Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g120890 Amaranthus hybridus HOM05D001385 ORTHO05D008760 1.3e-128 463.4 285 100.0
Ah.08g221340 Amaranthus hybridus HOM05D001385 ORTHO05D008760 1.2e-83 313.9 369 58.0
Ah.10g025260 Amaranthus hybridus HOM05D001385 ORTHO05D008760 2.4e-79 299.7 433 53.1
Ah.05g175550 Amaranthus hybridus HOM05D001385 ORTHO05D008760 1.9e-71 273.5 244 75.4
Ah.05g177810 Amaranthus hybridus HOM05D001385 ORTHO05D002073 1.9e-71 273.5 244 75.4
Ah.01g010370 Amaranthus hybridus HOM05D001385 ORTHO05D008760 3.5e-70 269.2 249 60.2
Ah.02g123480 Amaranthus hybridus HOM05D001385 ORTHO05D008760 2.3e-45 186.8 140 63.6
Ah.02g117910 Amaranthus hybridus HOM05D001385 ORTHO05D008760 2.5e-44 183.3 139 63.3
Ah.10g025350 Amaranthus hybridus HOM05D001385 ORTHO05D008760 6.9e-42 175.3 143 58.0
Ah.02g120850 Amaranthus hybridus HOM05D001385 ORTHO05D008760 1.1e-28 131.3 80 72.5
AUR62041104 Chenopodium quinoa HOM05D001385 ORTHO05D008760 5.5e-23 112.5 143 41.3
AUR62039827 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.6e-22 109.8 143 41.3
AUR62040137 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.0e-21 108.2 112 42.9
AUR62014303 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.0e-20 104.0 139 43.9
AUR62042851 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.6e-20 103.6 127 40.9
Ah.13g066910 Amaranthus hybridus HOM05D001385 ORTHO05D008760 3.3e-20 103.2 140 42.9
EL10Ac7g16607 Beta vulgaris HOM05D001385 ORTHO05D008760 9.7e-20 101.7 129 41.9
AUR62034766 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.7e-19 100.9 136 40.4
AUR62028251 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.7e-19 99.8 134 37.3
EL10Ac7g18151 Beta vulgaris HOM05D001385 ORTHO05D008760 6.3e-19 99.0 136 39.7
AUR62042068 Chenopodium quinoa HOM05D001385 ORTHO05D008760 6.3e-19 99.0 143 35.7
EL10Ac6g14499 Beta vulgaris HOM05D001385 ORTHO05D008760 2.4e-18 97.1 140 37.9
EL10Ac1g01131 Beta vulgaris HOM05D001385 ORTHO05D008760 1.2e-17 94.7 115 38.3
EL10Ac1g02060 Beta vulgaris HOM05D001385 ORTHO05D008760 1.6e-17 94.4 99 43.4
EL10Ac6g14099 Beta vulgaris HOM05D001385 ORTHO05D008760 1.6e-17 94.4 115 38.3
AUR62016349 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.6e-17 94.4 111 41.4
EL10Ac4g08961 Beta vulgaris HOM05D000107 ORTHO05D000062 2.6e-17 93.6 159 33.3
EL10Ac8g20048 Beta vulgaris HOM05D000107 ORTHO05D000062 2.6e-17 93.6 159 33.3
EL10Ac3g06245 Beta vulgaris HOM05D001385 ORTHO05D008760 3.5e-17 93.2 159 33.3
EL10Ac2g03907 Beta vulgaris HOM05D001385 ORTHO05D008760 5.9e-17 92.4 143 33.6
EL10Ac4g08894 Beta vulgaris HOM05D001385 ORTHO05D008760 5.9e-17 92.4 143 33.6
EL10Ac8g19807 Beta vulgaris HOM05D001385 ORTHO05D008760 5.9e-17 92.4 143 33.6
EL10Ac9g21092 Beta vulgaris HOM05D001385 ORTHO05D008760 7.7e-17 92.0 143 33.6
EL10Ac3g06415 Beta vulgaris HOM05D001385 ORTHO05D008760 1.3e-16 91.3 159 32.1
AUR62039729 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.7e-16 90.9 139 38.1
Hund06374 Selenicereus undatus HOM05D001385 ORTHO05D004434 1.7e-16 90.9 110 45.5
EL10Ac5g11862 Beta vulgaris HOM05D001385 ORTHO05D008760 2.9e-16 90.1 140 34.3
AUR62013950 Chenopodium quinoa HOM05D001385 ORTHO05D008760 5.0e-16 89.4 110 39.1
AUR62030226 Chenopodium quinoa HOM05D001385 ORTHO05D008760 8.5e-16 88.6 99 45.5
EL10Ac1g01188 Beta vulgaris HOM05D001385 ORTHO05D008760 1.5e-15 87.8 143 32.2
EL10Ac4g09023 Beta vulgaris HOM05D001385 ORTHO05D008760 1.5e-15 87.8 143 32.2
AUR62043841 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.2e-15 86.7 137 34.3
EL10Ac5g12063 Beta vulgaris HOM05D000107 ORTHO05D000062 7.2e-15 85.5 165 31.5
AUR62040146 Chenopodium quinoa HOM05D001385 ORTHO05D008760 9.4e-15 85.1 192 29.2
AUR62002718 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.2e-14 84.7 139 36.0
AUR62041069 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.2e-14 84.7 151 32.5
AUR62010149 Chenopodium quinoa HOM05D001385 ORTHO05D004434 2.7e-14 83.6 98 41.8
AUR62034140 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.7e-14 83.6 135 34.1
EL10Ac9g21493 Beta vulgaris HOM05D001385 ORTHO05D004434 3.6e-14 83.2 126 35.7
AUR62029692 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.0e-13 81.6 143 31.5
AUR62005475 Chenopodium quinoa HOM05D001385 ORTHO05D004434 1.4e-13 81.3 139 35.3
AUR62006161 Chenopodium quinoa HOM05D039261 ORTHO05D008760 5.2e-13 79.3 96 40.6
AUR62026509 Chenopodium quinoa HOM05D001385 ORTHO05D008760 5.2e-13 79.3 140 32.9
EL10Ac1g02023 Beta vulgaris HOM05D001385 ORTHO05D008760 1.2e-12 78.2 81 45.7
AUR62037359 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.2e-12 78.2 125 37.6
EL10Ac1g01824 Beta vulgaris HOM05D001385 ORTHO05D008760 5.7e-12 75.9 83 44.6
EL10Ac7g17195 Beta vulgaris HOM05D000107 ORTHO05D000062 5.7e-12 75.9 123 33.3
AUR62003191 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.7e-12 75.9 214 30.4
EL10Ac5g11714 Beta vulgaris HOM05D000107 ORTHO05D000062 9.7e-12 75.1 71 49.3
AUR62042768 Chenopodium quinoa HOM05D001385 ORTHO05D008760 9.7e-12 75.1 121 36.4
AUR62043185 Chenopodium quinoa HOM05D001385 ORTHO05D008760 9.7e-12 75.1 121 36.4
AUR62043334 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.2e-11 73.9 78 44.9
EL10Ac9g20910 Beta vulgaris HOM05D001385 ORTHO05D008760 6.3e-11 72.4 78 44.9
AUR62013145 Chenopodium quinoa HOM05D001385 ORTHO05D000378 8.3e-11 72.0 130 36.9
EL10Ac2g03369 Beta vulgaris HOM05D000107 ORTHO05D000062 1.4e-10 71.2 82 36.6
AUR62041907 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.8e-10 70.9 134 31.3
Sc10g0006250 Simmondsia chinensis HOM05D001385 ORTHO05D008760 1.8e-10 70.9 57 50.9
Hund00070 Selenicereus undatus HOM05D001385 ORTHO05D004434 9.1e-10 68.6 71 46.5
Hund06375 Selenicereus undatus HOM05D001385 ORTHO05D004434 1.6e-09 67.8 137 33.6
Sc13g0007340 Simmondsia chinensis HOM05D001385 ORTHO05D004434 5.9e-09 65.9 73 42.5
AUR62034385 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.3e-08 64.7 64 40.6
Sc08g0005020 Simmondsia chinensis HOM05D004066 ORTHO05D004434 2.2e-08 63.9 92 34.8
Ah.06g185530 Amaranthus hybridus HOM05D001385 ORTHO05D008760 3.8e-08 63.2 116 61.2
AUR62013585 Chenopodium quinoa HOM05D001385 ORTHO05D008760 6.5e-08 62.4 81 35.8
Hund30625 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.1e-07 61.6 147 30.6
Sc11g0008190 Simmondsia chinensis HOM05D001385 ORTHO05D004434 1.5e-07 61.2 72 41.7
AUR62040186 Chenopodium quinoa HOM05D001385 ORTHO05D004434 1.9e-07 60.8 85 37.6
EL10Ac6g14698 Beta vulgaris HOM05D001385 ORTHO05D000062 4.2e-07 59.7 72 40.3
Hund15061 Selenicereus undatus HOM05D004066 ORTHO05D004434 7.2e-07 58.9 163 27.6
Hund19649 Selenicereus undatus HOM05D004066 ORTHO05D004434 9.4e-07 58.5 181 27.1
Hund28976 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.2e-06 58.2 153 28.8
Hund28977 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.2e-06 58.2 153 28.8
COL.COLO4_05115 Corchorus olitorius HOM05D001309 ORTHO05D004434 1.6e-06 57.8 94 34.0
Hund13844 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.6e-06 57.8 196 27.6
Hund29980 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.6e-06 57.8 181 26.5
Hund18668 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.1e-06 57.4 175 28.0
COL.COLO4_15867 Corchorus olitorius HOM05D001309 ORTHO05D004434 2.7e-06 57.0 94 34.0
COL.COLO4_21802 Corchorus olitorius HOM05D001309 ORTHO05D000385 2.7e-06 57.0 94 34.0
Hund04034 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.7e-06 57.0 196 27.0
Hund11417 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.7e-06 57.0 181 26.5
Hund12908 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.7e-06 57.0 187 26.7
Hund11364 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.6e-06 56.6 192 27.6
Hund14776 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.6e-06 56.6 196 27.6
Hund22617 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.6e-06 56.6 196 27.6
Hund24360 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.6e-06 56.6 181 25.4
Hund30796 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.7e-06 56.2 196 27.0
Hund04453 Selenicereus undatus HOM05D004066 ORTHO05D004434 8.0e-06 55.5 181 26.5


User provided reference genes

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