Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g123290 Amaranthus hybridus HOM05D007707 ORTHO05D009711 4.0e-44 181.0 91 100.0
EL10Ac6g15163 Beta vulgaris HOM05D007707 ORTHO05D009711 9.6e-30 133.3 78 80.8
TWI73G0967 Tripterygium wilfordii HOM05D007707 ORTHO05D009711 1.5e-27 125.9 88 69.3
AUR62018017 Chenopodium quinoa HOM05D007707 ORTHO05D009711 7.6e-27 123.6 91 68.1
AL7G15140 Arabidopsis lyrata HOM05D007707 ORTHO05D009711 2.2e-26 122.1 75 77.3
AT4G35905 Arabidopsis thaliana HOM05D007707 ORTHO05D009711 4.9e-26 120.9 75 77.3
Aa31LG6G12850 Aethionema arabicum HOM05D007707 ORTHO05D009711 4.2e-25 117.9 71 78.9
A03p63940 Brassica napus HOM05D007707 ORTHO05D009711 7.1e-25 117.1 75 70.7
BraA03t15463Z Brassica rapa HOM05D007707 ORTHO05D009711 7.1e-25 117.1 75 70.7
BolC7t46567H Brassica oleracea HOM05D007707 ORTHO05D009711 1.2e-24 116.3 75 73.3
Sp7g33690 Schrenkiella parvula HOM05D007707 ORTHO05D009711 1.6e-24 115.9 75 74.7
Carub.0007s0432 Capsella rubella HOM05D007707 ORTHO05D009711 2.1e-24 115.5 75 74.7
CARHR244300 Cardamine hirsuta HOM05D007707 ORTHO05D009711 2.7e-24 115.2 70 78.6
Thhalv10026722m.g Eutrema salsugineum HOM05D007707 ORTHO05D009711 6.0e-24 114.0 70 75.7
CANSAT01G1439 Cannabis sativa HOM05D007707 ORTHO05D009711 2.3e-23 112.1 75 72.0
Nn6g31960 Nelumbo nucifera HOM05D007707 ORTHO05D009711 2.3e-23 112.1 89 58.4
Dinv08562 Davidia involucrata HOM05D007707 ORTHO05D009711 3.0e-23 111.7 87 64.4
Sc16g0001900 Simmondsia chinensis HOM05D007707 ORTHO05D009711 3.0e-23 111.7 84 69.0
Cc07_g11150 Coffea canephora HOM05D007707 ORTHO05D009711 3.9e-23 111.3 86 60.5
CiPaw.07G061600 Carya illinoinensis HOM05D007707 ORTHO05D009711 5.1e-23 110.9 86 62.8
THA.LOC104804277 Tarenaya hassleriana HOM05D007707 ORTHO05D009711 5.1e-23 110.9 69 76.8
Ciclev10026827m.g Citrus clementina HOM05D007707 ORTHO05D009711 8.7e-23 110.2 83 65.1
Hma1.2p1_0869F.1_g230620 Hydrangea macrophylla HOM05D007707 ORTHO05D009711 1.1e-22 109.8 69 71.0
COL.COLO4_22472 Corchorus olitorius HOM05D007707 ORTHO05D009711 1.5e-22 109.4 87 62.1
Manes.01G149600 Manihot esculenta HOM05D007707 ORTHO05D009711 1.5e-22 109.4 83 63.9
Thecc.01G013500 Theobroma cacao HOM05D007707 ORTHO05D009711 2.5e-22 108.6 87 59.8
Gohir.D11G180000 Gossypium hirsutum HOM05D007707 ORTHO05D009711 3.3e-22 108.2 87 60.9
Gorai.007G191900 Gossypium raimondii HOM05D007707 ORTHO05D009711 3.3e-22 108.2 87 60.9
Cfa007014 Carpinus fangiana HOM05D007707 ORTHO05D009711 4.3e-22 107.8 84 63.1
Haze_03717 Corylus avellana HOM05D007707 ORTHO05D009711 7.4e-22 107.1 83 62.7
vmacro22198 Vaccinium macrocarpon HOM05D007707 ORTHO05D009711 7.4e-22 107.1 86 61.6
Gohir.A11G173000 Gossypium hirsutum HOM05D007707 ORTHO05D009711 9.7e-22 106.7 87 59.8
Nitab4.5_0001561g0120 Nicotiana tabacum HOM05D007707 ORTHO05D009711 1.6e-21 105.9 78 64.1
Prupe.7G172900 Prunus persica HOM05D007707 ORTHO05D009711 2.8e-21 105.1 71 69.0
MELO3C007931.2 Cucumis melo HOM05D007707 ORTHO05D009711 3.7e-21 104.8 71 66.2
Migut.J01748 Erythranthe guttata HOM05D007707 ORTHO05D009711 3.7e-21 104.8 82 62.2
Nitab4.5_0001685g0100 Nicotiana tabacum HOM05D007707 ORTHO05D009711 3.7e-21 104.8 88 61.4
ClCG01G020510 Citrullus lanatus HOM05D007707 ORTHO05D009711 4.8e-21 104.4 71 64.8
MD15G1241100 Malus domestica HOM05D007707 ORTHO05D009711 8.2e-21 103.6 83 61.4
Duzib147G0406 Durio zibethinus HOM05D007707 ORTHO05D009711 2.4e-20 102.1 71 67.6
PGR102G1942 Punica granatum HOM05D007707 ORTHO05D009711 2.4e-20 102.1 71 70.4
QL06p051322 Quercus lobata HOM05D007707 ORTHO05D009711 2.4e-20 102.1 69 69.6
Rhsim10G0207600 Rhododendron simsii HOM05D007707 ORTHO05D009711 2.4e-20 102.1 89 57.3
CsaV3_6G047390 Cucumis sativus L. HOM05D007707 ORTHO05D009711 4.1e-20 101.3 71 64.8
BcaNung05054 Brassica carinata HOM05D007707 ORTHO05D009711 1.5e-19 99.4 76 67.1
Phvul.002G105900 Phaseolus vulgaris HOM05D007707 ORTHO05D009711 1.5e-19 99.4 62 72.6
Sed0012149 Sechium edule HOM05D007707 ORTHO05D009711 1.5e-19 99.4 88 55.7
Peaxi162Scf00635g00914 Petunia axillaris HOM05D007707 ORTHO05D009711 2.0e-19 99.0 71 66.2
Sabra15G0015600 Salix brachista HOM05D007707 ORTHO05D009711 2.0e-19 99.0 65 67.7
Solyc03g033370.3 Solanum lycopersicum HOM05D007707 ORTHO05D009711 3.4e-19 98.2 71 67.6
Glyma.01G163700 Glycine max HOM05D007707 ORTHO05D009711 4.5e-19 97.8 71 63.4
Glyma.11G079800 Glycine max HOM05D007707 ORTHO05D009711 7.6e-19 97.1 71 64.8
MBI08_g05062_MAGBIO Magnolia biondii HOM05D007707 ORTHO05D009711 7.6e-19 97.1 84 56.0
RcHm_v2.0_Chr2g0098761 Rosa chinensis HOM05D007707 ORTHO05D009711 7.6e-19 97.1 82 57.3
Sopen03g006140 Solanum pennellii HOM05D007707 ORTHO05D009711 7.6e-19 97.1 78 65.4
CAN.G354.55 Capsicum annuum HOM05D007707 ORTHO05D009711 1.0e-18 96.7 78 60.3
Lsat_1_v5_gn_3_71080 Lactuca sativa HOM05D007707 ORTHO05D009711 1.0e-18 96.7 54 81.5
FAN19G0536 Fragaria x ananassa HOM05D007707 ORTHO05D009711 1.3e-18 96.3 75 60.0
ECA246G5216 Erigeron canadensis HOM05D007707 ORTHO05D009711 2.9e-18 95.1 71 64.8
Lj2g0020635 Lotus japonicus HOM05D007707 ORTHO05D009711 2.9e-18 95.1 72 65.3
DCAR_011610 Daucus carota HOM05D007707 ORTHO05D009711 3.8e-18 94.7 87 54.0
SGA_v2.0_scaffold36G14291 Striga asiatica HOM05D007707 ORTHO05D009711 5.0e-18 94.4 91 57.1
CDE05G2854 Ceratophyllum demersum HOM05D007707 ORTHO05D009711 6.5e-18 94.0 84 58.3
FAN23G0755 Fragaria x ananassa HOM05D007707 ORTHO05D009711 6.5e-18 94.0 75 58.7
Lalb_Chr09g0321541 Lupinus albus HOM05D007707 ORTHO05D009711 6.5e-18 94.0 84 54.8
FAN28G2511 Fragaria x ananassa HOM05D007707 ORTHO05D009711 1.1e-17 93.2 64 62.5
Oeu056393.1 Olea europaea HOM05D007707 ORTHO05D009711 1.1e-17 93.2 71 59.2
Zm00001eb222710 Zea mays HOM05D007707 ORTHO05D009711 1.1e-17 93.2 71 57.7
Os10g0438700 Oryza sativa ssp. japonica HOM05D007707 ORTHO05D009711 4.2e-17 91.3 57 68.4
arahy.Tifrunner.gnm1.ann1.LEB2TA Arachis hypogaea HOM05D007707 ORTHO05D009711 5.5e-17 90.9 65 61.5
arahy.Tifrunner.gnm1.ann1.URRP40 Arachis hypogaea HOM05D007707 ORTHO05D009711 5.5e-17 90.9 65 61.5
TPR.G10525 Trifolium pratense HOM05D007707 ORTHO05D009711 7.2e-17 90.5 71 59.2
Psat2g152640 Pisum sativum HOM05D007707 ORTHO05D009711 1.6e-16 89.4 62 66.1
Actinidia22948 Actinidia chinensis HOM05D007707 ORTHO05D009711 3.6e-16 88.2 60 71.7
Medtr5g022760 Medicago truncatula HOM05D007707 ORTHO05D009711 3.6e-16 88.2 71 57.7
Hund14067 Selenicereus undatus HOM05D007707 ORTHO05D009711 2.3e-15 85.5 52 73.1
ATR0180G024 Amborella trichopoda HOM05D007707 ORTHO05D009711 3.9e-15 84.7 80 50.0
arahy.Tifrunner.gnm1.ann1.04LXIS Arachis hypogaea HOM05D000001 ORTHO05D009700 3.3e-14 81.6 56 66.1
GSVIVG01006523001 Vitis vinifera HOM05D007707 ORTHO05D009711 4.3e-14 81.3 53 69.8
Pp3c14_18830 Physcomitrium patens HOM05D007707 ORTHO05D009711 9.7e-14 80.1 66 51.5
PGSC0003DMG400022552 Solanum tuberosum HOM05D007707 ORTHO05D009711 4.5e-11 71.2 52 67.3
Eucgr.J02480 Eucalyptus grandis HOM05D007707 ORTHO05D009711 5.9e-11 70.9 58 58.6
C07p61410 Brassica napus HOM05D007707 ORTHO05D009711 8.5e-10 67.0 40 75.0
FvH4_1g11290 Fragaria vesca HOM05D007707 ORTHO05D009711 8.5e-10 67.0 46 60.9
Mapoly0124s0029 Marchantia polymorpha HOM05D007707 ORTHO05D009711 1.4e-09 66.2 46 58.7
SEGI_22054 Sequoiadendron giganteum HOM05D007707 ORTHO05D009711 1.9e-09 65.9 58 44.8
HanXRQChr09g0245181 Helianthus annuus HOM05D007707 ORTHO05D009711 5.5e-09 64.3 74 52.7
HPP92_020736 Vanilla planifolia HOM05D007707 ORTHO05D009711 2.1e-08 62.4 52 57.7
CSS0044701 Camellia sinensis var. sinensis HOM05D007707 ORTHO05D009711 6.1e-08 60.8 50 56.0
Oeu060284.1 Olea europaea HOM05D007707 ORTHO05D009711 1.0e-07 60.1 70 47.1
SalBow2G3201 Salvia bowleyana HOM05D007707 ORTHO05D009711 3.0e-07 58.5 41 61.0


User provided reference genes

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