Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g117910 Amaranthus hybridus HOM05D001385 ORTHO05D008760 2.8e-310 1067.8 537 100.0
Ah.02g123480 Amaranthus hybridus HOM05D001385 ORTHO05D008760 2.9e-251 871.7 591 79.7
Ah.13g066910 Amaranthus hybridus HOM05D001385 ORTHO05D008760 1.3e-214 750.0 552 75.9
Ah.10g025350 Amaranthus hybridus HOM05D001385 ORTHO05D008760 9.3e-157 557.8 539 62.3
Ah.05g177810 Amaranthus hybridus HOM05D001385 ORTHO05D002073 5.2e-91 339.3 653 36.8
Ah.02g117390 Amaranthus hybridus HOM05D001385 ORTHO05D008760 3.7e-89 333.2 176 96.6
Ah.05g175550 Amaranthus hybridus HOM05D001385 ORTHO05D008760 2.4e-88 330.5 685 35.3
Ah.08g221340 Amaranthus hybridus HOM05D001385 ORTHO05D008760 3.4e-82 310.1 552 39.3
Ah.10g025260 Amaranthus hybridus HOM05D001385 ORTHO05D008760 2.4e-80 303.9 606 36.8
Ah.02g117400 Amaranthus hybridus HOM05D001385 ORTHO05D008760 1.3e-70 271.6 344 52.3
Ah.02g120850 Amaranthus hybridus HOM05D001385 ORTHO05D008760 4.3e-69 266.5 305 53.1
Ah.07g199140 Amaranthus hybridus HOM05D001385 ORTHO05D008760 5.8e-66 256.1 206 71.4
AUR62040137 Chenopodium quinoa HOM05D001385 ORTHO05D008760 6.0e-55 219.5 390 35.1
Ah.01g010370 Amaranthus hybridus HOM05D001385 ORTHO05D008760 1.1e-53 215.3 343 37.0
AUR62039827 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.9e-45 188.0 335 35.5
Ah.02g120890 Amaranthus hybridus HOM05D001385 ORTHO05D008760 7.4e-45 186.0 139 63.3
EL10Ac6g14499 Beta vulgaris HOM05D001385 ORTHO05D008760 2.8e-44 184.1 594 26.3
EL10Ac7g18151 Beta vulgaris HOM05D001385 ORTHO05D008760 5.0e-41 173.3 406 28.8
EL10Ac1g02060 Beta vulgaris HOM05D001385 ORTHO05D008760 5.1e-38 163.3 376 29.8
EL10Ac7g16607 Beta vulgaris HOM05D001385 ORTHO05D008760 8.7e-38 162.5 539 26.7
EL10Ac1g01824 Beta vulgaris HOM05D001385 ORTHO05D008760 1.1e-37 162.2 365 31.2
AUR62043334 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.1e-37 162.2 432 30.6
EL10Ac5g11714 Beta vulgaris HOM05D000107 ORTHO05D000062 1.5e-37 161.8 437 28.6
AUR62042768 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.2e-36 157.9 415 31.1
AUR62043185 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.2e-36 157.9 415 31.1
EL10Ac9g20910 Beta vulgaris HOM05D001385 ORTHO05D008760 4.1e-35 153.7 365 28.8
AUR62041069 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.1e-32 145.6 308 34.7
EL10Ac5g11862 Beta vulgaris HOM05D001385 ORTHO05D008760 3.6e-31 140.6 440 27.7
EL10Ac2g03907 Beta vulgaris HOM05D001385 ORTHO05D008760 6.7e-30 136.3 388 27.3
EL10Ac8g19807 Beta vulgaris HOM05D001385 ORTHO05D008760 1.1e-29 135.6 388 27.3
AUR62028251 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.0e-29 134.8 268 31.7
EL10Ac4g08894 Beta vulgaris HOM05D001385 ORTHO05D008760 2.6e-29 134.4 383 27.4
EL10Ac9g21092 Beta vulgaris HOM05D001385 ORTHO05D008760 2.6e-29 134.4 456 25.7
EL10Ac6g14099 Beta vulgaris HOM05D001385 ORTHO05D008760 3.3e-29 134.0 361 27.1
EL10Ac1g01131 Beta vulgaris HOM05D001385 ORTHO05D008760 4.4e-29 133.7 361 27.4
EL10Ac1g01188 Beta vulgaris HOM05D001385 ORTHO05D008760 9.7e-29 132.5 388 26.8
EL10Ac4g09023 Beta vulgaris HOM05D001385 ORTHO05D008760 1.3e-28 132.1 388 26.8
EL10Ac1g02023 Beta vulgaris HOM05D001385 ORTHO05D008760 2.8e-28 131.0 370 26.5
AUR62039729 Chenopodium quinoa HOM05D001385 ORTHO05D008760 5.3e-27 126.7 329 29.5
AUR62041104 Chenopodium quinoa HOM05D001385 ORTHO05D008760 5.3e-27 126.7 411 27.0
AUR62034140 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.3e-25 122.1 591 25.2
EL10Ac3g06415 Beta vulgaris HOM05D001385 ORTHO05D008760 5.0e-25 120.2 352 26.7
EL10Ac9g21493 Beta vulgaris HOM05D001385 ORTHO05D004434 6.5e-25 119.8 327 29.4
AUR62010149 Chenopodium quinoa HOM05D001385 ORTHO05D004434 1.1e-24 119.0 454 26.9
AUR62013585 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.4e-24 118.6 338 29.0
AUR62002718 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.2e-24 117.5 444 27.3
AUR62030226 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.2e-24 117.5 331 28.4
AUR62028470 Chenopodium quinoa HOM05D001385 ORTHO05D008760 4.2e-24 117.1 427 26.9
AUR62040146 Chenopodium quinoa HOM05D001385 ORTHO05D008760 7.9e-23 112.8 483 26.3
Hund06374 Selenicereus undatus HOM05D001385 ORTHO05D004434 7.9e-23 112.8 383 27.4
EL10Ac7g17195 Beta vulgaris HOM05D000107 ORTHO05D000062 1.4e-22 112.1 384 24.7
AUR62013950 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.8e-22 111.7 276 29.3
Hund06375 Selenicereus undatus HOM05D001385 ORTHO05D004434 1.3e-20 105.5 296 30.7
AUR62026509 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.7e-20 105.1 568 24.3
AUR62042851 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.2e-20 104.8 270 28.1
AUR62043841 Chenopodium quinoa HOM05D001385 ORTHO05D008760 8.2e-20 102.8 270 29.6
AUR62014303 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.1e-19 102.4 333 28.5
AUR62037120 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.1e-19 100.9 260 32.7
AUR62005475 Chenopodium quinoa HOM05D001385 ORTHO05D004434 4.1e-19 100.5 184 33.2
AUR62016349 Chenopodium quinoa HOM05D001385 ORTHO05D008760 7.0e-19 99.8 205 31.7
Sc13g0007340 Simmondsia chinensis HOM05D001385 ORTHO05D004434 9.1e-19 99.4 258 30.6
AUR62037924 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.6e-18 98.6 305 28.5
AUR62013145 Chenopodium quinoa HOM05D001385 ORTHO05D000378 5.9e-18 96.7 475 26.1
AUR62034766 Chenopodium quinoa HOM05D001385 ORTHO05D008760 5.9e-18 96.7 122 41.0
AUR62036601 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.9e-17 94.4 371 23.7
AUR62013317 Chenopodium quinoa HOM05D004522 ORTHO05D008760 3.8e-17 94.0 181 37.0
AUR62029692 Chenopodium quinoa HOM05D001385 ORTHO05D008760 6.5e-17 93.2 180 30.6
AUR62042068 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.1e-16 92.4 103 40.8
Hund00070 Selenicereus undatus HOM05D001385 ORTHO05D004434 1.9e-16 91.7 328 26.2
EL10Ac4g08867 Beta vulgaris HOM05D001385 ORTHO05D008760 2.1e-15 88.2 275 25.5
EL10Ac8g20048 Beta vulgaris HOM05D000107 ORTHO05D000062 8.0e-15 86.3 173 30.6
EL10Ac4g08961 Beta vulgaris HOM05D000107 ORTHO05D000062 1.4e-14 85.5 173 30.1
EL10Ac3g06245 Beta vulgaris HOM05D001385 ORTHO05D008760 1.8e-14 85.1 173 30.1
AUR62034205 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.6e-13 81.3 548 25.0
AUR62036605 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.6e-13 81.3 167 35.3
EL10Ac4g08959 Beta vulgaris HOM05D001385 ORTHO05D008760 5.7e-13 80.1 126 34.1
AUR62020405 Chenopodium quinoa HOM05D001385 ORTHO05D008760 5.7e-13 80.1 150 34.7
EL10Ac5g12063 Beta vulgaris HOM05D000107 ORTHO05D000062 7.5e-13 79.7 179 29.1
EL10Ac8g19533 Beta vulgaris HOM05D001385 ORTHO05D008760 9.7e-13 79.3 165 32.1
AUR62037359 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.3e-12 79.0 217 29.5
AUR62042540 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.7e-12 78.6 126 35.7
AUR62003191 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.2e-12 78.2 162 32.7
AUR62044135 Chenopodium quinoa HOM05D001385 ORTHO05D008760 6.3e-12 76.6 248 29.8
Sc10g0006250 Simmondsia chinensis HOM05D001385 ORTHO05D008760 1.4e-11 75.5 95 43.2
COL.COLO4_21802 Corchorus olitorius HOM05D001309 ORTHO05D000385 3.1e-11 74.3 249 28.5
AUR62040186 Chenopodium quinoa HOM05D001385 ORTHO05D004434 4.1e-11 73.9 220 28.2
AUR62035309 Chenopodium quinoa HOM05D001385 ORTHO05D008760 5.3e-11 73.6 150 35.3
EL10Ac8g19748 Beta vulgaris HOM05D001385 ORTHO05D008760 7.0e-11 73.2 132 33.3
AUR62041907 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.2e-10 72.4 303 23.4
Sc11g0008180 Simmondsia chinensis HOM05D001385 ORTHO05D008760 2.0e-10 71.6 133 34.6
Hund07770 Selenicereus undatus HOM05D000185 ORTHO05D000105 3.5e-10 70.9 389 26.7
AUR62019603 Chenopodium quinoa HOM05D001385 ORTHO05D008760 4.5e-10 70.5 219 29.7
arahy.Tifrunner.gnm1.ann1.2IZ9JW Arachis hypogaea HOM05D002954 ORTHO05D003353 5.9e-10 70.1 145 28.3
arahy.Tifrunner.gnm1.ann1.H1PTY0 Arachis hypogaea HOM05D002954 ORTHO05D010308 5.9e-10 70.1 145 28.3
AUR62005473 Chenopodium quinoa HOM05D001385 ORTHO05D004434 1.3e-09 68.9 93 35.5
Hund30625 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.3e-09 68.9 142 29.6
COL.COLO4_15867 Corchorus olitorius HOM05D001309 ORTHO05D004434 1.7e-09 68.6 269 27.1
Hund10878 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.9e-09 67.8 149 28.9
Zm00001eb267220 Zea mays HOM05D008576 ORTHO05D000385 2.9e-09 67.8 132 33.3
Zm00001eb380870 Zea mays HOM05D008576 ORTHO05D000385 3.8e-09 67.4 132 34.1
COL.COLO4_15532 Corchorus olitorius HOM05D001309 ORTHO05D000385 5.0e-09 67.0 266 27.1
Hund30796 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.0e-09 67.0 149 29.5
Hund04034 Selenicereus undatus HOM05D004066 ORTHO05D004434 6.5e-09 66.6 149 28.9
Hund13844 Selenicereus undatus HOM05D004066 ORTHO05D004434 6.5e-09 66.6 149 29.5
Hund14776 Selenicereus undatus HOM05D004066 ORTHO05D004434 8.5e-09 66.2 149 29.5
Sc08g0003950 Simmondsia chinensis HOM05D001385 ORTHO05D008760 8.5e-09 66.2 152 31.6
AUR62006161 Chenopodium quinoa HOM05D039261 ORTHO05D008760 1.1e-08 65.9 199 29.6
AUR62042499 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.1e-08 65.9 148 34.5
Hund22617 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.1e-08 65.9 149 29.5
Hund15061 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.5e-08 65.5 149 28.9
Gohir.D04G003250 Gossypium hirsutum HOM05D001309 ORTHO05D000385 1.9e-08 65.1 103 31.1
Hund12908 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.5e-08 64.7 149 28.9
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.2e-08 64.3 155 28.4
MBI09_g15192_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.2e-08 64.3 263 24.0
Hund28976 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.2e-08 64.3 147 29.3
Hund28977 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.2e-08 64.3 147 29.3
Hund29980 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.2e-08 64.3 147 29.3
Hund19649 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.2e-08 63.9 148 29.1
Sc11g0008190 Simmondsia chinensis HOM05D001385 ORTHO05D004434 4.2e-08 63.9 73 45.2
Ah.10g025640 Amaranthus hybridus HOM05D001385 ORTHO05D008760 5.5e-08 63.5 162 33.3
EL10Ac2g03369 Beta vulgaris HOM05D000107 ORTHO05D000062 5.5e-08 63.5 78 33.3
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.2e-08 63.2 155 27.7
Hund04453 Selenicereus undatus HOM05D004066 ORTHO05D004434 7.2e-08 63.2 149 28.9
CSS0004946 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.4e-08 62.8 155 27.7
CSS0011055 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.4e-08 62.8 155 27.7
CSS0017872 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.4e-08 62.8 154 27.9
COL.COLO4_05115 Corchorus olitorius HOM05D001309 ORTHO05D004434 9.4e-08 62.8 124 33.9
Hund30132 Selenicereus undatus HOM05D004066 ORTHO05D004434 9.4e-08 62.8 149 28.2
Hund30727 Selenicereus undatus HOM05D004066 ORTHO05D004434 9.4e-08 62.8 149 28.2
CSS0000023 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.6e-07 62.0 155 27.1
CSS0024690 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.6e-07 62.0 155 27.7
AUR62043798 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.6e-07 62.0 198 27.3
EL10Ac9g21154 Beta vulgaris HOM05D000593 ORTHO05D000562 2.7e-07 61.2 149 29.5
Hund11417 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.7e-07 61.2 306 23.9
AUR62034385 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.6e-07 60.8 211 23.2
CSS0042181 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.7e-07 60.5 155 27.1
Hund01500 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.7e-07 60.5 142 28.2
Hund11364 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.7e-07 60.5 149 28.2
Hund20387 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.7e-07 60.5 118 29.7
Hund24360 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.7e-07 60.5 147 28.6
Hund31264 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.7e-07 60.5 149 28.9
Hund23677 Selenicereus undatus HOM05D004066 ORTHO05D004434 6.1e-07 60.1 149 27.5
Hund26531 Selenicereus undatus HOM05D004066 ORTHO05D004434 6.1e-07 60.1 149 29.5
Gohir.D10G156350 Gossypium hirsutum HOM05D001309 ORTHO05D000385 8.0e-07 59.7 192 25.0
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 8.0e-07 59.7 130 30.8
Hund07415 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.0e-06 59.3 292 25.3
AUR62037756 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.4e-06 58.9 68 48.5
TWI75G0500 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 1.8e-06 58.5 132 27.3
MBI19_g12820_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.3e-06 58.2 128 28.1
AUR62042649 Chenopodium quinoa HOM05D001385 ORTHO05D000062 3.0e-06 57.8 425 22.8
Hund14635 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.0e-06 57.8 103 30.1
EL10Ac4g08702 Beta vulgaris HOM05D001385 ORTHO05D008760 4.0e-06 57.4 128 27.3
EL10Ac9g20863 Beta vulgaris HOM05D001385 ORTHO05D008760 4.0e-06 57.4 194 25.3
CANSAT11G1463 Cannabis sativa HOM05D001309 ORTHO05D000385 4.0e-06 57.4 114 32.5
MBI12_g24830_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.0e-06 57.4 113 29.2
MBI19_g00149_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.0e-06 57.4 98 32.7
AUR62036620 Chenopodium quinoa HOM05D001385 ORTHO05D008760 5.2e-06 57.0 121 32.2
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.2e-06 57.0 282 23.8
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.8e-06 56.6 281 22.4
Hund01655 Selenicereus undatus HOM05D004066 ORTHO05D004434 6.8e-06 56.6 142 28.2
Hund03850 Selenicereus undatus HOM05D004066 ORTHO05D004434 6.8e-06 56.6 142 27.5
CANSAT21G2150 Cannabis sativa HOM05D001309 ORTHO05D000385 8.8e-06 56.2 114 31.6
MBI19_g33997_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.8e-06 56.2 111 27.9
Sopen01g012110 Solanum pennellii HOM05D002954 ORTHO05D003353 8.8e-06 56.2 146 30.1
GSVIVG01024448001 Vitis vinifera HOM05D001309 ORTHO05D000385 8.8e-06 56.2 105 31.4


User provided reference genes

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