Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g115970 Amaranthus hybridus HOM05D000045 ORTHO05D011949 3.1e-69 265.0 132 100.0
Ah.03g144600 Amaranthus hybridus HOM05D000045 ORTHO05D000067 1.2e-68 263.1 131 99.2
Ah.14g083490 Amaranthus hybridus HOM05D000045 ORTHO05D000067 7.6e-68 260.4 131 97.7
Ah.16g106930 Amaranthus hybridus HOM05D000045 ORTHO05D011949 9.9e-68 260.0 131 97.7
Ah.12g062020 Amaranthus hybridus HOM05D000045 ORTHO05D000067 1.3e-67 259.6 131 97.7
Ah.13g070750 Amaranthus hybridus HOM05D000045 ORTHO05D011949 5.4e-66 254.2 131 96.2
Ah.03g143780 Amaranthus hybridus HOM05D000045 ORTHO05D011949 1.6e-65 252.7 131 96.2
Ah.14g080670 Amaranthus hybridus HOM05D000045 ORTHO05D000067 3.0e-64 248.4 131 95.4
Ah.08g223460 Amaranthus hybridus HOM05D000045 ORTHO05D000067 1.3e-59 233.0 131 90.1
Ah.06g187650 Amaranthus hybridus HOM05D000045 ORTHO05D011949 9.0e-53 210.3 115 93.0
Ah.05g177260 Amaranthus hybridus HOM05D000045 ORTHO05D011949 1.0e-48 196.8 113 88.5
Ah.11g042440 Amaranthus hybridus HOM05D000045 ORTHO05D011949 8.7e-48 193.7 108 89.8
Ah.05g177270 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.2e-33 146.7 83 88.0
Ah.06g184360 Amaranthus hybridus HOM05D000045 ORTHO05D011949 8.7e-32 140.6 77 90.9
Ah.09g229530 Amaranthus hybridus HOM05D001854 ORTHO05D001800 1.0e-24 117.1 87 73.6
AUR62044420 Chenopodium quinoa HOM05D000045 ORTHO05D011949 1.8e-24 116.3 125 48.8
AUR62009197 Chenopodium quinoa HOM05D000045 ORTHO05D011949 2.3e-24 115.9 125 49.6
AUR62003871 Chenopodium quinoa HOM05D000045 ORTHO05D000067 6.7e-24 114.4 125 48.8
AUR62033390 Chenopodium quinoa HOM05D000045 ORTHO05D011949 8.8e-24 114.0 125 48.8
AUR62020737 Chenopodium quinoa HOM05D000045 ORTHO05D011949 9.7e-23 110.5 125 48.0
AUR62013877 Chenopodium quinoa HOM05D000045 ORTHO05D000067 1.3e-22 110.2 130 47.7
AUR62008235 Chenopodium quinoa HOM05D000045 ORTHO05D000067 2.2e-22 109.4 130 46.9
AUR62042615 Chenopodium quinoa HOM05D000045 ORTHO05D000067 1.1e-21 107.1 125 46.4
AUR62003731 Chenopodium quinoa HOM05D000045 ORTHO05D000067 3.1e-21 105.5 130 46.2
EL10Ac5g10962 Beta vulgaris HOM05D000045 ORTHO05D011445 6.9e-21 104.4 128 43.0
AUR62038308 Chenopodium quinoa HOM05D000045 ORTHO05D011949 9.1e-21 104.0 130 46.2
EL10Ac1g00980 Beta vulgaris HOM05D000045 ORTHO05D011445 3.4e-20 102.1 129 43.4
EL10Ac6g14766 Beta vulgaris HOM05D020313 ORTHO05D011949 5.5e-18 94.7 127 38.6
EL10Ac9g22505 Beta vulgaris HOM05D000045 ORTHO05D000067 5.5e-18 94.7 129 41.9
AUR62003777 Chenopodium quinoa HOM05D000045 ORTHO05D011949 9.4e-18 94.0 125 44.8
AUR62015984 Chenopodium quinoa HOM05D000045 ORTHO05D000067 1.6e-17 93.2 129 40.3
EL10As4g23455 Beta vulgaris HOM05D000045 ORTHO05D023375 2.3e-16 89.4 129 40.3
AUR62034392 Chenopodium quinoa HOM05D000045 ORTHO05D011949 3.0e-16 89.0 123 42.3
AUR62014678 Chenopodium quinoa HOM05D001704 ORTHO05D001605 2.0e-15 86.3 123 40.7
AUR62034337 Chenopodium quinoa HOM05D000045 ORTHO05D000067 2.6e-15 85.9 131 38.2
SGA_v2.0_scaffold232G43503 Striga asiatica HOM05D000045 ORTHO05D000067 2.6e-15 85.9 124 41.1
AUR62029067 Chenopodium quinoa HOM05D000045 ORTHO05D000067 4.4e-15 85.1 130 40.0
AUR62033960 Chenopodium quinoa HOM05D000045 ORTHO05D000067 5.7e-15 84.7 128 40.6
AUR62024627 Chenopodium quinoa HOM05D000045 ORTHO05D011949 9.7e-15 84.0 99 48.5
AUR62035367 Chenopodium quinoa HOM05D000045 ORTHO05D000067 9.7e-15 84.0 131 36.6
AUR62006821 Chenopodium quinoa HOM05D000045 ORTHO05D000067 2.2e-14 82.8 99 47.5
AUR62042707 Chenopodium quinoa HOM05D000045 ORTHO05D011949 2.2e-14 82.8 99 47.5
EL10Ac4g08568 Beta vulgaris HOM05D000045 ORTHO05D000067 2.8e-14 82.4 124 39.5
AUR62027644 Chenopodium quinoa HOM05D000045 ORTHO05D011949 1.3e-11 73.6 129 34.1
AUR62034268 Chenopodium quinoa HOM05D000045 ORTHO05D000067 1.9e-10 69.7 128 39.1
AUR62043517 Chenopodium quinoa HOM05D000045 ORTHO05D011949 6.1e-09 64.7 71 47.9
AUR62030618 Chenopodium quinoa HOM05D000045 ORTHO05D000067 1.8e-08 63.2 71 47.9
AUR62040034 Chenopodium quinoa HOM05D000045 ORTHO05D011949 5.2e-08 61.6 70 47.1
AUR62006830 Chenopodium quinoa HOM05D000045 ORTHO05D000067 6.7e-08 61.2 46 58.7
AUR62034038 Chenopodium quinoa HOM05D000045 ORTHO05D000067 6.7e-08 61.2 46 58.7
AUR62035717 Chenopodium quinoa HOM05D000045 ORTHO05D000067 6.7e-08 61.2 46 58.7
AUR62029711 Chenopodium quinoa HOM05D000045 ORTHO05D000067 8.8e-08 60.8 70 48.6
AUR62008862 Chenopodium quinoa HOM05D000045 ORTHO05D011949 2.6e-07 59.3 70 48.6
Ah.10g025990 Amaranthus hybridus HOM05D020313 ORTHO05D023375 4.4e-07 58.5 124 33.9
AUR62035340 Chenopodium quinoa HOM05D020313 ORTHO05D011949 4.4e-07 58.5 102 38.2
AUR62015687 Chenopodium quinoa HOM05D000045 ORTHO05D000067 9.7e-07 57.4 52 51.9
Os12g0160900 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 9.7e-07 57.4 129 29.5
Hund04144 Selenicereus undatus HOM05D000045 ORTHO05D000695 1.3e-06 57.0 112 29.5
HPP92_016315 Vanilla planifolia HOM05D000045 ORTHO05D000067 6.3e-06 54.7 112 30.4


User provided reference genes

Program Settings