Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g116780 Amaranthus hybridus HOM05D004191 ORTHO05D004887 2.3e-102 375.6 187 100.0
EL10Ac5g13057 Beta vulgaris HOM05D004191 ORTHO05D004887 1.2e-98 363.2 187 94.7
Hund11592 Selenicereus undatus HOM05D004191 ORTHO05D004887 3.4e-98 361.7 187 93.0
Cc05_g13280 Coffea canephora HOM05D004191 ORTHO05D004887 5.5e-96 354.4 187 90.9
Duzib093G1201 Durio zibethinus HOM05D004191 ORTHO05D004887 1.0e-94 350.1 187 89.3
Sc22g0000820 Simmondsia chinensis HOM05D004191 ORTHO05D004887 2.3e-94 349.0 187 89.8
PGSC0003DMG400005405 Solanum tuberosum HOM05D004191 ORTHO05D004887 3.9e-94 348.2 187 88.8
COL.COLO4_05062 Corchorus olitorius HOM05D004191 ORTHO05D004887 5.1e-94 347.8 187 89.3
FvH4_3g21920 Fragaria vesca HOM05D004191 ORTHO05D004887 6.7e-94 347.4 187 87.2
FAN16G1028 Fragaria x ananassa HOM05D004191 ORTHO05D004887 6.7e-94 347.4 187 87.2
RcHm_v2.0_Chr5g0037731 Rosa chinensis HOM05D004191 ORTHO05D004887 6.7e-94 347.4 187 87.2
Duzib106G0849 Durio zibethinus HOM05D004191 ORTHO05D004887 8.7e-94 347.1 187 88.2
CAN.G134.12 Capsicum annuum HOM05D004191 ORTHO05D004887 1.1e-93 346.7 187 88.8
MD03G1210500 Malus domestica HOM05D004191 ORTHO05D004887 1.1e-93 346.7 187 87.7
GSVIVG01002004001 Vitis vinifera HOM05D004191 ORTHO05D004887 1.1e-93 346.7 187 88.2
FAN21G0017 Fragaria x ananassa HOM05D004191 ORTHO05D004887 1.5e-93 346.3 187 86.6
Oeu032442.1 Olea europaea HOM05D004191 ORTHO05D004887 1.5e-93 346.3 187 88.2
Peaxi162Scf00082g00016 Petunia axillaris HOM05D004191 ORTHO05D004887 1.5e-93 346.3 187 88.8
FAN25G1832 Fragaria x ananassa HOM05D004191 ORTHO05D004887 1.9e-93 345.9 187 86.1
Prupe.4G204700 Prunus persica HOM05D004191 ORTHO05D004887 1.9e-93 345.9 187 86.6
Thecc.05G140700 Theobroma cacao HOM05D004191 ORTHO05D004887 1.9e-93 345.9 187 88.2
Gohir.A09G118400 Gossypium hirsutum HOM05D004191 ORTHO05D004887 2.5e-93 345.5 187 87.7
Gohir.D09G115300 Gossypium hirsutum HOM05D004191 ORTHO05D004887 2.5e-93 345.5 187 87.7
Gorai.006G132900 Gossypium raimondii HOM05D004191 ORTHO05D004887 2.5e-93 345.5 187 87.7
Nitab4.5_0002838g0150 Nicotiana tabacum HOM05D004191 ORTHO05D004887 2.5e-93 345.5 187 88.2
MBI02_g10101_MAGBIO Magnolia biondii HOM05D004191 ORTHO05D004887 3.3e-93 345.1 187 88.2
MD11G1225200 Malus domestica HOM05D004191 ORTHO05D004887 3.3e-93 345.1 187 87.2
Nitab4.5_0005420g0050 Nicotiana tabacum HOM05D004191 ORTHO05D004887 3.3e-93 345.1 187 87.7
MELO3C018102.2 Cucumis melo HOM05D004191 ORTHO05D004887 4.3e-93 344.7 187 87.2
CsaV3_3G023130 Cucumis sativus L. HOM05D004191 ORTHO05D004887 4.3e-93 344.7 187 87.2
Dinv40713 Davidia involucrata HOM05D004191 ORTHO05D004887 4.3e-93 344.7 187 88.8
QL08p013180 Quercus lobata HOM05D004191 ORTHO05D004887 4.3e-93 344.7 186 88.7
Solyc10g006490.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 4.3e-93 344.7 187 88.2
SGA_v2.0_scaffold416G51230 Striga asiatica HOM05D004191 ORTHO05D004887 4.3e-93 344.7 187 87.2
TAR371G0103 Trochodendron aralioides HOM05D004191 ORTHO05D004887 4.3e-93 344.7 187 87.7
PSO675G8300 Papaver somniferum HOM05D004191 ORTHO05D004887 5.7e-93 344.4 187 87.7
CiPaw.12G126500 Carya illinoinensis HOM05D004191 ORTHO05D004887 7.4e-93 344.0 187 87.7
Potri.001G418400 Populus trichocarpa HOM05D004191 ORTHO05D004887 7.4e-93 344.0 187 88.2
Solyc01g096530.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 7.4e-93 344.0 187 87.7
CiPaw.11G184500 Carya illinoinensis HOM05D004191 ORTHO05D004887 9.6e-93 343.6 187 87.7
Lj1A865T18 Lonicera japonica HOM05D004191 ORTHO05D004887 9.6e-93 343.6 187 87.7
Sabra16G0284100 Salix brachista HOM05D004191 ORTHO05D004887 9.6e-93 343.6 187 87.7
Hma1.2p1_0049F.1_g028640 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 1.6e-92 342.8 186 87.1
ATR0609G026 Amborella trichopoda HOM05D004191 ORTHO05D004887 2.1e-92 342.4 187 87.2
CSS0034391 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 2.1e-92 342.4 187 88.8
Sopen01g040260 Solanum pennellii HOM05D004191 ORTHO05D004887 2.1e-92 342.4 187 87.7
HPP92_013205 Vanilla planifolia HOM05D001003 ORTHO05D004887 2.1e-92 342.4 186 88.2
Rhsim12G0150700 Rhododendron simsii HOM05D004191 ORTHO05D004887 2.8e-92 342.0 187 86.6
SalBow7G2717 Salvia bowleyana HOM05D004191 ORTHO05D004887 2.8e-92 342.0 187 86.1
Actinidia34670 Actinidia chinensis HOM05D004191 ORTHO05D004887 3.7e-92 341.7 187 88.8
Ciclev10009626m.g Citrus clementina HOM05D004191 ORTHO05D004887 3.7e-92 341.7 187 86.6
Lalb_Chr19g0134771 Lupinus albus HOM05D004191 ORTHO05D004887 3.7e-92 341.7 187 86.6
Manes.03G123300 Manihot esculenta HOM05D004191 ORTHO05D004887 3.7e-92 341.7 183 88.5
Cpa.g.sc97.62 Carica papaya HOM05D004191 ORTHO05D004887 4.8e-92 341.3 187 86.6
PGR031G0276 Punica granatum HOM05D004191 ORTHO05D004887 4.8e-92 341.3 184 88.0
Sed0000628 Sechium edule HOM05D004191 ORTHO05D004887 4.8e-92 341.3 187 86.6
TAR626G0300 Trochodendron aralioides HOM05D004191 ORTHO05D004887 4.8e-92 341.3 187 86.6
HanXRQChr02g0054141 Helianthus annuus HOM05D004191 ORTHO05D004887 6.2e-92 340.9 187 86.6
CSS0028201 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 8.2e-92 340.5 187 88.2
ECA236G4841 Erigeron canadensis HOM05D004191 ORTHO05D004887 8.2e-92 340.5 187 85.6
Aqoxy4G00334 Aquilegia oxysepala HOM05D004191 ORTHO05D004887 1.1e-91 340.1 187 86.1
Oeu007633.1 Olea europaea HOM05D004191 ORTHO05D004887 1.4e-91 339.7 196 84.7
vmacro16476 Vaccinium macrocarpon HOM05D004191 ORTHO05D004887 1.4e-91 339.7 187 86.1
Eucgr.F03430 Eucalyptus grandis HOM05D004191 ORTHO05D004887 1.8e-91 339.3 185 87.0
arahy.Tifrunner.gnm1.ann1.HY89VY Arachis hypogaea HOM05D004191 ORTHO05D004887 2.4e-91 339.0 187 86.1
CANSAT80G0944 Cannabis sativa HOM05D004191 ORTHO05D004887 2.4e-91 339.0 187 85.6
Lsat_1_v5_gn_7_108481 Lactuca sativa HOM05D004191 ORTHO05D004887 2.4e-91 339.0 187 85.6
Lj3g0027602 Lotus japonicus HOM05D004191 ORTHO05D004887 3.1e-91 338.6 187 85.6
PSO170G1932 Papaver somniferum HOM05D004191 ORTHO05D004887 3.1e-91 338.6 187 86.6
FAN11G1314 Fragaria x ananassa HOM05D004191 ORTHO05D004887 4.1e-91 338.2 200 81.5
arahy.Tifrunner.gnm1.ann1.B9KZG1 Arachis hypogaea HOM05D004191 ORTHO05D004887 5.3e-91 337.8 187 86.1
Eucgr.F00980 Eucalyptus grandis HOM05D004191 ORTHO05D004887 5.3e-91 337.8 187 86.1
Sed0012224 Sechium edule HOM05D004191 ORTHO05D004887 5.3e-91 337.8 187 85.6
Ca_18852_v3 Cicer arietinum L. HOM05D004191 ORTHO05D004887 9.0e-91 337.0 187 86.1
Lalb_Chr03g0030141 Lupinus albus HOM05D004191 ORTHO05D004887 9.0e-91 337.0 187 85.0
PGR083G1136 Punica granatum HOM05D004191 ORTHO05D004887 9.0e-91 337.0 193 85.0
TWI39G0061 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 9.0e-91 337.0 187 84.5
Os03g0402000 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 1.2e-90 336.7 186 85.5
Os07g0642300 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 1.2e-90 336.7 186 85.5
Zm00001eb067130 Zea mays HOM05D004191 ORTHO05D004887 2.0e-90 335.9 183 86.3
MSTRG.12958 Avicennia marina HOM05D004191 ORTHO05D004887 2.6e-90 335.5 187 85.0
Phvul.011G139700 Phaseolus vulgaris HOM05D004191 ORTHO05D004887 2.6e-90 335.5 187 85.0
Zm00001eb433090 Zea mays HOM05D004191 ORTHO05D004887 2.6e-90 335.5 183 85.8
Migut.H01854 Erythranthe guttata HOM05D004191 ORTHO05D004887 3.4e-90 335.1 187 84.5
Sc15g0001730 Simmondsia chinensis HOM05D004191 ORTHO05D004887 3.4e-90 335.1 187 87.2
Medtr4g081170 Medicago truncatula HOM05D004191 ORTHO05D004887 4.5e-90 334.7 187 85.6
THA.LOC104799884 Tarenaya hassleriana HOM05D004191 ORTHO05D004887 4.5e-90 334.7 187 84.5
TPR.G25893 Trifolium pratense HOM05D004191 ORTHO05D004887 4.5e-90 334.7 187 85.6
ATR0109G002 Amborella trichopoda HOM05D004191 ORTHO05D004887 5.8e-90 334.3 187 85.0
VMungo1127G0852 Vigna mungo HOM05D004191 ORTHO05D004887 5.8e-90 334.3 187 84.5
CAN.G1110.10 Capsicum annuum HOM05D004191 ORTHO05D004887 7.6e-90 334.0 201 82.1
AL8G30180 Arabidopsis lyrata HOM05D004191 ORTHO05D004887 1.0e-89 333.6 187 85.0
Glyma.06G269400 Glycine max HOM05D004191 ORTHO05D004887 1.3e-89 333.2 187 84.0
Glyma.12G135200 Glycine max HOM05D004191 ORTHO05D004887 1.3e-89 333.2 187 84.0
Aa31LG3G10650 Aethionema arabicum HOM05D004191 ORTHO05D004887 1.7e-89 332.8 187 85.6
AT5G54750 Arabidopsis thaliana HOM05D004191 ORTHO05D004887 1.7e-89 332.8 187 85.0
MSTRG.6892 Avicennia marina HOM05D004191 ORTHO05D004887 1.7e-89 332.8 187 84.5
Carub.0008s1502 Capsella rubella HOM05D004191 ORTHO05D004887 2.2e-89 332.4 187 85.0
BcaB07g31034 Brassica carinata HOM05D004191 ORTHO05D004887 2.9e-89 332.0 187 85.0
A09p20070 Brassica napus HOM05D004191 ORTHO05D004887 2.9e-89 332.0 187 85.0
C09p25460 Brassica napus HOM05D004191 ORTHO05D004887 2.9e-89 332.0 187 85.0
BraA09t37620Z Brassica rapa HOM05D004191 ORTHO05D004887 2.9e-89 332.0 187 85.0
CARHR268090 Cardamine hirsuta HOM05D004191 ORTHO05D004887 2.9e-89 332.0 187 85.0
Hund24114 Selenicereus undatus HOM05D004191 ORTHO05D004887 3.8e-89 331.6 211 80.1
Sopen10g002440 Solanum pennellii HOM05D004191 ORTHO05D004887 3.8e-89 331.6 206 79.6
SGA_v2.0_scaffold24G10288 Striga asiatica HOM05D004191 ORTHO05D004887 3.8e-89 331.6 187 83.4
CDE02G0163 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 5.0e-89 331.3 187 84.0
Thhalv10019192m.g Eutrema salsugineum HOM05D004191 ORTHO05D004887 5.0e-89 331.3 187 84.5
SpUn0117_0020 Schrenkiella parvula HOM05D004191 ORTHO05D004887 8.4e-89 330.5 187 84.5
TPR.G24299 Trifolium pratense HOM05D004191 ORTHO05D004887 8.4e-89 330.5 186 84.9
Medtr8g027700 Medicago truncatula HOM05D004191 ORTHO05D004887 1.9e-88 329.3 187 84.5
arahy.Tifrunner.gnm1.ann1.T6DWBF Arachis hypogaea HOM05D004191 ORTHO05D004887 3.2e-88 328.6 187 84.0
Migut.M01809 Erythranthe guttata HOM05D004191 ORTHO05D004887 3.2e-88 328.6 181 84.5
PSO782G4612 Papaver somniferum HOM05D004191 ORTHO05D004887 4.2e-88 328.2 203 79.8
Sp4g10480 Schrenkiella parvula HOM05D004191 ORTHO05D004887 5.5e-88 327.8 187 83.4
TWI38G1569 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 7.9e-87 323.9 208 76.9
unitig_0.g2386 Utricularia gibba HOM05D004191 ORTHO05D004887 5.1e-86 321.2 183 83.1
BolC9t55449H Brassica oleracea HOM05D004191 ORTHO05D004887 1.1e-85 320.1 206 76.7
ClCG05G014740 Citrullus lanatus HOM05D004191 ORTHO05D004887 1.9e-85 319.3 241 67.6
Manes.15G076000 Manihot esculenta HOM05D004191 ORTHO05D004887 2.2e-84 315.8 184 79.3
Lsat_1_v5_gn_5_5821 Lactuca sativa HOM05D004191 ORTHO05D004887 1.7e-81 306.2 173 82.1
Eucgr.F00978 Eucalyptus grandis HOM05D004191 ORTHO05D004887 2.2e-81 305.8 169 86.4
Mapoly0006s0106 Marchantia polymorpha HOM05D004191 ORTHO05D004887 6.5e-81 304.3 181 77.3
Nn1g08677 Nelumbo nucifera HOM05D004191 ORTHO05D004887 8.5e-81 303.9 178 82.0
AagrBONN_evm.TU.Sc2ySwM_344.5600 Anthoceros agrestis HOM05D004191 ORTHO05D004887 4.2e-80 301.6 181 77.3
AagrBONN_evm.TU.Sc2ySwM_344.5601 Anthoceros agrestis HOM05D004191 ORTHO05D004887 4.2e-80 301.6 181 77.3
AagrBONN_evm.TU.Sc2ySwM_362.1587 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.4e-78 296.6 181 75.7
AagrBONN_evm.TU.Sc2ySwM_344.5599 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.5e-77 293.1 171 79.5
Peaxi162Scf01434g00020 Petunia axillaris HOM05D004191 ORTHO05D004887 1.5e-77 293.1 187 79.7
SMO165G0074 Selaginella moellendorffii HOM05D004191 ORTHO05D004887 2.5e-77 292.4 181 74.0
AUR62039960 Chenopodium quinoa HOM05D004191 ORTHO05D004887 1.7e-76 289.7 148 95.3
Nitab4.5_0002342g0090 Nicotiana tabacum HOM05D004191 ORTHO05D004887 3.7e-76 288.5 187 76.5
CBR_g9060 Chara braunii HOM05D004191 ORTHO05D004887 1.4e-75 286.6 181 73.5
Nitab4.5_0002229g0200 Nicotiana tabacum HOM05D004191 ORTHO05D004887 9.1e-75 283.9 187 75.9
Pp3c6_29730 Physcomitrium patens HOM05D004191 ORTHO05D004887 4.5e-74 281.6 180 72.2
Hma1.2p1_0774F.1_g216345 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 5.9e-74 281.2 159 83.6
BcaB07g30600 Brassica carinata HOM05D004191 ORTHO05D004887 6.5e-73 277.7 186 75.3
arahy.Tifrunner.gnm1.ann1.N3PQ25 Arachis hypogaea HOM05D004191 ORTHO05D004887 1.4e-72 276.6 187 73.3
BcaC04g21960 Brassica carinata HOM05D004191 ORTHO05D004887 3.6e-71 271.9 154 83.8
AUR62007507 Chenopodium quinoa HOM05D004191 ORTHO05D004887 6.1e-71 271.2 158 84.8
Dinv22301 Davidia involucrata HOM05D004191 ORTHO05D004887 7.9e-71 270.8 149 86.6
Cpa.g.sc2.173 Carica papaya HOM05D004191 ORTHO05D004887 5.7e-69 264.6 214 60.7
Peaxi162Scf01475g00001 Petunia axillaris HOM05D004191 ORTHO05D004887 7.4e-69 264.2 187 71.7
Peaxi162Scf08257g00003 Petunia axillaris HOM05D004191 ORTHO05D004887 8.8e-62 240.7 187 66.8
Cre03.g145607 Chlamydomonas reinhardtii HOM05D004191 ORTHO05D004887 4.4e-61 238.4 171 63.7
PGSC0003DMG400029125 Solanum tuberosum HOM05D004191 ORTHO05D004887 1.8e-59 233.0 187 65.2
Sp2g07630 Schrenkiella parvula HOM05D004191 ORTHO05D004887 1.5e-53 213.4 124 82.3
AagrBONN_evm.TU.Sc2ySwM_362.1580 Anthoceros agrestis HOM05D004191 ORTHO05D004887 2.6e-53 212.6 127 76.4
Cfa020410 Carpinus fangiana HOM05D004191 ORTHO05D004887 7.7e-50 201.1 103 89.3
PRCOL_00004686 Prasinoderma coloniale HOM05D004191 ORTHO05D004887 7.7e-50 201.1 167 55.7
AUR62030012 Chenopodium quinoa HOM05D004191 ORTHO05D004887 6.5e-49 198.0 181 62.4
MCO14G457 Micromonas commoda HOM05D004191 ORTHO05D004887 7.2e-48 194.5 165 55.2
COL.COLO4_37956 Corchorus olitorius HOM05D004191 ORTHO05D004887 6.1e-47 191.4 98 88.8
Psat7g161320 Pisum sativum HOM05D004191 ORTHO05D004887 6.8e-46 188.0 139 66.2
TWI38G1856 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 7.5e-45 184.5 103 80.6
CDE05G2537 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 9.8e-45 184.1 106 82.1
SEGI_28528 Sequoiadendron giganteum HOM05D004191 ORTHO05D004887 1.1e-43 180.6 98 84.7
Nn5g28123 Nelumbo nucifera HOM05D004191 ORTHO05D004887 5.4e-35 151.8 85 87.1
HanXRQChr11g0332951 Helianthus annuus HOM05D004191 ORTHO05D004887 1.4e-30 137.1 135 59.3
Pp3c2_32190 Physcomitrium patens HOM05D004191 ORTHO05D004887 2.0e-21 106.7 68 69.1
COL.COLO4_37955 Corchorus olitorius HOM05D004191 ORTHO05D004887 1.6e-15 87.0 52 82.7
Cfa020409 Carpinus fangiana HOM05D004191 ORTHO05D004887 4.7e-15 85.5 52 78.8
Actinidia19733 Actinidia chinensis HOM05D004191 ORTHO05D004887 5.2e-14 82.0 41 90.2
Haze_09622 Corylus avellana HOM05D004191 ORTHO05D004887 3.4e-13 79.3 49 77.6
Ah.07g199550 Amaranthus hybridus HOM05D004191 ORTHO05D004887 5.8e-13 78.6 41 90.2
Ah.12g056770 Amaranthus hybridus HOM05D004191 ORTHO05D004887 9.9e-13 77.8 68 58.8
Rhsim01G0090000 Rhododendron simsii HOM05D004191 ORTHO05D004887 3.7e-12 75.9 92 48.9
Ah.07g199480 Amaranthus hybridus HOM05D004191 ORTHO05D060174 6.4e-12 75.1 39 87.2
Haze_09618 Corylus avellana HOM05D004191 ORTHO05D004887 1.6e-10 70.5 45 73.3
Medtr4g027400 Medicago truncatula HOM05D004191 ORTHO05D004887 7.8e-10 68.2 47 70.2


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