D003192 ORTHO05D003596 5.7e-26 123.2 216 36.1
SGA_v2.0_scaffold83G26376 Striga asiatica HOM05D003192 ORTHO05D003596 5.7e-26 123.2 275 33.8
ClCG01G018360 Citrullus lanatus HOM05D003192 ORTHO05D003596 7.5e-26 122.9 323 33.1
Sc08g0003910 Simmondsia chinensis HOM05D003192 ORTHO05D003596 9.8e-26 122.5 223 36.8
Sabra11G0118600 Salix brachista HOM05D003192 ORTHO05D003596 1.3e-25 122.1 232 37.9
CANSAT01G3047 Cannabis sativa HOM05D003192 ORTHO05D003596 2.2e-25 121.3 225 37.3
Nitab4.5_0002017g0020 Nicotiana tabacum HOM05D003192 ORTHO05D003596 2.2e-25 121.3 315 31.7
Migut.B00551 Erythranthe guttata HOM05D003192 ORTHO05D003596 2.9e-25 120.9 363 30.9
Sed0023170 Sechium edule HOM05D003192 ORTHO05D003596 2.9e-25 120.9 350 31.4
Ah.01g007410 Amaranthus hybridus HOM05D003192 ORTHO05D003596 3.7e-25 120.6 300 30.7
CSS0047518 Camellia sinensis var. sinensis HOM05D003192 ORTHO05D003596 3.7e-25 120.6 327 31.8
Phvul.006G201900 Phaseolus vulgaris HOM05D003192 ORTHO05D003596 3.7e-25 120.6 197 38.1
QL06p035789 Quercus lobata HOM05D003192 ORTHO05D003596 3.7e-25 120.6 232 38.8
MELO3C007714.2 Cucumis melo HOM05D003192 ORTHO05D003596 4.9e-25 120.2 323 32.5
HanXRQChr10g0289971 Helianthus annuus HOM05D003192 ORTHO05D003596 6.4e-25 119.8 216 36.1
VMungo0299G0001 Vigna mungo HOM05D003192 ORTHO05D003596 8.3e-25 119.4 197 39.1
CiPaw.08G140100 Carya illinoinensis HOM05D003192 ORTHO05D003596 1.4e-24 118.6 328 30.8
CsaV3_6G044990 Cucumis sativus L. HOM05D003192 ORTHO05D003596 2.4e-24 117.9 323 32.2
FAN23G2850 Fragaria x ananassa HOM05D003192 ORTHO05D003596 3.2e-24 117.5 192 41.1
Prupe.6G201700 Prunus persica HOM05D003192 ORTHO05D003596 4.1e-24 117.1 232 37.1
PGSC0003DMG400037454 Solanum tuberosum HOM05D003192 ORTHO05D003596 4.1e-24 117.1 335 29.9
AUR62012886 Chenopodium quinoa HOM05D003192 ORTHO05D003596 1.2e-23 115.5 341 29.6
Atru.chr6.1263 Acer truncatum HOM05D003192 ORTHO05D003596 2.0e-23 114.8 318 33.0
DCAR_014184 Daucus carota HOM05D003192 ORTHO05D003596 3.5e-23 114.0 514 26.7
Lj5C230T2 Lonicera japonica HOM05D003192 ORTHO05D003596 7.8e-23 112.8 477 27.5
PSO210G4022 Papaver somniferum HOM05D003192 ORTHO05D003596 7.8e-23 112.8 339 29.8
unitig_32.g10709 Utricularia gibba HOM05D003192 ORTHO05D003596 1.0e-22 112.5 359 27.3
arahy.Tifrunner.gnm1.ann1.CWW4UK Arachis hypogaea HOM05D003192 ORTHO05D003596 1.7e-22 111.7 543 24.5
MD05G1047500 Malus domestica HOM05D003192 ORTHO05D003596 1.7e-22 111.7 478 25.9
ATR0767G239 Amborella trichopoda HOM05D003192 ORTHO05D003596 3.0e-22 110.9 235 38.3
arahy.Tifrunner.gnm1.ann1.T6BZ3D Arachis hypogaea HOM05D003192 ORTHO05D003596 3.0e-22 110.9 542 25.3
TAR381G0021 Trochodendron aralioides HOM05D003192 ORTHO05D003596 5.0e-22 110.2 494 26.1
MSTRG.15688 Avicennia marina HOM05D003192 ORTHO05D003596 6.6e-22 109.8 312 32.4
EL10Ac9g22072 Beta vulgaris HOM05D003192 ORTHO05D003596 8.6e-22 109.4 331 29.9
Glyma.15G058300 Glycine max HOM05D003192 ORTHO05D003596 8.6e-22 109.4 243 34.2
Sopen10g017840 Solanum pennellii HOM05D003192 ORTHO05D003596 1.1e-21 109.0 216 33.3
Ca_00164_v3 Cicer arietinum L. HOM05D003192 ORTHO05D003596 1.5e-21 108.6 198 38.9
Glyma.13G256600 Glycine max HOM05D003192 ORTHO05D003596 1.5e-21 108.6 223 35.9
Nn5g29883 Nelumbo nucifera HOM05D003192 ORTHO05D003596 4.3e-21 107.1 522 25.7
vmacro13008 Vaccinium macrocarpon HOM05D003192 ORTHO05D003596 4.3e-21 107.1 300 31.7
Haze_03871 Corylus avellana HOM05D003192 ORTHO05D003596 7.3e-21 106.3 233 36.5
Lalb_Chr20g0122921 Lupinus albus HOM05D003192 ORTHO05D003596 9.5e-21 105.9 304 29.3
Os03g0691500 Oryza sativa ssp. japonica HOM05D003192 ORTHO05D003596 1.6e-20 105.1 216 36.6
Peaxi162Scf00003g00329 Petunia axillaris HOM05D003192 ORTHO05D003596 1.6e-20 105.1 313 28.4
Solyc10g047540.3 Solanum lycopersicum HOM05D003192 ORTHO05D003596 2.1e-20 104.8 231 32.0
Atru.chr3.1246 Acer truncatum HOM05D003192 ORTHO05D003596 6.2e-20 103.2 233 36.1
Ciclev10024755m.g Citrus clementina HOM05D003192 ORTHO05D003596 6.2e-20 103.2 233 36.5
CANSAT54G2948 Cannabis sativa HOM05D003192 ORTHO05D003596 2.3e-19 101.3 338 27.8
QL11p025213 Quercus lobata HOM05D003192 ORTHO05D003596 3.1e-19 100.9 338 29.9
HPP92_014211 Vanilla planifolia HOM05D003192 ORTHO05D003596 3.1e-19 100.9 209 35.4
Gohir.A02G144501 Gossypium hirsutum HOM05D003192 ORTHO05D003596 5.2e-19 100.1 218 34.9
RcHm_v2.0_Chr2g0111201 Rosa chinensis HOM05D003192 ORTHO05D003596 6.8e-19 99.8 235 34.9
Cfa005735 Carpinus fangiana HOM05D003192 ORTHO05D003596 1.5e-18 98.6 193 37.8
Medtr5g032080 Medicago truncatula HOM05D003192 ORTHO05D003596 1.5e-18 98.6 480 25.6
Ca_22609_v3 Cicer arietinum L. HOM05D003192 ORTHO05D003596 2.0e-18 98.2 338 28.1
Ca_22705_v3 Cicer arietinum L. HOM05D003192 ORTHO05D003596 2.6e-18 97.8 474 25.5
Lj4g0006883 Lotus japonicus HOM05D003192 ORTHO05D003596 3.4e-18 97.4 332 28.9
TAR625G0274 Trochodendron aralioides HOM05D003192 ORTHO05D003596 3.4e-18 97.4 259 33.6
Actinidia06514 Actinidia chinensis HOM05D003192 ORTHO05D003596 5.8e-18 96.7 340 29.1
Cfa006881 Carpinus fangiana HOM05D003192 ORTHO05D003596 7.5e-18 96.3 233 34.3
FvH4_1g19631 Fragaria vesca HOM05D003192 ORTHO05D003596 7.5e-18 96.3 226 34.1
SEGI_05807 Sequoiadendron giganteum HOM05D003192 ORTHO05D003596 7.5e-18 96.3 349 27.8
TWI53G1641 Tripterygium wilfordii HOM05D003192 ORTHO05D003596 9.8e-18 95.9 233 35.2
FAN19G3065 Fragaria x ananassa HOM05D003192 ORTHO05D003596 1.3e-17 95.5 226 34.1
Zm00001eb053540 Zea mays HOM05D003192 ORTHO05D003596 2.2e-17 94.7 221 31.7
GSVIVG01005928001 Vitis vinifera HOM05D003192 ORTHO05D003596 2.9e-17 94.4 559 24.2
Phvul.003G289000 Phaseolus vulgaris HOM05D003192 ORTHO05D003596 3.7e-17 94.0 338 28.1
FAN28G2653 Fragaria x ananassa HOM05D003192 ORTHO05D003596 4.9e-17 93.6 223 33.6
Glyma.08G279600 Glycine max HOM05D003192 ORTHO05D003596 4.9e-17 93.6 312 27.9
Gorai.003G037800 Gossypium raimondii HOM05D003192 ORTHO05D003596 4.9e-17 93.6 218 35.8
FAN26G1555 Fragaria x ananassa HOM05D003192 ORTHO05D003596 1.1e-16 92.4 226 33.6
TPR.G39012 Trifolium pratense HOM05D003192 ORTHO05D003596 1.1e-16 92.4 498 25.7
Psat1g214080 Pisum sativum HOM05D003192 ORTHO05D003596 3.2e-16 90.9 584 24.0
VMungo0251G1378 Vigna mungo HOM05D003192 ORTHO05D003596 3.2e-16 90.9 339 27.7
arahy.Tifrunner.gnm1.ann1.88QBIW Arachis hypogaea HOM05D003192 ORTHO05D003596 5.4e-16 90.1 339 27.4
Sopen11g005420 Solanum pennellii HOM05D003192 ORTHO05D003596 5.4e-16 90.1 225 31.6
TWI77G0115 Tripterygium wilfordii HOM05D003192 ORTHO05D003596 5.4e-16 90.1 313 28.8
Dinv13601 Davidia involucrata HOM05D003192 ORTHO05D003596 7.0e-16 89.7 337 29.1
Gohir.D03G036033 Gossypium hirsutum HOM05D003192 ORTHO05D003596 7.0e-16 89.7 215 35.3
Zm00001eb217110 Zea mays HOM05D003192 ORTHO05D003596 9.2e-16 89.4 237 33.8
AL7G12570 Arabidopsis lyrata HOM05D003192 ORTHO05D003596 1.2e-15 89.0 333 30.6
Solyc11g010620.3 Solanum lycopersicum HOM05D003192 ORTHO05D003596 1.6e-15 88.6 227 31.3
arahy.Tifrunner.gnm1.ann1.Y4FDPH Arachis hypogaea HOM05D003192 ORTHO05D003596 3.5e-15 87.4 339 26.8
CDE01G0670 Ceratophyllum demersum HOM05D003192 ORTHO05D003596 6.0e-15 86.7 190 34.2
Glyma.18G147000 Glycine max HOM05D003192 ORTHO05D003596 1.0e-14 85.9 338 27.8
DCAR_021912 Daucus carota HOM05D003192 ORTHO05D003596 1.3e-14 85.5 208 31.7
TPR.G14606 Trifolium pratense HOM05D003192 ORTHO05D003596 1.3e-14 85.5 346 29.2
PSO170G5608 Papaver somniferum HOM05D003192 ORTHO05D003596 2.3e-14 84.7 148 39.2
Migut.K00798 Erythranthe guttata HOM05D003192 ORTHO05D003596 6.6e-14 83.2 452 28.1
Haze_10522 Corylus avellana HOM05D003192 ORTHO05D003596 1.1e-13 82.4 223 33.2
Ah.01g023960 Amaranthus hybridus HOM05D003192 ORTHO05D003596 9.5e-13 79.3 222 31.5
Mapoly0094s0016 Marchantia polymorpha HOM05D003192 ORTHO05D003596 3.6e-12 77.4 244 28.3
PSO063G1758 Papaver somniferum HOM05D003192 ORTHO05D003596 4.7e-12 77.0 313 24.9
Medtr2g009620 Medicago truncatula HOM05D003192 ORTHO05D003596 6.2e-12 76.6 592 24.0
Dinv29065 Davidia involucrata HOM05D003192 ORTHO05D003596 8.1e-12 76.3 193 31.6
Lsat_1_v5_gn_5_109820 Lactuca sativa HOM05D003192 ORTHO05D003596 8.1e-12 76.3 260 29.2
PSO782G1877 Papaver somniferum HOM05D003192 ORTHO05D003596 1.1e-11 75.9 259 29.0
Lalb_Chr05g0216371 Lupinus albus HOM05D003192 ORTHO05D003596 1.4e-11 75.5 239 32.2
Glyma.01G023100 Glycine max HOM05D003192 ORTHO05D003596 1.8e-11 75.1 153 34.6
Manes.10G098500 Manihot esculenta HOM05D003192 ORTHO05D003596 6.8e-11 73.2 208 31.7
Prupe.8G069900 Prunus persica HOM05D003192 ORTHO05D003596 6.8e-11 73.2 467 23.8
Dinv24148 Davidia involucrata HOM05D003192 ORTHO05D003596 1.5e-10 72.0 359 27.0
Psat4g119640 Pisum sativum HOM05D003192 ORTHO05D003596 1.5e-10 72.0 232 29.3
Lj2P534T21 Lonicera japonica HOM05D003192 ORTHO05D003596 2.6e-10 71.2 144 37.5
HPP92_026470 Vanilla planifolia HOM05D003192 ORTHO05D003596 2.6e-10 71.2 310 26.1
ECA233G2454 Erigeron canadensis HOM05D000169 ORTHO05D003596 6.4e-09 66.6 153 34.6
Dinv20194 Davidia involucrata HOM05D003192 ORTHO05D003596 8.3e-09 66.2 106 39.6
FAN24G0742 Fragaria x ananassa HOM05D003192 ORTHO05D003596 8.3e-09 66.2 453 23.8
Oeu063542.1 Olea europaea HOM05D003192 ORTHO05D003596 1.4e-08 65.5 266 26.7
Sabra16G0282500 Salix brachista HOM05D003192 ORTHO05D003596 1.9e-08 65.1 268 27.2
Glyma.09G199232 Glycine max HOM05D003192 ORTHO05D003596 3.2e-08 64.3 96 42.7
HanXRQChr11g0346961 Helianthus annuus HOM05D003192 ORTHO05D003596 1.2e-07 62.4 493 22.9
QL11p025224 Quercus lobata HOM05D003192 ORTHO05D003596 1.2e-07 62.4 515 23.9
arahy.Tifrunner.gnm1.ann1.ND4N8X Arachis hypogaea HOM05D003192 ORTHO05D003596 2.3e-06 58.2 424 21.7
arahy.Tifrunner.gnm1.ann1.QT15T4 Arachis hypogaea HOM05D003192 ORTHO05D003596 2.3e-06 58.2 424 21.7
Pp3c14_17140 Physcomitrium patens HOM05D003192 ORTHO05D003596 5.1e-06 57.0 120 34.2


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