Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g119300 Amaranthus hybridus HOM05D009559 ORTHO05D006373 0.0e+00 1075.1 530 100.0
Ah.11g040720 Amaranthus hybridus HOM05D009559 ORTHO05D006373 1.0e-211 740.3 516 73.6
Ah.16g108800 Amaranthus hybridus HOM05D009559 ORTHO05D017251 7.5e-199 697.6 546 67.4
Ah.07g198370 Amaranthus hybridus HOM05D009559 ORTHO05D006373 8.2e-198 694.1 467 74.7
Ah.03g144120 Amaranthus hybridus HOM05D009559 ORTHO05D061651 4.3e-154 548.9 448 66.5
Ah.13g067530 Amaranthus hybridus HOM05D009559 ORTHO05D017251 9.9e-143 511.1 553 54.6
Ah.12g060460 Amaranthus hybridus HOM05D009559 ORTHO05D061131 1.6e-132 477.2 368 67.7
Ah.04g157130 Amaranthus hybridus HOM05D009559 ORTHO05D059839 3.7e-121 439.5 269 81.0
Ah.05g174360 Amaranthus hybridus HOM05D009559 ORTHO05D061977 1.4e-112 411.0 307 72.6
Ah.03g144950 Amaranthus hybridus HOM05D009559 ORTHO05D061861 1.2e-111 407.9 231 87.4
Ah.06g186880 Amaranthus hybridus HOM05D001168 ORTHO05D001044 7.2e-101 372.1 541 44.0
Ah.10g025310 Amaranthus hybridus HOM05D009559 ORTHO05D061000 1.8e-96 357.5 478 46.7
Ah.01g010260 Amaranthus hybridus HOM05D009559 ORTHO05D060279 1.0e-94 351.7 295 64.1
Ah.03g148490 Amaranthus hybridus HOM05D009559 ORTHO05D060985 3.1e-88 330.1 293 60.8
Ah.03g146730 Amaranthus hybridus HOM05D009559 ORTHO05D017251 1.4e-75 288.1 528 35.2
Ah.02g119650 Amaranthus hybridus HOM05D009559 ORTHO05D060872 5.7e-74 282.7 414 44.7
Ah.04g157090 Amaranthus hybridus HOM05D000001 ORTHO05D000003 4.8e-73 279.6 306 53.6
Ah.01g010270 Amaranthus hybridus HOM05D009559 ORTHO05D060265 6.5e-70 269.2 216 64.8
Ah.01g009990 Amaranthus hybridus HOM05D009559 ORTHO05D006373 3.3e-69 266.9 147 85.7
Ah.07g198630 Amaranthus hybridus HOM05D009559 ORTHO05D060977 3.6e-68 263.5 193 70.5
Ah.01g010560 Amaranthus hybridus HOM05D009559 ORTHO05D061116 8.9e-67 258.8 189 71.4
Ah.01g010550 Amaranthus hybridus HOM05D009559 ORTHO05D061443 2.0e-55 221.1 158 72.8
Ah.12g060450 Amaranthus hybridus HOM05D009559 ORTHO05D059838 2.1e-52 211.1 179 64.2
Ah.02g122400 Amaranthus hybridus HOM05D009559 ORTHO05D061196 8.9e-51 205.7 130 80.8
Ah.03g144940 Amaranthus hybridus HOM05D009559 ORTHO05D061428 1.1e-43 182.2 105 91.4
Ah.01g012500 Amaranthus hybridus HOM05D009559 ORTHO05D061054 1.1e-21 109.0 116 53.4
EL10Ac4g09233 Beta vulgaris HOM05D012416 ORTHO05D006373 1.1e-19 102.4 252 27.4
Ah.01g013360 Amaranthus hybridus HOM05D009559 ORTHO05D061145 2.6e-18 97.8 104 51.9
AUR62031748 Chenopodium quinoa HOM05D012416 ORTHO05D006373 4.5e-18 97.1 419 24.3
AUR62034621 Chenopodium quinoa HOM05D012416 ORTHO05D006373 7.6e-18 96.3 420 24.5
AUR62025216 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.3e-17 95.5 418 24.4
Ah.10g025060 Amaranthus hybridus HOM05D020495 ORTHO05D017251 1.4e-16 92.0 311 25.4
AUR62042040 Chenopodium quinoa HOM05D012416 ORTHO05D000016 5.4e-16 90.1 448 23.9
AUR62044466 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.6e-15 88.6 330 25.5
EL10Ac3g05991 Beta vulgaris HOM05D015602 ORTHO05D006373 2.7e-15 87.8 194 26.8
EL10Ac4g08685 Beta vulgaris HOM05D015602 ORTHO05D006373 4.6e-15 87.0 191 26.2
AUR62028249 Chenopodium quinoa HOM05D012416 ORTHO05D000016 1.8e-14 85.1 366 24.6
Ah.11g039550 Amaranthus hybridus HOM05D009559 ORTHO05D060127 3.9e-14 84.0 95 40.0
EL10As4g23418 Beta vulgaris HOM05D015602 ORTHO05D006373 1.1e-13 82.4 191 25.7
AUR62043954 Chenopodium quinoa HOM05D005385 ORTHO05D006768 1.9e-13 81.6 401 22.4
AUR62036520 Chenopodium quinoa HOM05D008347 ORTHO05D006373 3.3e-13 80.9 236 29.2
AUR62024387 Chenopodium quinoa HOM05D008347 ORTHO05D006373 4.3e-13 80.5 236 28.8
VMungo0251G1913 Vigna mungo HOM05D008347 ORTHO05D006373 4.3e-13 80.5 171 28.1
AUR62022722 Chenopodium quinoa HOM05D008347 ORTHO05D006373 2.8e-12 77.8 238 28.6
EL10Ac2g03375 Beta vulgaris HOM05D015602 ORTHO05D006373 1.1e-11 75.9 186 26.3
AUR62044346 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.1e-11 75.9 187 29.4
AUR62042611 Chenopodium quinoa HOM05D012416 ORTHO05D006373 3.4e-10 70.9 346 23.4
AUR62044059 Chenopodium quinoa HOM05D012416 ORTHO05D006373 3.4e-10 70.9 346 23.4
AUR62024102 Chenopodium quinoa HOM05D008347 ORTHO05D006373 5.8e-10 70.1 428 23.1
Ah.05g174810 Amaranthus hybridus HOM05D009559 ORTHO05D061784 1.7e-09 68.6 52 65.4
AUR62013905 Chenopodium quinoa HOM05D008347 ORTHO05D006373 8.4e-09 66.2 208 27.4
AUR62035164 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.1e-08 65.9 386 23.3
EL10Ac1g01624 Beta vulgaris HOM05D008347 ORTHO05D006373 2.4e-08 64.7 231 25.1
EL10Ac9g20896 Beta vulgaris HOM05D009474 ORTHO05D006373 1.0e-06 59.3 214 22.4
C07p06990 Brassica napus HOM05D009356 ORTHO05D010353 2.3e-06 58.2 245 21.6
AL9U11180 Arabidopsis lyrata HOM05D003849 ORTHO05D002482 3.0e-06 57.8 154 25.3
AL2G19060 Arabidopsis lyrata HOM05D003849 ORTHO05D002482 3.9e-06 57.4 155 25.8
C02p15580 Brassica napus HOM05D009356 ORTHO05D010353 3.9e-06 57.4 245 21.2
C02p25050 Brassica napus HOM05D009356 ORTHO05D010353 6.7e-06 56.6 245 21.2
VMungo1383G0244 Vigna mungo HOM05D008347 ORTHO05D006373 6.7e-06 56.6 127 26.0
AUR62039811 Chenopodium quinoa HOM05D000047 ORTHO05D000044 8.7e-06 56.2 119 33.6


User provided reference genes

Program Settings