Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 2.7e-137 491.9 233 100.0
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 2.4e-117 425.6 235 84.3
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 1.4e-77 293.5 231 58.4
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 3.6e-73 278.9 231 57.1
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.1e-72 277.3 230 56.5
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 3.1e-72 275.8 231 57.1
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 3.1e-72 275.8 231 57.1
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 3.1e-72 275.8 231 57.1
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.9e-70 269.2 230 56.5
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 6.6e-67 258.1 226 53.5
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 5.6e-66 255.0 233 55.4
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.5e-55 220.3 231 47.2
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.5e-52 209.1 209 47.8
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.8e-51 206.8 233 45.5
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 5.1e-51 205.3 230 43.9
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 5.1e-51 205.3 226 45.6
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 6.7e-51 204.9 230 43.9
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 6.7e-51 204.9 230 43.9
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 1.1e-50 204.1 224 46.0
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 3.3e-50 202.6 233 43.8
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 3.3e-50 202.6 226 45.1
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 9.6e-50 201.1 228 45.2
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 1.3e-49 200.7 227 45.4
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 1.3e-49 200.7 233 43.3
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 1.3e-49 200.7 227 45.4
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.3e-49 200.7 227 45.4
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.1e-49 199.9 227 45.4
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.4e-48 197.2 228 45.2
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.8e-48 196.8 233 42.5
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.4e-48 196.4 227 44.5
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 3.1e-48 196.1 232 44.4
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 3.1e-48 196.1 231 43.3
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 3.4e-47 192.6 226 44.2
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 5.8e-47 191.8 232 43.5
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 1.3e-46 190.7 228 43.4
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 1.7e-46 190.3 231 41.6
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 3.8e-46 189.1 233 44.6
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 4.9e-46 188.7 230 43.9
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 6.5e-46 188.3 139 62.6
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 6.5e-46 188.3 139 62.6
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 8.4e-46 188.0 231 41.6
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 7.1e-45 184.9 231 40.7
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 2.7e-44 183.0 240 43.3
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 3.5e-44 182.6 233 42.5
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 3.5e-44 182.6 233 42.5
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 6.0e-44 181.8 231 42.4
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.8e-43 180.3 198 46.0
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 2.3e-43 179.9 236 41.5
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.9e-43 179.1 226 40.7
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 1.9e-42 176.8 229 41.5
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.3e-42 175.6 228 42.1
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 1.3e-41 174.1 231 40.7
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.7e-41 172.6 226 41.2
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 1.1e-40 171.0 225 41.8
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 6.9e-40 168.3 236 40.3
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 6.9e-40 168.3 210 42.9
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 9.0e-40 167.9 235 39.1
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.0e-40 167.9 229 40.2
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.0e-39 166.8 228 40.4
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.5e-39 165.6 176 47.2
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.6e-39 164.9 226 40.3
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.0e-38 164.5 227 39.2
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.7e-38 163.7 226 39.4
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 1.1e-37 161.0 207 40.6
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 1.4e-37 160.6 164 46.3
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.5e-37 158.7 229 38.9
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.9e-36 154.8 226 37.6
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.3e-35 153.3 231 40.3
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 3.0e-35 152.9 232 40.1
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.5e-34 149.8 226 36.7
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.7e-34 148.7 212 39.6
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 4.8e-33 145.6 163 45.4
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.2e-33 144.8 212 39.2
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.4e-32 143.3 231 35.5
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 9.1e-32 141.4 236 36.0
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-31 141.0 226 37.6
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.5e-31 139.0 228 35.5
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.5e-31 139.0 228 35.5
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 7.7e-31 138.3 141 47.5
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 1.7e-30 137.1 202 40.6
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 5.0e-30 135.6 213 36.2
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 1.9e-29 133.7 226 37.2
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 1.9e-29 133.7 231 35.9
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 9.4e-29 131.3 168 40.5
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 1.6e-28 130.6 210 37.1
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 2.7e-28 129.8 196 37.2
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 2.7e-28 129.8 205 39.0
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 6.1e-28 128.6 205 37.1
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.4e-27 127.5 226 34.1
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 1.8e-27 127.1 127 49.6
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.6e-26 123.2 231 33.3
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 3.3e-26 122.9 224 33.5
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 4.4e-26 122.5 205 38.0
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 4.4e-26 122.5 207 34.8
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 3.7e-25 119.4 137 44.5
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.8e-24 117.1 138 45.7
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 2.4e-24 116.7 124 45.2
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.1e-24 114.8 216 31.9
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 1.5e-23 114.0 231 32.9
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 2.2e-22 110.2 203 36.5
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 6.5e-22 108.6 136 40.4
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 8.5e-22 108.2 306 26.1
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 1.4e-21 107.5 203 36.0
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.5e-21 106.7 229 32.3
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 3.2e-21 106.3 188 36.2
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 4.2e-21 105.9 203 36.5
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 4.2e-21 105.9 181 35.9
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 5.5e-21 105.5 197 31.0
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-20 104.4 224 29.0
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.0e-19 101.3 146 39.7
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.0e-18 97.1 116 42.2
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 1.7e-17 94.0 114 40.4
Ah.16g101350 Amaranthus hybridus HOM05D005276 ORTHO05D038198 3.7e-17 92.8 238 30.7
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 3.7e-17 92.8 130 35.4
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 8.2e-17 91.7 127 39.4
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.1e-16 91.3 223 29.1
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 1.8e-16 90.5 161 37.9
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.0e-16 88.6 136 37.5
AUR62037739 Chenopodium quinoa HOM05D005276 ORTHO05D038198 5.9e-15 85.5 209 32.1
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 1.1e-13 81.3 129 36.4
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 4.4e-10 69.3 82 46.3
RcHm_v2.0_Chr5g0076541 Rosa chinensis HOM05D005276 ORTHO05D006813 5.7e-10 68.9 76 46.1
Phvul.007G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.3e-09 67.8 117 35.9
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 2.8e-09 66.6 139 32.4
TPR.G33511 Trifolium pratense HOM05D005276 ORTHO05D006813 3.7e-09 66.2 68 50.0
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.1e-08 64.7 131 36.6
TPR.G40462 Trifolium pratense HOM05D005276 ORTHO05D006813 1.8e-08 63.9 107 34.6
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.8e-08 63.9 125 34.4
EL10Ac1g02098 Beta vulgaris HOM05D005276 ORTHO05D006813 2.4e-08 63.5 97 36.1
Dinv42430 Davidia involucrata HOM05D005276 ORTHO05D006813 3.8e-06 56.2 81 35.8


User provided reference genes

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