Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g123330 Amaranthus hybridus HOM05D006745 ORTHO05D008449 6.2e-120 434.1 215 100.0
AUR62003702 Chenopodium quinoa HOM05D006745 ORTHO05D008449 1.1e-95 353.6 223 79.4
EL10Ac6g15168 Beta vulgaris HOM05D006745 ORTHO05D008449 6.1e-91 337.8 226 74.8
Sc22g0002270 Simmondsia chinensis HOM05D006745 ORTHO05D008449 6.3e-88 327.8 217 72.4
RcHm_v2.0_Chr2g0098641 Rosa chinensis HOM05D006745 ORTHO05D008449 7.7e-86 320.9 216 71.3
FAN19G0356 Fragaria x ananassa HOM05D006745 ORTHO05D008449 1.9e-84 316.2 217 71.0
TWI73G1304 Tripterygium wilfordii HOM05D006745 ORTHO05D008449 7.2e-84 314.3 213 72.3
Actinidia28725 Actinidia chinensis HOM05D006745 ORTHO05D008449 1.2e-83 313.5 218 70.2
MD15G1238900 Malus domestica HOM05D006745 ORTHO05D008449 3.6e-83 312.0 217 70.5
vmacro18434 Vaccinium macrocarpon HOM05D006745 ORTHO05D008449 1.8e-82 309.7 214 71.0
Rhsim08G0031100 Rhododendron simsii HOM05D006745 ORTHO05D008449 4.0e-82 308.5 208 72.1
Ciclev10026368m.g Citrus clementina HOM05D006745 ORTHO05D008449 6.7e-82 307.8 214 69.2
Potri.005G109000 Populus trichocarpa HOM05D006745 ORTHO05D008449 8.8e-82 307.4 213 69.5
HanXRQChr16g0531741 Helianthus annuus HOM05D006745 ORTHO05D008449 1.1e-81 307.0 213 69.0
FAN23G2677 Fragaria x ananassa HOM05D006745 ORTHO05D008449 2.6e-81 305.8 217 69.1
CSS0026839 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 3.3e-81 305.4 210 71.0
GSVIVG01007224001 Vitis vinifera HOM05D006745 ORTHO05D008449 3.3e-81 305.4 218 68.8
Eucgr.I02315 Eucalyptus grandis HOM05D006745 ORTHO05D008449 4.4e-81 305.1 217 69.6
Oeu058205.1 Olea europaea HOM05D006745 ORTHO05D008449 4.4e-81 305.1 214 71.0
Oeu058207.1 Olea europaea HOM05D006745 ORTHO05D008449 4.4e-81 305.1 214 71.0
Cfa007050 Carpinus fangiana HOM05D006745 ORTHO05D008449 5.7e-81 304.7 214 69.2
A09p13970 Brassica napus HOM05D006745 ORTHO05D008449 7.5e-81 304.3 224 66.5
FAN26G1827 Fragaria x ananassa HOM05D006745 ORTHO05D008449 7.5e-81 304.3 218 69.3
QL06p051396 Quercus lobata HOM05D006745 ORTHO05D008449 7.5e-81 304.3 214 70.1
Manes.01G150100 Manihot esculenta HOM05D006745 ORTHO05D008449 9.7e-81 303.9 216 68.1
THA.LOC104817830 Tarenaya hassleriana HOM05D006745 ORTHO05D008449 9.7e-81 303.9 212 71.7
CsaV3_6G047410 Cucumis sativus L. HOM05D006745 ORTHO05D008449 1.7e-80 303.1 214 68.2
Gohir.A11G041100 Gossypium hirsutum HOM05D006745 ORTHO05D008449 1.7e-80 303.1 222 65.3
Nn6g31942 Nelumbo nucifera HOM05D006745 ORTHO05D008449 1.7e-80 303.1 214 69.2
MELO3C007934.2 Cucumis melo HOM05D006745 ORTHO05D008449 2.2e-80 302.8 222 66.2
BcaC04g22678 Brassica carinata HOM05D006745 ORTHO05D008449 2.8e-80 302.4 224 67.0
BolC9t54579H Brassica oleracea HOM05D006745 ORTHO05D008449 2.8e-80 302.4 224 67.0
Gohir.D11G044400 Gossypium hirsutum HOM05D006745 ORTHO05D008449 2.8e-80 302.4 222 64.9
Gorai.007G047700 Gossypium raimondii HOM05D006745 ORTHO05D008449 2.8e-80 302.4 222 64.9
CSS0046970 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 4.8e-80 301.6 210 70.0
CAN.G576.2 Capsicum annuum HOM05D006745 ORTHO05D008449 6.3e-80 301.2 214 69.6
BcaB07g31542 Brassica carinata HOM05D006745 ORTHO05D008449 8.2e-80 300.8 216 68.5
Lsat_1_v5_gn_3_71521 Lactuca sativa HOM05D006745 ORTHO05D008449 1.1e-79 300.4 211 68.2
Solyc02g061950.4 Solanum lycopersicum HOM05D006745 ORTHO05D008449 1.1e-79 300.4 214 69.6
PGR119G0426 Punica granatum HOM05D006745 ORTHO05D008449 1.4e-79 300.1 225 67.6
VMungo1215G1582 Vigna mungo HOM05D006745 ORTHO05D008449 2.4e-79 299.3 211 68.2
Lj2A482T63 Lonicera japonica HOM05D006745 ORTHO05D008449 3.1e-79 298.9 214 70.1
PGSC0003DMG401023885 Solanum tuberosum HOM05D006745 ORTHO05D008449 4.1e-79 298.5 214 69.2
Phvul.002G105300 Phaseolus vulgaris HOM05D006745 ORTHO05D008449 1.2e-78 297.0 213 66.7
PSO541G1183 Papaver somniferum HOM05D006745 ORTHO05D008449 1.6e-78 296.6 217 68.2
Sopen02g012910 Solanum pennellii HOM05D006745 ORTHO05D008449 1.6e-78 296.6 214 69.2
Glyma.01G163200 Glycine max HOM05D006745 ORTHO05D008449 2.7e-78 295.8 213 67.1
AL2G11270 Arabidopsis lyrata HOM05D006745 ORTHO05D008449 5.9e-78 294.7 215 67.9
arahy.Tifrunner.gnm1.ann1.DU2BQF Arachis hypogaea HOM05D006745 ORTHO05D008449 1.0e-77 293.9 213 67.1
arahy.Tifrunner.gnm1.ann1.EE1FTG Arachis hypogaea HOM05D006745 ORTHO05D008449 1.0e-77 293.9 213 67.1
Carub.0002s0099 Capsella rubella HOM05D006745 ORTHO05D008449 1.7e-77 293.1 216 67.1
Aa31LG2G1020 Aethionema arabicum HOM05D006745 ORTHO05D008449 2.2e-77 292.7 212 67.5
Sed0008453 Sechium edule HOM05D006745 ORTHO05D008449 2.2e-77 292.7 212 66.0
Nitab4.5_0000188g0160 Nicotiana tabacum HOM05D006745 ORTHO05D008449 2.9e-77 292.4 244 59.8
CANSAT01G0215 Cannabis sativa HOM05D006745 ORTHO05D008449 3.8e-77 292.0 214 66.8
CiPaw.07G062000 Carya illinoinensis HOM05D006745 ORTHO05D008449 3.8e-77 292.0 203 70.0
ECA246G0119 Erigeron canadensis HOM05D006745 ORTHO05D008449 3.8e-77 292.0 211 65.9
Migut.N00678 Erythranthe guttata HOM05D006745 ORTHO05D008449 5.0e-77 291.6 217 65.0
BcaC04g22675 Brassica carinata HOM05D006745 ORTHO05D008449 8.5e-77 290.8 226 64.6
PSO675G1483 Papaver somniferum HOM05D006745 ORTHO05D008449 1.1e-76 290.4 206 68.0
DCAR_023133 Daucus carota HOM05D006745 ORTHO05D008449 3.2e-76 288.9 215 65.1
Prupe.7G173600 Prunus persica HOM05D006745 ORTHO05D008449 4.2e-76 288.5 217 67.7
Haze_03682 Corylus avellana HOM05D006745 ORTHO05D008449 5.5e-76 288.1 200 69.0
Sabra05G0089300 Salix brachista HOM05D006745 ORTHO05D008449 5.5e-76 288.1 204 68.6
Lj2g0007566 Lotus japonicus HOM05D006745 ORTHO05D008449 7.2e-76 287.7 213 64.8
Os02g0120300 Oryza sativa ssp. japonica HOM05D006745 ORTHO05D008449 2.1e-75 286.2 222 63.1
Cc07_g11200 Coffea canephora HOM05D006745 ORTHO05D008449 6.1e-75 284.6 191 70.7
SGA_v2.0_scaffold77G25309 Striga asiatica HOM05D006745 ORTHO05D008449 8.0e-75 284.3 214 65.4
TPR.G25110 Trifolium pratense HOM05D006745 ORTHO05D008449 1.0e-74 283.9 212 62.7
Ca_24936_v3 Cicer arietinum L. HOM05D006745 ORTHO05D008449 6.8e-74 281.2 213 65.3
Zm00001eb229980 Zea mays HOM05D006745 ORTHO05D008449 8.8e-74 280.8 217 63.1
Medtr5g022860 Medicago truncatula HOM05D006745 ORTHO05D008449 1.5e-73 280.0 213 62.9
Lalb_Chr09g0321491 Lupinus albus HOM05D006745 ORTHO05D008449 2.0e-73 279.6 213 64.3
Thecc.01G012900 Theobroma cacao HOM05D006745 ORTHO05D008449 3.4e-73 278.9 218 64.2
Psat2g152400 Pisum sativum HOM05D006745 ORTHO05D008449 1.3e-72 276.9 213 62.4
Aqoxy6G02103 Aquilegia oxysepala HOM05D006745 ORTHO05D008449 6.3e-72 274.6 218 61.0
HPP92_012950 Vanilla planifolia HOM05D006745 ORTHO05D008449 8.3e-72 274.2 218 61.0
Atru.chr3.895 Acer truncatum HOM05D006745 ORTHO05D008449 1.8e-71 273.1 202 67.3
AUR62018011 Chenopodium quinoa HOM05D006745 ORTHO05D008449 3.1e-71 272.3 188 75.0
Duzib147G0156 Durio zibethinus HOM05D006745 ORTHO05D008449 1.3e-69 266.9 214 64.0
ATR0661G256 Amborella trichopoda HOM05D006745 ORTHO05D008449 2.2e-69 266.2 223 58.7
unitig_60.g25574 Utricularia gibba HOM05D006745 ORTHO05D008449 5.0e-69 265.0 257 54.9
ClCG01G020530 Citrullus lanatus HOM05D006745 ORTHO05D008449 1.9e-68 263.1 249 55.4
Sp2g00830 Schrenkiella parvula HOM05D006745 ORTHO05D008449 3.2e-68 262.3 208 65.4
Thhalv10023706m.g Eutrema salsugineum HOM05D006745 ORTHO05D008449 4.2e-68 261.9 204 65.2
AT1G63855 Arabidopsis thaliana HOM05D006745 ORTHO05D008449 5.2e-66 255.0 204 63.7
Atru.chr3.884 Acer truncatum HOM05D006745 ORTHO05D008449 3.7e-64 248.8 174 69.5
Peaxi162Scf00439g00049 Petunia axillaris HOM05D006745 ORTHO05D008449 4.1e-63 245.4 262 53.8
FvH4_1g11230 Fragaria vesca HOM05D006745 ORTHO05D008449 3.8e-61 238.8 168 69.6
FAN28G2493 Fragaria x ananassa HOM05D006745 ORTHO05D008449 1.9e-60 236.5 231 55.4
SalBow3G1250 Salvia bowleyana HOM05D006745 ORTHO05D008449 1.5e-57 226.9 214 57.5
CDE05G1799 Ceratophyllum demersum HOM05D006745 ORTHO05D008449 2.6e-57 226.1 217 56.2
CSS0012608 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 3.5e-54 215.7 200 60.0
Pp3c3_3170 Physcomitrium patens HOM05D006745 ORTHO05D008449 3.0e-53 212.6 213 50.7
Nitab4.5_0002337g0130 Nicotiana tabacum HOM05D006745 ORTHO05D008449 1.1e-52 210.7 197 55.3
SMO340G0117 Selaginella moellendorffii HOM05D006745 ORTHO05D008449 2.3e-50 203.0 212 48.1
Aqoxy278s001 Aquilegia oxysepala HOM05D006745 ORTHO05D008449 8.9e-50 201.1 189 56.1
Mapoly0041s0084 Marchantia polymorpha HOM05D006745 ORTHO05D008449 3.4e-49 199.1 214 48.1
Cpa.g.sc29.52 Carica papaya HOM05D006745 ORTHO05D008449 9.8e-49 197.6 153 62.7
CARHR047310 Cardamine hirsuta HOM05D006745 ORTHO05D008449 8.3e-48 194.5 149 63.8
Sed0011409 Sechium edule HOM05D006745 ORTHO05D008449 4.1e-47 192.2 249 47.0
Pp3c3_3178 Physcomitrium patens HOM05D006745 ORTHO05D008449 1.5e-44 183.7 213 47.4
CARHR047280 Cardamine hirsuta HOM05D006745 ORTHO05D008449 5.8e-41 171.8 127 63.0
arahy.Tifrunner.gnm1.ann1.N8WRPV Arachis hypogaea HOM05D006745 ORTHO05D008449 1.7e-40 170.2 130 63.8
Glyma.02G164500 Glycine max HOM05D006745 ORTHO05D008449 1.7e-40 170.2 200 44.5
BraA09t37044Z Brassica rapa HOM05D006745 ORTHO05D008449 3.0e-37 159.5 108 70.4
MSTRG.17961 Avicennia marina HOM05D006745 ORTHO05D008449 1.9e-36 156.8 167 53.3
Rhsim01G0268300 Rhododendron simsii HOM05D006745 ORTHO05D008449 4.1e-31 139.0 94 68.1
Hund14069 Selenicereus undatus HOM05D006745 ORTHO05D008449 1.3e-29 134.0 134 56.0
Medtr3g096570 Medicago truncatula HOM05D006745 ORTHO05D008449 5.6e-28 128.6 115 55.7
Medtr3g096562 Medicago truncatula HOM05D006745 ORTHO05D008449 4.0e-26 122.5 114 54.4
SEGI_40099 Sequoiadendron giganteum HOM05D006745 ORTHO05D008449 2.2e-24 116.7 86 66.3
Medtr2g078490 Medicago truncatula HOM05D006745 ORTHO05D008449 9.9e-17 91.3 94 50.0
COL.COLO4_22483 Corchorus olitorius HOM05D006745 ORTHO05D008449 2.1e-14 83.6 56 71.4
Glyma.11G080201 Glycine max HOM05D006745 ORTHO05D008449 2.7e-14 83.2 63 60.3
BolC4t24505H Brassica oleracea HOM05D006745 ORTHO05D008449 4.6e-14 82.4 59 67.8
Mapoly0001s0305 Marchantia polymorpha HOM05D002956 ORTHO05D008031 2.2e-08 63.5 165 31.5
SEGI_27117 Sequoiadendron giganteum HOM05D001602 ORTHO05D001470 5.5e-07 58.9 91 44.0
Mapoly0059s0066 Marchantia polymorpha HOM05D001602 ORTHO05D001470 7.1e-07 58.5 88 44.3
TPR.G11875 Trifolium pratense HOM05D002757 ORTHO05D008031 1.2e-06 57.8 139 30.9
Cc08_g01690 Coffea canephora HOM05D001602 ORTHO05D001470 2.7e-06 56.6 111 39.6
Haze_16403 Corylus avellana HOM05D006908 ORTHO05D008662 3.5e-06 56.2 92 39.1
BcaC08g47561 Brassica carinata HOM05D006908 ORTHO05D008662 4.6e-06 55.8 103 35.0
MCO09G596 Micromonas commoda HOM05D002956 ORTHO05D008031 4.6e-06 55.8 144 29.2
CSS0006448 Camellia sinensis var. sinensis HOM05D002956 ORTHO05D008031 7.9e-06 55.1 133 29.3
Dinv36148 Davidia involucrata HOM05D002956 ORTHO05D008031 7.9e-06 55.1 137 27.0


User provided reference genes

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