Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g118170 Amaranthus hybridus HOM05D007044 ORTHO05D008981 2.4e-287 991.5 500 100.0
EL10Ac4g09721 Beta vulgaris HOM05D007044 ORTHO05D008981 2.0e-198 696.0 507 69.4
AUR62000601 Chenopodium quinoa HOM05D007044 ORTHO05D008981 2.0e-198 696.0 510 71.8
AUR62006952 Chenopodium quinoa HOM05D007044 ORTHO05D008981 3.1e-194 682.2 510 70.0
Cfa020928 Carpinus fangiana HOM05D007044 ORTHO05D008981 1.1e-164 583.9 511 61.3
TWI75G1760 Tripterygium wilfordii HOM05D007044 ORTHO05D008981 2.8e-163 579.3 510 60.0
Haze_19360 Corylus avellana HOM05D007044 ORTHO05D008981 3.6e-163 578.9 511 60.3
Psat6g111960 Pisum sativum HOM05D007044 ORTHO05D008981 3.2e-159 565.8 505 59.0
TPR.G16624 Trifolium pratense HOM05D007044 ORTHO05D008981 5.4e-159 565.1 493 59.6
Actinidia19938 Actinidia chinensis HOM05D007044 ORTHO05D008981 7.9e-158 561.2 509 59.5
Ca_09906_v3 Cicer arietinum L. HOM05D007044 ORTHO05D008981 5.1e-157 558.5 503 58.6
Manes.13G154300 Manihot esculenta HOM05D007044 ORTHO05D008981 7.4e-156 554.7 504 59.3
Medtr1g077040 Medicago truncatula HOM05D007044 ORTHO05D008981 1.6e-155 553.5 488 59.2
PGR119G1191 Punica granatum HOM05D007044 ORTHO05D008981 3.7e-155 552.4 507 58.0
Lj5g0011072 Lotus japonicus HOM05D007044 ORTHO05D008981 8.1e-155 551.2 500 57.6
TAR381G1118 Trochodendron aralioides HOM05D007044 ORTHO05D008981 8.1e-155 551.2 504 59.1
VMungo0720G2193 Vigna mungo HOM05D007044 ORTHO05D008981 1.4e-154 550.4 492 58.9
Phvul.007G114400 Phaseolus vulgaris HOM05D007044 ORTHO05D008981 4.0e-154 548.9 491 58.0
Ciclev10027575m.g Citrus clementina HOM05D007044 ORTHO05D008981 1.5e-153 547.0 517 58.4
vmacro05323 Vaccinium macrocarpon HOM05D007044 ORTHO05D008981 1.5e-153 547.0 502 57.6
Thecc.01G145800 Theobroma cacao HOM05D007044 ORTHO05D008981 2.0e-153 546.6 506 56.9
Glyma.20G214500 Glycine max HOM05D007044 ORTHO05D008981 2.6e-153 546.2 502 57.8
Lalb_Chr06g0168751 Lupinus albus HOM05D007044 ORTHO05D008981 5.8e-153 545.0 516 56.2
Carub.0005s2331 Capsella rubella HOM05D007044 ORTHO05D008981 6.4e-152 541.6 527 54.3
MELO3C024642.2 Cucumis melo HOM05D007044 ORTHO05D008981 1.1e-151 540.8 506 56.3
GSVIVG01000252001 Vitis vinifera HOM05D007044 ORTHO05D008981 1.4e-151 540.4 507 58.0
Duzib147G1221 Durio zibethinus HOM05D007044 ORTHO05D008981 4.6e-150 535.4 511 56.8
Gohir.A05G375000 Gossypium hirsutum HOM05D007044 ORTHO05D008981 7.9e-150 534.6 506 55.1
Hma1.2p1_0050F.1_g029110 Hydrangea macrophylla HOM05D007044 ORTHO05D008981 7.9e-150 534.6 495 59.0
THA.LOC104827319 Tarenaya hassleriana HOM05D007044 ORTHO05D008981 1.0e-149 534.3 507 55.6
Gorai.012G045900 Gossypium raimondii HOM05D007044 ORTHO05D008981 3.9e-149 532.3 507 55.0
AL5G37940 Arabidopsis lyrata HOM05D007044 ORTHO05D008981 6.7e-149 531.6 525 55.0
Sp5g05990 Schrenkiella parvula HOM05D007044 ORTHO05D008981 1.1e-148 530.8 496 57.1
PSO170G6074 Papaver somniferum HOM05D007044 ORTHO05D008981 2.5e-148 529.6 506 58.3
PSO782G5479 Papaver somniferum HOM05D007044 ORTHO05D008981 7.4e-148 528.1 504 58.5
arahy.Tifrunner.gnm1.ann1.H6ML7T Arachis hypogaea HOM05D007044 ORTHO05D008981 6.2e-147 525.0 513 55.4
AT3G56570 Arabidopsis thaliana HOM05D007044 ORTHO05D008981 1.4e-146 523.9 517 55.1
arahy.Tifrunner.gnm1.ann1.B8MN22 Arachis hypogaea HOM05D007044 ORTHO05D008981 1.8e-146 523.5 517 54.9
ClCG04G002800 Citrullus lanatus HOM05D007044 ORTHO05D008981 3.1e-146 522.7 510 54.7
Aa31LG10G11390 Aethionema arabicum HOM05D007044 ORTHO05D008981 4.0e-146 522.3 510 56.5
Gohir.D04G040700 Gossypium hirsutum HOM05D007044 ORTHO05D008981 5.3e-146 521.9 507 54.2
Sabra04G0082400 Salix brachista HOM05D007044 ORTHO05D008981 3.4e-145 519.2 457 60.8
Sed0003346 Sechium edule HOM05D007044 ORTHO05D008981 2.5e-143 513.1 483 55.7
SGA_v2.0_scaffold13G06483 Striga asiatica HOM05D007044 ORTHO05D008981 7.1e-143 511.5 495 54.5
Aqoxy6G00095 Aquilegia oxysepala HOM05D007044 ORTHO05D008981 6.1e-142 508.4 515 53.6
Dinv05984 Davidia involucrata HOM05D007044 ORTHO05D008981 6.3e-139 498.4 452 60.0
Lj7A490G62 Lonicera japonica HOM05D007044 ORTHO05D008981 1.1e-138 497.7 504 55.2
MBI03_g18677_MAGBIO Magnolia biondii HOM05D007044 ORTHO05D008981 2.4e-138 496.5 499 55.9
HPP92_022004 Vanilla planifolia HOM05D007044 ORTHO05D008981 1.1e-135 487.6 492 54.1
SalBow6G1252 Salvia bowleyana HOM05D007044 ORTHO05D008981 3.2e-135 486.1 515 52.2
Migut.F00913 Erythranthe guttata HOM05D007044 ORTHO05D008981 7.2e-135 485.0 517 53.0
CAN.G10.5 Capsicum annuum HOM05D007044 ORTHO05D008981 4.6e-134 482.3 506 52.8
FAN26G2478 Fragaria x ananassa HOM05D007044 ORTHO05D008981 1.0e-133 481.1 504 51.8
Lsat_1_v5_gn_2_40340 Lactuca sativa HOM05D007044 ORTHO05D008981 3.0e-133 479.6 485 53.4
FAN23G2791 Fragaria x ananassa HOM05D007044 ORTHO05D008981 2.0e-132 476.9 504 52.6
Nitab4.5_0001785g0040 Nicotiana tabacum HOM05D007044 ORTHO05D008981 1.3e-131 474.2 536 50.4
FAN19G0897 Fragaria x ananassa HOM05D007044 ORTHO05D008981 4.8e-131 472.2 506 51.8
FvH4_1g25860 Fragaria vesca HOM05D007044 ORTHO05D008981 3.1e-130 469.5 506 51.4
Os01g0879500 Oryza sativa ssp. japonica HOM05D007044 ORTHO05D008981 4.5e-129 465.7 514 51.4
Zm00001eb366280 Zea mays HOM05D007044 ORTHO05D008981 7.7e-129 464.9 499 50.9
C08p31830 Brassica napus HOM05D007044 ORTHO05D008981 3.8e-128 462.6 513 49.7
Hund07191 Selenicereus undatus HOM05D007044 ORTHO05D008981 8.5e-128 461.5 386 66.3
BraA09t40398Z Brassica rapa HOM05D007044 ORTHO05D008981 9.4e-127 458.0 493 50.9
ATR1136G039 Amborella trichopoda HOM05D007044 ORTHO05D008981 1.6e-126 457.2 545 47.5
BcaC07g39965 Brassica carinata HOM05D007044 ORTHO05D008981 2.1e-126 456.8 514 49.8
Oeu063700.1 Olea europaea HOM05D007044 ORTHO05D008981 4.7e-126 455.7 543 47.5
CSS0017775 Camellia sinensis var. sinensis HOM05D007044 ORTHO05D008981 7.9e-126 454.9 424 57.1
BolC8t50802H Brassica oleracea HOM05D007044 ORTHO05D008981 3.9e-125 452.6 514 49.2
HanXRQChr10g0285851 Helianthus annuus HOM05D007044 ORTHO05D008981 3.7e-123 446.0 432 56.5
A09p49450 Brassica napus HOM05D007044 ORTHO05D008981 5.3e-122 442.2 481 50.9
BcaC07g40141 Brassica carinata HOM05D007044 ORTHO05D008981 2.6e-121 439.9 497 50.1
Sc16g0009910 Simmondsia chinensis HOM05D007044 ORTHO05D008981 1.3e-120 437.6 387 60.5
SEGI_35790 Sequoiadendron giganteum HOM05D007044 ORTHO05D008981 5.5e-119 432.2 534 48.1
MD00G1030500 Malus domestica HOM05D007044 ORTHO05D008981 1.6e-118 430.6 497 48.9
unitig_61.g26193 Utricularia gibba HOM05D007044 ORTHO05D008981 7.4e-116 421.8 522 46.6
CiPaw.15G185700 Carya illinoinensis HOM05D007044 ORTHO05D008981 2.1e-110 403.7 373 57.6
Potri.004G135700 Populus trichocarpa HOM05D007044 ORTHO05D008981 1.4e-109 401.0 382 57.1
Atru.chr3.1445 Acer truncatum HOM05D007044 ORTHO05D008981 1.7e-107 394.0 399 56.4
Hma1.2p1_0050F.1_g029120 Hydrangea macrophylla HOM05D007044 ORTHO05D008981 7.7e-105 385.2 364 59.6
Rhsim10G0120300 Rhododendron simsii HOM05D007044 ORTHO05D008981 8.5e-104 381.7 385 55.1
CARHR166680 Cardamine hirsuta HOM05D007044 ORTHO05D008981 3.2e-103 379.8 423 52.5
Thhalv10006013m.g Eutrema salsugineum HOM05D007044 ORTHO05D008981 5.5e-103 379.0 378 54.5
Nn3g20178 Nelumbo nucifera HOM05D007044 ORTHO05D008981 8.8e-101 371.7 387 54.8
CsaV3_4G029950 Cucumis sativus L. HOM05D007044 ORTHO05D008981 3.7e-99 366.3 369 53.9
SMO169G0173 Selaginella moellendorffii HOM05D007044 ORTHO05D008981 1.1e-98 364.8 487 45.6
ECA240G2444 Erigeron canadensis HOM05D007044 ORTHO05D008981 4.2e-95 352.8 373 51.7
Prupe.4G288100 Prunus persica HOM05D007044 ORTHO05D008981 4.4e-92 342.8 403 48.4
QL10p037675 Quercus lobata HOM05D007044 ORTHO05D008981 1.6e-81 307.8 315 55.2
Eucgr.I00024 Eucalyptus grandis HOM05D007044 ORTHO05D008981 4.6e-81 306.2 317 50.5
Mapoly0010s0148 Marchantia polymorpha HOM05D007044 ORTHO05D008981 5.6e-79 299.3 734 31.3
Pp3c8_4410 Physcomitrium patens HOM05D007044 ORTHO05D008981 5.6e-79 299.3 377 47.2
Glyma.10G176100 Glycine max HOM05D007044 ORTHO05D008981 2.8e-70 270.4 293 51.2
Cpa.g.sc138.45 Carica papaya HOM05D007044 ORTHO05D008981 2.3e-69 267.3 194 67.0
PGSC0003DMG400004247 Solanum tuberosum HOM05D007044 ORTHO05D008981 2.1e-65 254.2 194 62.4
QL10p037666 Quercus lobata HOM05D007044 ORTHO05D008981 1.3e-64 251.5 193 64.2
RcHm_v2.0_Chr3g0485001 Rosa chinensis HOM05D007044 ORTHO05D008981 5.2e-61 239.6 287 46.7
CDE06G0802 Ceratophyllum demersum HOM05D003697 ORTHO05D005452 2.9e-59 233.8 299 48.8
AagrBONN_evm.TU.Sc2ySwM_368.1798 Anthoceros agrestis HOM05D007044 ORTHO05D008981 1.7e-56 224.6 378 37.6
CDE06G2742 Ceratophyllum demersum HOM05D007044 ORTHO05D008981 2.1e-54 217.6 182 58.2
MELO3C033209.2 Cucumis melo HOM05D007044 ORTHO05D008981 4.8e-38 163.3 161 56.5
PRCOL_00000171 Prasinoderma coloniale HOM05D007044 ORTHO05D008981 1.9e-31 141.4 347 31.4
FAN28G0850 Fragaria x ananassa HOM05D007044 ORTHO05D008981 3.7e-30 137.1 220 37.3
MCO15G559 Micromonas commoda HOM05D007044 ORTHO05D008981 3.1e-29 134.0 329 31.9
MCO12G445 Micromonas commoda HOM05D007044 ORTHO05D008981 2.0e-28 131.3 394 29.9
MCO07G433 Micromonas commoda HOM05D007044 ORTHO05D008981 1.4e-26 125.2 505 26.5
CBR_g30110 Chara braunii HOM05D007044 ORTHO05D008981 7.2e-26 122.9 132 47.0
Cre07.g346418 Chlamydomonas reinhardtii HOM05D007044 ORTHO05D008981 3.3e-23 114.0 166 38.0
arahy.Tifrunner.gnm1.ann1.8K57QZ Arachis hypogaea HOM05D001339 ORTHO05D008981 5.0e-19 100.1 137 42.3
Cpa.g.sc138.46 Carica papaya HOM05D007044 ORTHO05D008981 6.7e-16 89.7 224 30.8
Cre03.g164650 Chlamydomonas reinhardtii HOM05D007044 ORTHO05D008981 2.5e-15 87.8 305 27.2
Mapoly0016s0035 Marchantia polymorpha HOM05D005656 ORTHO05D006437 4.5e-12 77.0 314 23.2
arahy.Tifrunner.gnm1.ann1.H6TAT4 Arachis hypogaea HOM05D006665 ORTHO05D008327 1.3e-11 75.5 55 60.0
Pp3c22_6390 Physcomitrium patens HOM05D004224 ORTHO05D006437 4.2e-10 70.5 321 20.9
AagrBONN_evm.TU.Sc2ySwM_228.1763 Anthoceros agrestis HOM05D004224 ORTHO05D006437 1.0e-08 65.9 203 25.6
Zm00001eb347700 Zea mays HOM05D001443 ORTHO05D001352 1.4e-08 65.5 68 51.5
Actinidia16039 Actinidia chinensis HOM05D007044 ORTHO05D008981 5.1e-08 63.5 169 33.7
ATR0564G531 Amborella trichopoda HOM05D005456 ORTHO05D006805 6.7e-08 63.2 194 27.3
SEGI_32636 Sequoiadendron giganteum HOM05D005252 ORTHO05D006788 8.8e-08 62.8 360 25.0
Mapoly0065s0091 Marchantia polymorpha HOM05D005456 ORTHO05D006805 1.1e-07 62.4 175 28.6
PRCOL_00000792 Prasinoderma coloniale HOM05D004224 ORTHO05D028567 1.5e-07 62.0 384 22.7
MCO05G022 Micromonas commoda HOM05D007044 ORTHO05D028567 9.7e-07 59.3 330 23.9
AUR62033372 Chenopodium quinoa HOM05D006557 ORTHO05D008177 1.3e-06 58.9 330 23.6
Atru.chr11.1727 Acer truncatum HOM05D005456 ORTHO05D006805 1.7e-06 58.5 196 27.0
Cfa008936 Carpinus fangiana HOM05D005456 ORTHO05D006805 4.8e-06 57.0 193 23.3
Dinv16685 Davidia involucrata HOM05D005456 ORTHO05D006805 4.8e-06 57.0 319 22.3


User provided reference genes

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